FFCP PHASE1:Hg19::chr5:155802426..155802430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:155802426..155802430,+ | |||
|description=CAGE_peak_at_chr5:155802426..155802430,+ | |description=CAGE_peak_at_chr5:155802426..155802430,+ | ||
|id=chr5:155802426..155802430,+ | |id=chr5:155802426..155802430,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.63e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.72e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.09e-12;1!DOID:17;2.91e-09;5!DOID:450;2.91e-09;5!DOID:66;2.91e-09;5!DOID:423;2.91e-09;5!DOID:0080000;2.91e-09;5!DOID:11722;2.91e-09;5!DOID:3451;9.69e-07;2!DOID:4159;9.69e-07;2!DOID:0060122;9.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.93e-12,1;DOID:17,2.91e-09,5;DOID:450,2.91e-09,5;DOID:66,2.91e-09,5;DOID:423,2.91e-09,5;DOID:0080000,2.91e-09,5;DOID:11722,2.91e-09,5;DOID:3451,9.44e-07,2;DOID:4159,9.44e-07,2;DOID:0060122,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-21!115;UBERON:0001049!6.99e-13!57;UBERON:0005068!6.99e-13!57;UBERON:0006241!6.99e-13!57;UBERON:0007135!6.99e-13!57;UBERON:0002780!6.01e-12!41;UBERON:0001890!6.01e-12!41;UBERON:0006240!6.01e-12!41;UBERON:0003080!1.71e-11!42;UBERON:0001017!1.47e-10!82;UBERON:0000955!2.28e-10!69;UBERON:0006238!2.28e-10!69;UBERON:0005743!2.73e-10!86;UBERON:0002616!4.48e-10!59;UBERON:0002346!1.06e-09!90;UBERON:0003075!3.06e-09!86;UBERON:0007284!3.06e-09!86;UBERON:0000073!4.35e-09!94;UBERON:0001016!4.35e-09!94;UBERON:0000153!1.91e-08!129;UBERON:0007811!1.91e-08!129;UBERON:0000924!2.59e-08!173;UBERON:0006601!2.59e-08!173;UBERON:0000033!3.46e-08!123;UBERON:0004121!6.81e-08!169;UBERON:0002020!7.68e-08!34;UBERON:0003528!7.68e-08!34;UBERON:0001893!9.81e-08!34;UBERON:0003056!2.37e-07!61;UBERON:0002791!2.90e-07!33;UBERON:0001894!6.98e-07!7;UBERON:0006222!6.98e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.78e-21!115;UBERON:0001049!6.99e-13!57;UBERON:0005068!6.99e-13!57;UBERON:0006241!6.99e-13!57;UBERON:0007135!6.99e-13!57;UBERON:0002780!6.01e-12!41;UBERON:0001890!6.01e-12!41;UBERON:0006240!6.01e-12!41;UBERON:0003080!1.71e-11!42;UBERON:0001017!1.47e-10!82;UBERON:0000955!2.28e-10!69;UBERON:0006238!2.28e-10!69;UBERON:0005743!2.73e-10!86;UBERON:0002616!4.48e-10!59;UBERON:0002346!1.06e-09!90;UBERON:0003075!3.06e-09!86;UBERON:0007284!3.06e-09!86;UBERON:0000073!4.35e-09!94;UBERON:0001016!4.35e-09!94;UBERON:0000153!1.91e-08!129;UBERON:0007811!1.91e-08!129;UBERON:0000924!2.59e-08!173;UBERON:0006601!2.59e-08!173;UBERON:0000033!3.46e-08!123;UBERON:0004121!6.81e-08!169;UBERON:0002020!7.68e-08!34;UBERON:0003528!7.68e-08!34;UBERON:0001893!9.81e-08!34;UBERON:0003056!2.37e-07!61;UBERON:0002791!2.90e-07!33;UBERON:0001894!6.98e-07!7;UBERON:0006222!6.98e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.09e-12;1!UBERON:0003831;3.09e-12;1!UBERON:0003898;3.09e-12;1!UBERON:0004830;3.09e-12;1!UBERON:0003830;3.09e-12;1!UBERON:0005175;3.09e-12;1!UBERON:0001774;3.09e-12;1!UBERON:0001103;3.09e-12;1!UBERON:0002146;4.06e-12;1!UBERON:0005623;4.06e-12;1!UBERON:0002038;9.60e-12;1!UBERON:0009661;9.60e-12;1!UBERON:0002950;9.60e-12;1!UBERON:0001891;9.60e-12;1!UBERON:0002199;1.79e-07;46!UBERON:0002416;1.79e-07;46!UBERON:0002097;5.08e-07;41!UBERON:0005090;9.69e-07;2!UBERON:0001630;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.27e-12,1;UBERON:0003831,3.27e-12,1;UBERON:0003898,3.27e-12,1;UBERON:0004830,3.27e-12,1;UBERON:0003830,3.27e-12,1;UBERON:0005175,3.27e-12,1;UBERON:0001774,3.27e-12,1;UBERON:0001103,3.27e-12,1;UBERON:0010084,3.27e-12,1;UBERON:0002146,4.53e-12,1;UBERON:0005623,4.53e-12,1;UBERON:0002038,1.81e-11,1;UBERON:0009661,1.81e-11,1;UBERON:0002950,1.81e-11,1;UBERON:0001891,1.81e-11,1;UBERON:0009616,1.81e-11,1;UBERON:0010286,1.81e-11,1;UBERON:0002097,7.23e-09,41;UBERON:0002199,7.40e-08,46;UBERON:0002416,7.40e-08,46;UBERON:0005090,9.96e-07,2;UBERON:0001630,9.96e-07,2 | |||
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| ||
|short_description=p@chr5:155802426..155802430,+ | |short_description=p@chr5:155802426..155802430,+ | ||
}} | }} |
Latest revision as of 12:13, 30 July 2015
Short description: | p@chr5:155802426..155802430, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:155802426..155802430, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.72e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.27e-12 | 1 |
respiratory system muscle | 3.27e-12 | 1 |
skeletal muscle of trunk | 3.27e-12 | 1 |
respiratory system skeletal muscle | 3.27e-12 | 1 |
thoracic segment muscle | 3.27e-12 | 1 |
chest organ | 3.27e-12 | 1 |
muscle of trunk | 3.27e-12 | 1 |
diaphragm | 3.27e-12 | 1 |
future diaphragm | 3.27e-12 | 1 |
pulmonary valve | 4.53e-12 | 1 |
semi-lunar valve | 4.53e-12 | 1 |
substantia nigra | 1.81e-11 | 1 |
midbrain nucleus | 1.81e-11 | 1 |
regional part of midbrain | 1.81e-11 | 1 |
midbrain | 1.81e-11 | 1 |
presumptive midbrain | 1.81e-11 | 1 |
midbrain neural tube | 1.81e-11 | 1 |
skin of body | 7.23e-09 | 41 |
integument | 7.40e-08 | 46 |
integumental system | 7.40e-08 | 46 |
muscle structure | 9.96e-07 | 2 |
muscle organ | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.93e-12 | 1 |
musculoskeletal system disease | 2.91e-09 | 5 |
myotonic disease | 2.91e-09 | 5 |
muscle tissue disease | 2.91e-09 | 5 |
myopathy | 2.91e-09 | 5 |
muscular disease | 2.91e-09 | 5 |
myotonic dystrophy | 2.91e-09 | 5 |
skin carcinoma | 9.44e-07 | 2 |
skin cancer | 9.44e-07 | 2 |
integumentary system cancer | 9.44e-07 | 2 |