FFCP PHASE1:Hg19::chr4:77928601..77928612,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77928601..77928612,- | |||
|coexpression_cluster_id=C1380 | |||
|description=CAGE_peak_at_chr4:77928601..77928612,- | |description=CAGE_peak_at_chr4:77928601..77928612,- | ||
|id=chr4:77928601..77928612,- | |id=chr4:77928601..77928612,- | ||
|ontology_enrichment_celltype=CL:0000766!5.31e-24!76;CL:0002057!1.39e-22!42;CL:0000839!1.04e-21!70;CL:0000557!2.95e-21!71;CL:0000860!1.59e-20!45;CL:0002194!6.68e-20!63;CL:0000576!6.68e-20!63;CL:0000040!6.68e-20!63;CL:0000559!6.68e-20!63;CL:0002009!5.34e-19!65;CL:0000738!1.29e-18!140;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0000037!7.47e-15!172;CL:0000566!7.47e-15!172;CL:0002087!9.07e-14!119;CL:0002031!2.82e-13!124;CL:0000988!3.08e-13!182;CL:0002032!3.18e-11!165;CL:0000837!3.18e-11!165;CL:1000413!5.00e-10!9;CL:0002544!2.95e-08!6;CL:0000048!6.21e-08!430;CL:0000134!1.36e-07!358;CL:0000723!1.49e-07!436;CL:0000034!1.70e-07!444;CL:0000767!3.69e-07!3;CL:0000071!3.80e-07!18;CL:0002546!3.80e-07!18;CL:0002320!3.99e-07!365;CL:0000451!4.03e-07!10 | |ontology_enrichment_celltype=CL:0000766!5.31e-24!76;CL:0002057!1.39e-22!42;CL:0000839!1.04e-21!70;CL:0000557!2.95e-21!71;CL:0000860!1.59e-20!45;CL:0002194!6.68e-20!63;CL:0000576!6.68e-20!63;CL:0000040!6.68e-20!63;CL:0000559!6.68e-20!63;CL:0002009!5.34e-19!65;CL:0000738!1.29e-18!140;CL:0000763!2.75e-15!112;CL:0000049!2.75e-15!112;CL:0000037!7.47e-15!172;CL:0000566!7.47e-15!172;CL:0002087!9.07e-14!119;CL:0002031!2.82e-13!124;CL:0000988!3.08e-13!182;CL:0002032!3.18e-11!165;CL:0000837!3.18e-11!165;CL:1000413!5.00e-10!9;CL:0002544!2.95e-08!6;CL:0000048!6.21e-08!430;CL:0000134!1.36e-07!358;CL:0000723!1.49e-07!436;CL:0000034!1.70e-07!444;CL:0000767!3.69e-07!3;CL:0000071!3.80e-07!18;CL:0002546!3.80e-07!18;CL:0002320!3.99e-07!365;CL:0000451!4.03e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000767;1.21e-46;3!CL:0000097;1.82e-28;5!CL:0000094;5.58e-18;8!CL:0000037;1.31e-16;1!CL:0001024;1.31e-16;1!CL:0000222;2.25e-16;1!CL:0000163;3.89e-16;9!CL:0000081;2.95e-13;11!CL:0000766;1.71e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.21e-46,3;CL:0000097,1.74e-28,5;CL:0002028,1.74e-28,5;CL:0000094,5.58e-18,8;CL:0001024,1.41e-16,1;CL:0000766,2.77e-16,72;CL:0000163,3.80e-16,9;CL:0000081,2.95e-13,11;CL:0000763,1.22e-10,108;CL:0000049,1.22e-10,108;CL:0000738,2.87e-10,136;CL:0000037,6.02e-10,168;CL:0000988,2.18e-09,177;CL:0000839,4.96e-08,66;CL:0000557,6.58e-08,67;CL:0002032,7.23e-07,161;CL:0000837,7.23e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.28e-24!102;UBERON:0003061!7.28e-24!102;UBERON:0002193!1.07e-21!112;UBERON:0002371!2.15e-20!80;UBERON:0003081!5.79e-20!216;UBERON:0001474!3.32e-18!86;UBERON:0002405!3.28e-14!115;UBERON:0004765!6.44e-14!101;UBERON:0001434!6.44e-14!101;UBERON:0002204!1.52e-10!167;UBERON:0003915!5.00e-10!9;UBERON:0004700!5.00e-10!9;UBERON:0001917!5.00e-10!9;UBERON:0004535!1.42e-07!110;UBERON:0002384!2.70e-07!375;UBERON:0001009!3.64e-07!113;UBERON:0001986!3.80e-07!18;UBERON:0004638!3.80e-07!18;UBERON:0004852!3.80e-07!18 | |ontology_enrichment_uberon=UBERON:0002390!7.28e-24!102;UBERON:0003061!7.28e-24!102;UBERON:0002193!1.07e-21!112;UBERON:0002371!2.15e-20!80;UBERON:0003081!5.79e-20!216;UBERON:0001474!3.32e-18!86;UBERON:0002405!3.28e-14!115;UBERON:0004765!6.44e-14!101;UBERON:0001434!6.44e-14!101;UBERON:0002204!1.52e-10!167;UBERON:0003915!5.00e-10!9;UBERON:0004700!5.00e-10!9;UBERON:0001917!5.00e-10!9;UBERON:0004535!1.42e-07!110;UBERON:0002384!2.70e-07!375;UBERON:0001009!3.64e-07!113;UBERON:0001986!3.80e-07!18;UBERON:0004638!3.80e-07!18;UBERON:0004852!3.80e-07!18 