FFCP PHASE1:Hg19::chr5:121401877..121401903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121401877..121401903,- | |||
|coexpression_cluster_id=C421 | |coexpression_cluster_id=C421 | ||
|description=CAGE_peak_at_chr5:121401877..121401903,- | |description=CAGE_peak_at_chr5:121401877..121401903,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.05e-25!180;CL:0000057!1.26e-20!75;CL:0002620!3.49e-15!23;CL:0000048!2.98e-10!430;CL:0000723!6.26e-10!436;CL:0002334!7.33e-10!12;CL:0000144!1.63e-09!625;CL:0000034!4.09e-09!444;CL:0002371!2.74e-08!591;CL:0000680!2.95e-08!57;CL:0000056!2.95e-08!57;CL:0000355!2.95e-08!57;CL:0000222!1.85e-07!119;CL:0000548!5.04e-07!679;CL:0000004!5.04e-07!679;CL:0000255!5.04e-07!679;CL:0000187!8.33e-07!54;CL:0000012!8.86e-07!682;CL:0000192!9.27e-07!42;CL:0000514!9.27e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.05e-25!180;CL:0000057!1.26e-20!75;CL:0002620!3.49e-15!23;CL:0000048!2.98e-10!430;CL:0000723!6.26e-10!436;CL:0002334!7.33e-10!12;CL:0000144!1.63e-09!625;CL:0000034!4.09e-09!444;CL:0002371!2.74e-08!591;CL:0000680!2.95e-08!57;CL:0000056!2.95e-08!57;CL:0000355!2.95e-08!57;CL:0000222!1.85e-07!119;CL:0000548!5.04e-07!679;CL:0000004!5.04e-07!679;CL:0000255!5.04e-07!679;CL:0000187!8.33e-07!54;CL:0000012!8.86e-07!682;CL:0000192!9.27e-07!42;CL:0000514!9.27e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.97e-11;23!CL:0002334;1.54e-10;12!CL:0002579;3.68e-09;3!CL:0002580;4.80e-09;3!CL:1000306;2.86e-07;4!CL:0002547;2.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0002620;7.97e-11;23!CL:0002334;1.54e-10;12!CL:0002579;3.68e-09;3!CL:0002580;4.80e-09;3!CL:1000306;2.86e-07;4!CL:0002547;2.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.29e-19,76;CL:0000048,3.37e-11,427;CL:0002334,4.08e-11,12;CL:0000723,7.59e-11,433;CL:0002620,8.26e-11,23;CL:0000034,2.16e-10,441;CL:0000134,3.21e-10,354;CL:0002320,8.86e-10,361;CL:0002579,1.20e-09,3;CL:0002580,1.85e-09,3;CL:0000136,1.84e-08,15;CL:0000219,3.07e-08,386;CL:1000306,4.93e-07,4;CL:0002547,4.93e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.65e-09!14 | |ontology_enrichment_disease=DOID:2394!3.65e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:17;4.14e-10;5!DOID:450;4.14e-10;5!DOID:66;4.14e-10;5!DOID:423;4.14e-10;5!DOID:0080000;4.14e-10;5!DOID:11722;4.14e-10;5!DOID:2394;6.98e-09;14!DOID:3350;2.60e-07;2 | |ontology_enrichment_disease_v019=DOID:17;4.14e-10;5!DOID:450;4.14e-10;5!DOID:66;4.14e-10;5!DOID:423;4.14e-10;5!DOID:0080000;4.14e-10;5!DOID:11722;4.14e-10;5!DOID:2394;6.98e-09;14!DOID:3350;2.60e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.82e-10,5;DOID:450,4.82e-10,5;DOID:66,4.82e-10,5;DOID:423,4.82e-10,5;DOID:0080000,4.82e-10,5;DOID:11722,4.82e-10,5;DOID:2394,1.33e-08,14;DOID:3350,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.33e-09!83;UBERON:0002329!2.33e-09!83;UBERON:0003077!2.33e-09!83;UBERON:0003059!2.33e-09!83;UBERON:0007282!2.33e-09!83;UBERON:0009618!2.33e-09!83;UBERON:0007285!2.33e-09!83;UBERON:0004290!2.74e-09!70;UBERON:0002199!2.95e-09!45;UBERON:0002416!2.95e-09!45;UBERON:0002097!1.99e-08!40;UBERON:0000486!1.02e-07!82;UBERON:0003688!1.41e-07!6;UBERON:0002358!1.41e-07!6;UBERON:0003684!1.41e-07!6;UBERON:0001178!1.41e-07!6;UBERON:0001134!3.72e-07!61;UBERON:0002036!3.72e-07!61;UBERON:0003082!3.72e-07!61;UBERON:0000475!