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FFCP PHASE1:Hg19::chr5:52619638..52619641,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr5:52619638..52619641,+
|description=CAGE_peak_at_chr5:52619638..52619641,+
|description=CAGE_peak_at_chr5:52619638..52619641,+
|id=chr5:52619638..52619641,+
|id=chr5:52619638..52619641,+
|ontology_enrichment_celltype=CL:0002621!2.09e-27!3;CL:0002159!3.90e-24!13;CL:0002368!8.36e-24!13;CL:0002076!9.77e-23!43;CL:0000317!5.88e-19!2;CL:1000448!5.88e-19!2;CL:0002308!5.88e-19!2;CL:0002140!5.88e-19!2;CL:0000223!4.23e-16!59;CL:0002202!4.59e-16!9;CL:0002632!4.59e-16!9;CL:0000066!2.76e-13!254;CL:0002328!4.61e-13!3;CL:0002166!6.98e-13!3;CL:0000068!1.19e-12!3;CL:0000069!1.19e-12!3;CL:0000307!1.19e-12!3;CL:0000377!1.19e-12!3;CL:0000362!1.38e-10!8;CL:0002336!8.99e-10!1;CL:0002261!8.99e-10!1;CL:0002170!8.99e-10!1;CL:0000244!1.66e-09!4;CL:0000731!1.66e-09!4;CL:0002327!1.97e-09!4;CL:0002077!3.06e-09!33;CL:0000622!4.01e-08!5;CL:0000220!2.61e-07!246;CL:0002321!3.16e-07!248;CL:0000154!6.65e-07!6;CL:0002251!6.65e-07!21
|ontology_enrichment_celltype=CL:0002621!2.09e-27!3;CL:0002159!3.90e-24!13;CL:0002368!8.36e-24!13;CL:0002076!9.77e-23!43;CL:0000317!5.88e-19!2;CL:1000448!5.88e-19!2;CL:0002308!5.88e-19!2;CL:0002140!5.88e-19!2;CL:0000223!4.23e-16!59;CL:0002202!4.59e-16!9;CL:0002632!4.59e-16!9;CL:0000066!2.76e-13!254;CL:0002328!4.61e-13!3;CL:0002166!6.98e-13!3;CL:0000068!1.19e-12!3;CL:0000069!1.19e-12!3;CL:0000307!1.19e-12!3;CL:0000377!1.19e-12!3;CL:0000362!1.38e-10!8;CL:0002336!8.99e-10!1;CL:0002261!8.99e-10!1;CL:0002170!8.99e-10!1;CL:0000244!1.66e-09!4;CL:0000731!1.66e-09!4;CL:0002327!1.97e-09!4;CL:0002077!3.06e-09!33;CL:0000622!4.01e-08!5;CL:0000220!2.61e-07!246;CL:0002321!3.16e-07!248;CL:0000154!6.65e-07!6;CL:0002251!6.65e-07!21
|ontology_enrichment_celltype_v019=CL:0002621;1.98e-54;3!CL:0000317;1.18e-36;2!CL:1000448;1.18e-36;2!CL:0002308;1.18e-36;2!CL:0002140;1.18e-36;2!CL:0002159;4.01e-32;14!CL:0002328;3.59e-25;3!CL:0002166;4.31e-25;3!CL:0002202;9.78e-19;9!CL:0002632;9.78e-19;9!CL:0000622;2.51e-15;5!CL:0002368;3.48e-13;13!CL:0000154;6.12e-13;6!CL:0002076;3.51e-12;42!CL:0002077;1.27e-11;34!CL:0000575;2.60e-10;2!CL:0000150;6.10e-09;9!CL:0000362;6.10e-09;9!CL:0002251;9.11e-09;20!CL:0000307;2.71e-07;3