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-09,76;UBERON:0001474,1.29e-08,82;UBERON:0004765,8.21e-08,90;UBERON:0002405,1.51e-07,93;UBERON:0002390,3.88e-07,98;UBERON:0003061,3.88e-07,98;UBERON:0001434,5.50e-07,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,3.14691421479123,3.0706351847777,3.2511385896376,0,0,0,0,0,2.34880351467878,0,0,1.95309783644267,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0,0.945928919554341,0.344745680736619,0.645484683583826,5.41705946377367,0,0,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0,0.212604299965044,0.628975936525128,0,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.238490624305342,0.571994910780128,1.11437250398869,0.39752481473341,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0.835979866147242,0,0,0,0,0,0,0.735326160691737,0.81014194788176,0.446498641420399,0,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,4.76854665743776,2.88239906833923,6.43836410474538,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,3.14691421479123,3.0706351847777,3.2511385896376,0,0,0,0,0,2.34880351467878,0,0,1.95309783644267,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0,0.945928919554341,0.344745680736619,0.645484683583826,5.41705946377367,0,0,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0,0.212604299965044,0.628975936525128,0,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.238490624305342,0.571994910780128,1.11437250398869,0.39752481473341,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0.835979866147242,0,0,0,0,0,0,0.735326160691737,0.81014194788176,0.446498641420399,0,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,4.76854665743776,2.88239906833923,6.43836410474538,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:77928601..77928612,- | |short_description=p@chr4:77928601..77928612,- | ||
}} | }} |
Latest revision as of 07:02, 30 July 2015
Short description: | p@chr4:77928601..77928612, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77928601..77928612, - |
Coexpression cluster: | C1380_Mast_CD14_Basophils_embryonic_pineal_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.21e-46 | 3 |
mast cell | 1.74e-28 | 5 |
basophil mast progenitor cell | 1.74e-28 | 5 |
granulocyte | 5.58e-18 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.41e-16 | 1 |
myeloid leukocyte | 2.77e-16 | 72 |
endocrine cell | 3.80e-16 | 9 |
blood cell | 2.95e-13 | 11 |
myeloid cell | 1.22e-10 | 108 |
common myeloid progenitor | 1.22e-10 | 108 |
leukocyte | 2.87e-10 | 136 |
hematopoietic stem cell | 6.02e-10 | 168 |
hematopoietic cell | 2.18e-09 | 177 |
myeloid lineage restricted progenitor cell | 4.96e-08 | 66 |
granulocyte monocyte progenitor cell | 6.58e-08 | 67 |
hematopoietic oligopotent progenitor cell | 7.23e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.23e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-09 | 76 |
bone element | 1.29e-08 | 82 |
skeletal element | 8.21e-08 | 90 |
immune system | 1.51e-07 | 93 |
hematopoietic system | 3.88e-07 | 98 |
blood island | 3.88e-07 | 98 |
skeletal system | 5.50e-07 | 100 |