7.05e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!2.33e-09!83;UBERON:0002329!2.33e-09!83;UBERON:0003077!2.33e-09!83;UBERON:0003059!2.33e-09!83;UBERON:0007282!2.33e-09!83;UBERON:0009618!2.33e-09!83;UBERON:0007285!2.33e-09!83;UBERON:0004290!2.74e-09!70;UBERON:0002199!2.95e-09!45;UBERON:0002416!2.95e-09!45;UBERON:0002097!1.99e-08!40;UBERON:0000486!1.02e-07!82;UBERON:0003688!1.41e-07!6;UBERON:0002358!1.41e-07!6;UBERON:0003684!1.41e-07!6;UBERON:0001178!1.41e-07!6;UBERON:0001134!3.72e-07!61;UBERON:0002036!3.72e-07!61;UBERON:0003082!3.72e-07!61;UBERON:0000475!7.05e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.45e-12;6!UBERON:0002358;7.45e-12;6!UBERON:0003684;7.45e-12;6!UBERON:0001178;7.45e-12;6!UBERON:0004457;7.71e-11;9!UBERON:0000042;7.71e-11;9!UBERON:0004797;2.86e-07;4!UBERON:0000415;2.86e-07;4!UBERON:0007240;2.86e-07;4!UBERON:0005742;2.86e-07;4!UBERON:0005734;2.86e-07;4!UBERON:0004664;2.86e-07;4!UBERON:0004663;2.86e-07;4!UBERON:0002384;5.47e-07;198!UBERON:0005406;7.20e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;7.45e-12;6!UBERON:0002358;7.45e-12;6!UBERON:0003684;7.45e-12;6!UBERON:0001178;7.45e-12;6!UBERON:0004457;7.71e-11;9!UBERON:0000042;7.71e-11;9!UBERON:0004797;2.86e-07;4!UBERON:0000415;2.86e-07;4!UBERON:0007240;2.86e-07;4!UBERON:0005742;2.86e-07;4!UBERON:0005734;2.86e-07;4!UBERON:0004664;2.86e-07;4!UBERON:0004663;2.86e-07;4!UBERON:0002384;5.47e-07;198!UBERON:0005406;7.20e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.08e-12,6;UBERON:0002358,3.08e-12,6;UBERON:0003684,3.08e-12,6;UBERON:0001178,3.08e-12,6;UBERON:0002384,1.67e-10,371;UBERON:0004457,3.90e-08,12;UBERON:0000042,3.90e-08,12;UBERON:0002097,1.12e-07,41;UBERON:0005406,4.89e-07,2;UBERON:0000415,4.93e-07,4;UBERON:0007240,4.93e-07,4;UBERON:0005742,4.93e-07,4;UBERON:0005734,4.93e-07,4;UBERON:0004664,4.93e-07,4;UBERON:0004663,4.93e-07,4;UBERON:0000310,5.09e-07,10 | |||
|phase1_expression=1.45342703416445,1.49870366723688,0.986680828671798,3.00219895059391,1.34088328328186,4.36169262050184,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0,0.940364164434263,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0.361439152384566,1.00267582127178,1.15877215168659,0,1.45990461090791,0.283604451492204,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.01304409331664,2.1185468930115,4.30254931123221,0.709336764396714,0,0,0.74000264525148,0,0,0,0.454072282934794,0.576175924479999,0,0.624320153660641,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0.280901613404497,0.408308342509787,0,0,0,1.23633464639278,0,0,0,0,0,0.877955241761676,1.5324389789951,0.300476117813194,0,4.12596162084383,2.13557388818567,2.7551147150743,2.10063767259082,0.309157587715317,2.57640540045629,1.48893485065272,2.53164498361899,0.779496041289589,1.26216887122057,1.19664868234989,0.80823028409406,3.19508633264953,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,1.29271715757778,0,0.845302752556,0.797814349754612,2.08014873822732,0.257207374262142,0,0,1.42977993658148,0.542621605391443,0,0,1.06617584622764,0,0.904318131178758,0,1.09970290300263,0,0,0,1.4377491329495,0,0,1.30303176000821,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,1.60586089917446,0.788512075169673,0.35142424497814,0.300946099727719,0,0,1.99267679560631,0,0.434418072340414,0,0,0,0,0,0,0,0,1.48864