|ontology_enrichment_celltype_v019_2=CL:0002621,2.17e-54,3;CL:0000317,4.73e-37,2;CL:1000448,4.73e-37,2;CL:0002308,4.73e-37,2;CL:0002140,4.73e-37,2;CL:0002159,4.15e-32,14;CL:0002328,2.64e-25,3;CL:0002166,6.22e-25,3;CL:0002202,9.21e-19,9;CL:0002632,9.21e-19,9;CL:0000622,1.75e-15,5;CL:0002076,2.25e-15,42;CL:0002077,2.46e-13,34;CL:0002368,3.34e-13,13;CL:0000154,4.52e-13,6;CL:0000223,4.21e-11,58;CL:0000575,3.27e-10,2;CL:0000150,5.00e-09,9;CL:0000362,5.00e-09,9;CL:0002251,9.23e-09,20;CL:0002321,5.72e-08,250;CL:0000066,6.20e-08,253;CL:0000068,2.97e-07,3;CL:0000069,2.97e-07,3;CL:0000307,2.97e-07,3;CL:0000377,2.97e-07,3
|ontology_enrichment_development_v019=CL:0000377;2.71e-07;3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019=UBERON:0001949;1.98e-54;3!UBERON:0002419;1.18e-36;2!UBERON:0007771;1.18e-36;2!UBERON:0003297;1.18e-36;2!UBERON:0001821;1.18e-36;2!UBERON:0003487;1.18e-36;2!UBERON:0001820;1.18e-36;2!UBERON:0004815;3.59e-25;3!UBERON:0002031;3.59e-25;3!UBERON:0003929;8.03e-24;7!UBERON:0003350;6.11e-21;8!UBERON:0001828;6.11e-21;8!UBERON:0004807;1.20e-20;22!UBERON:0001708;4.29e-19;4!UBERON:0008895;4.29e-19;4!UBERON:0002185;1.56e-15;5!UBERON:0011159;1.74e-15;5!UBERON:0010371;1.37e-14;31!UBERON:0000486;3.37e-14;12!UBERON:0003729;3.70e-13;13!UBERON:0005911;4.49e-12;36!UBERON:0007196;1.64e-11;15!UBERON:0001558;1.64e-11;15!UBERON:0000485;2.24e-11;7!UBERON:0000161;3.38e-09;19!UBERON:0000166;3.38e-09;19!UBERON:0000344;9.11e-09;20!UBERON:0011137;1.51e-07;11!UBERON:0010323;1.51e-07;11
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.17e-54,3;UBERON:0002419,4.73e-37,2;UBERON:0007771,4.73e-37,2;UBERON:0003297,4.73e-37,2;UBERON:0001821,4.73e-37,2;UBERON:0003487,4.73e-37,2;UBERON:0001820,4.73e-37,2;UBERON:0005089,4.73e-37,2;UBERON:0005088,4.73e-37,2;UBERON:0004815,2.64e-25,3;UBERON:0002031,2.64e-25,3;UBERON:0003350,6.32e-21,8;UBERON:0001828,6.32e-21,8;UBERON:0001708,5.64e-19,4;UBERON:0008895,5.64e-19,4;UBERON:0004807,2.74e-16,28;UBERON:0002185,1.30e-15,5;UBERON:0011159,2.17e-15,5;UBERON:0003729,3.78e-13,13;UBERON:0010188,5.42e-13,6;UBERON:0002539,5.42e-13,6;UBERON:0008816,5.42e-13,6;UBERON:0007196,1.58e-11,15;UBERON:0001558,1.58e-11,15;UBERON:0000033,1.95e-11,56;UBERON:0003102,3.45e-11,99;UBERON:0000153,2.57e-10,62;UBERON:0007811,2.57e-10,62;UBERON:0000485,4.25e-09,9;UBERON:0000344,9.23e-09,20;UBERON:0001004,1.16e-08,74;UBERON:0000166,5.14e-08,22;UBERON:0010323,1.67e-07,11
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|short_description=p@chr5:52619638..52619641,+
|short_description=p@chr5:52619638..52619641,+
}}
}}

Latest revision as of 15:10, 30 July 2015

Short description:p@chr5:52619638..52619641, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr5:52619638..52619641, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data