FFCP PHASE1:Hg19::chr5:32207239..32207246,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:32207239..32207246,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr5:32207239..32207246,+ | |||
|id=chr5:32207239..32207246,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.76e-27!24;CL:0000826!5.76e-27!24;CL:0000236!5.11e-21!14;CL:0000946!3.91e-19!1;CL:0000786!3.91e-19!1;CL:0000980!3.91e-19!1;CL:0000838!2.04e-12!52;CL:0000542!3.52e-12!53;CL:0000051!3.52e-12!53;CL:0000785!2.99e-10!2;CL:0000955!2.99e-10!2;CL:0000818!2.99e-10!2;CL:0000954!2.99e-10!2;CL:0000816!2.99e-10!2;CL:0000817!2.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002092;3.02e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.02e-11,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!1.08e-19!1;DOID:0070004!1.08e-19!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.55e-98;1!DOID:0070004;2.55e-98;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.55e-98,1;DOID:0070004,2.55e-98,1 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.25e-19!1;UBERON:0001961!2.25e-19!1;UBERON:0001744!2.25e-19!1;UBERON:0001735!2.25e-19!1;UBERON:0001255!3.27e-10!2;UBERON:0001556!3.27e-10!2;UBERON:0003127!3.58e-10!2;UBERON:0002106!2.63e-07!3;UBERON:0004854!2.63e-07!3;UBERON:0009034!2.63e-07!3;UBERON:0002095!2.63e-07!3;UBERON:0004782!2.63e-07!3;UBERON:0003281!2.63e-07!3;UBERON:0009664!2.63e-07!3;UBERON:0002296!2.63e-07!3;UBERON:0005602!2.63e-07!3;UBERON:0001179!2.63e-07!3;UBERON:0006293!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11401874832599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92765465423387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:32207239..32207246,+ | |||
}} |
Latest revision as of 14:20, 30 July 2015
Short description: | p@chr5:32207239..32207246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:32207239..32207246, + |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.55e-98 | 1 |
myeloma | 2.55e-98 | 1 |