684691266,2.30192959932094,1.68396056659844,1.66580894032411,1.53512174720011,3.69964018630297,1.48418066444991,0.925258162815933,0.532685175939381,0.574890092096664,0,0.232420756919918,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0,0.307007349452259,0.275673144969061,0,0,0,0.178064071293475,0,0,0,0,0.929691098594572,9.75918275174984,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.272999822815972,0.282810863907425,2.26016233240486,0.551365343546124,1.32687795048244,0,0,1.31178950409327,0.405820753925408,0,0.281695602532241,0.286822704408103,0.392996164052485,0,0,1.26664581178598,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,5.28767299025073,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1914971689782,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.528001682597033,0,0,0,0,0,0.542999601753713,0,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.16856654923612,1.10961172300523,0,0.251567901752575,0,0.457680136793847,0.453692771289717,0.310874401165561,0.295710299979268,0.477890301491107,1.34940933649081,0.621051827505038,0.414706207840855,3.19010057469594,1.04349012362347,1.05180326298053,1.14241563650639,1.22061219961398,0.545545977607678,0.966695013382396,0,2.78667122089031,0.800055529326307,1.37358282073117,1.34699795506368,0,0,0.214441591374926,0,0.906823702049089,0.694567422971502,0,0.71635536432595,0,0.438568099157414,0.883445729729405,0.771656153083659,1.01365464391844,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.41070377476274,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,3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| ||
|short_description=p@chr5:121401877..121401903,- | |short_description=p@chr5:121401877..121401903,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121401877..121401903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121401877..121401903, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.29e-19 | 76 |
multi fate stem cell | 3.37e-11 | 427 |
preadipocyte | 4.08e-11 | 12 |
somatic stem cell | 7.59e-11 | 433 |
skin fibroblast | 8.26e-11 | 23 |
stem cell | 2.16e-10 | 441 |
mesenchymal cell | 3.21e-10 | 354 |
connective tissue cell | 8.86e-10 | 361 |
omentum preadipocyte | 1.20e-09 | 3 |
preadipocyte of the breast | 1.85e-09 | 3 |
fat cell | 1.84e-08 | 15 |
motile cell | 3.07e-08 | 386 |
fibroblast of tunica adventitia of artery | 4.93e-07 | 4 |
fibroblast of the aortic adventitia | 4.93e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.08e-12 | 6 |
peritoneum | 3.08e-12 | 6 |
abdominal cavity | 3.08e-12 | 6 |
visceral peritoneum | 3.08e-12 | 6 |
connective tissue | 1.67e-10 | 371 |
cavity lining | 3.90e-08 | 12 |
serous membrane | 3.90e-08 | 12 |
skin of body | 1.12e-07 | 41 |
perirenal fat | 4.89e-07 | 2 |
artery wall | 4.93e-07 | 4 |
tunica adventitia of artery | 4.93e-07 | 4 |
adventitia | 4.93e-07 | 4 |
tunica adventitia of blood vessel | 4.93e-07 | 4 |
aorta tunica adventitia | 4.93e-07 | 4 |
aorta wall | 4.93e-07 | 4 |
breast | 5.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.82e-10 | 5 |
myotonic disease | 4.82e-10 | 5 |
muscle tissue disease | 4.82e-10 | 5 |
myopathy | 4.82e-10 | 5 |
muscular disease | 4.82e-10 | 5 |
myotonic dystrophy | 4.82e-10 | 5 |
ovarian cancer | 1.33e-08 | 14 |
mesenchymal cell neoplasm | 2.25e-07 | 2 |