FFCP PHASE1:Hg19::chr5:121401627..121401642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121401627..121401642,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121401627..121401642,- | |description=CAGE_peak_at_chr5:121401627..121401642,- | ||
|id=chr5:121401627..121401642,- | |id=chr5:121401627..121401642,- | ||
|ontology_enrichment_celltype=CL:0000055!3.24e-21!180;CL:0000057!3.82e-21!75;CL:0002620!2.68e-13!23;CL:0002334!1.77e-10!12;CL:0000048!6.76e-10!430;CL:0000723!2.45e-09!436;CL:0000034!1.26e-08!444 | |ontology_enrichment_celltype=CL:0000055!3.24e-21!180;CL:0000057!3.82e-21!75;CL:0002620!2.68e-13!23;CL:0002334!1.77e-10!12;CL:0000048!6.76e-10!430;CL:0000723!2.45e-09!436;CL:0000034!1.26e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.00e-11;3!CL:0002620;2.57e-11;23!CL:0000136;2.46e-09;13!CL:0002617;4.65e-08;2!CL:0002570;2.62e-07;8!CL:0002334;3.25e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.05e-14,15;CL:0000057,1.28e-12,76;CL:0002620,1.84e-11,23;CL:0002579,1.84e-11,3;CL:0002617,3.10e-08,2;CL:0002570,2.11e-07,8;CL:0000134,2.84e-07,354;CL:0002334,3.64e-07,12;CL:0000048,3.90e-07,427;CL:0002320,5.87e-07,361;CL:0000723,6.76e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.21e-10!14;DOID:17!3.41e-07!5;DOID:450!3.41e-07!5;DOID:66!3.41e-07!5;DOID:423!3.41e-07!5;DOID:0080000!3.41e-07!5;DOID:11722!3.41e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;7.10e-12;5!DOID:450;7.10e-12;5!DOID:66;7.10e-12;5!DOID:423;7.10e-12;5!DOID:0080000;7.10e-12;5!DOID:11722;7.10e-12;5!DOID:3350;4.65e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.73e-12,5;DOID:450,3.73e-12,5;DOID:66,3.73e-12,5;DOID:423,3.73e-12,5;DOID:0080000,3.73e-12,5;DOID:11722,3.73e-12,5;DOID:3350,2.49e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.75e-09!45;UBERON:0002416!1.75e-09!45;UBERON:0002097!2.21e-08!40;UBERON:0003688!2.77e-08!6;UBERON:0002358!2.77e-08!6;UBERON:0003684!2.77e-08!6;UBERON:0001178!2.77e-08!6;UBERON:0003102!1.09e-07!95;UBERON:0002384!6.28e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.76e-15;6!UBERON:0002358;5.76e-15;6!UBERON:0003684;5.76e-15;6!UBERON:0001178;5.76e-15;6!UBERON:0004457;4.09e-14;9!UBERON:0000042;4.09e-14;9!UBERON:0001013;1.39e-08;14!UBERON:0002199;2.01e-08;46!UBERON:0002416;2.01e-08;46!UBERON:0002097;2.59e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.88e-15,6;UBERON:0002358,4.88e-15,6;UBERON:0003684,4.88e-15,6;UBERON:0001178,4.88e-15,6;UBERON:0002199,1.61e-10,46;UBERON:0002416,1.61e-10,46;UBERON:0004457,1.77e-10,12;UBERON:0000042,1.77e-10,12;UBERON:0002097,2.31e-10,41;UBERON:0001013,1.22e-08,14;UBERON:0002384,9.78e-08,371 | |||
|phase1_expression=2.36181893051724,1.71280419112787,1.55049844505568,4.00293193412522,0.446961094427288,2.61701557230111,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.369363174230364,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,1.00267582127178,1.30361867064741,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,2.48485975847659,0.759783069987479,1.72131935057184,4.87622255272983,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,4.48474089222155,1.70845911054854,1.69545520927649,3.60109315301283,0.412210116953756,3.09168648054755,1.48893485065272,2.53164498361899,0.974370051611986,3.78650661366172,0.644349290496095,0.646584227275248,3.55009592516614,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.775630294546667,0,0.845302752556,0.26593811658487,0,0,0,0,0.857867961948885,0,0,0,0.710783897485092,0,0,0,0.799783929456456,0,0,0,0.479249710983165,0,0,1.01346914667305,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.2276957863045,2.24528075546459,1.66580894032411,2.04682899626681,2.2519548960105,0,0.616838775210622,0.355123450626254,0.328508624055237,0.519254429183621,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,12.9073062200562,0.6970372701606,0,1.06461206063404,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0,0,1.58510321173008,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,0,1.31535265576129,0.578775534266688,0,0.202910376962704,0,0,0,0.196498082026242,0.35667105148125,0,0.633322905892992,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,2.57979048707425,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0.864221491201268,1.30634944043764,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63599316893057,2.77402930751307,0.378806010550178,0,0,1.37304041038154,0.453692771289717,0.15543720058278,0.295710299979268,0.159296767163702,0.899606224327209,0.776314784381297,0.829412415681711,3.45594228925393,1.04349012362347,1.35231848097497,1.52322084867518,0.406870733204662,0.909243296012797,0.322231671127465,0,1.19428766609585,0.400027764663154,3.77735275701072,1.34699795506368,0,0,0,0,0.453411851024545,0,0,0.358177682162975,0,0.438568099157414,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.762764190934334,0,0,0,0.80682027481408,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,3.39997695141398,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,0.924351257262837,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|short_description=p@chr5:121401627..121401642,- | |short_description=p@chr5:121401627..121401642,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121401627..121401642, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121401627..121401642, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.05e-14 | 15 |
fibroblast | 1.28e-12 | 76 |
skin fibroblast | 1.84e-11 | 23 |
omentum preadipocyte | 1.84e-11 | 3 |
adipocyte of breast | 3.10e-08 | 2 |
mesenchymal stem cell of adipose | 2.11e-07 | 8 |
mesenchymal cell | 2.84e-07 | 354 |
preadipocyte | 3.64e-07 | 12 |
multi fate stem cell | 3.90e-07 | 427 |
connective tissue cell | 5.87e-07 | 361 |
somatic stem cell | 6.76e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.88e-15 | 6 |
peritoneum | 4.88e-15 | 6 |
abdominal cavity | 4.88e-15 | 6 |
visceral peritoneum | 4.88e-15 | 6 |
integument | 1.61e-10 | 46 |
integumental system | 1.61e-10 | 46 |
cavity lining | 1.77e-10 | 12 |
serous membrane | 1.77e-10 | 12 |
skin of body | 2.31e-10 | 41 |
adipose tissue | 1.22e-08 | 14 |
connective tissue | 9.78e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.73e-12 | 5 |
myotonic disease | 3.73e-12 | 5 |
muscle tissue disease | 3.73e-12 | 5 |
myopathy | 3.73e-12 | 5 |
muscular disease | 3.73e-12 | 5 |
myotonic dystrophy | 3.73e-12 | 5 |
mesenchymal cell neoplasm | 2.49e-08 | 2 |