FFCP PHASE1:Hg19::chr5:92923453..92923465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:92923453..92923465,+ | |||
|description=CAGE_peak_at_chr5:92923453..92923465,+ | |description=CAGE_peak_at_chr5:92923453..92923465,+ | ||
|id=chr5:92923453..92923465,+ | |id=chr5:92923453..92923465,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000708;5.73e-18;3!CL:0002600;4.39e-13;2!CL:0002598;6.11e-13;2!CL:0002195;1.45e-12;2!CL:0002571;1.45e-12;2!CL:0000342;1.68e-07;1!CL:0002565;1.68e-07;1!CL:0002601;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.23e-17,3;CL:0002598,3.90e-13,2;CL:0002600,4.68e-13,2;CL:0002195,1.22e-12,2;CL:0002571,1.22e-12,2;CL:0000342,1.54e-07,1;CL:0002565,1.54e-07,1;CL:0002601,6.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.02e-14!86;UBERON:0007284!2.02e-14!86;UBERON:0002346!3.11e-13!90;UBERON:0000033!1.47e-12!123;UBERON:0000119!2.10e-12!312;UBERON:0000073!5.69e-12!94;UBERON:0001016!5.69e-12!94;UBERON:0005743!8.35e-12!86;UBERON:0000475!2.20e-11!365;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0002616!3.08e-11!59;UBERON:0000483!5.67e-11!309;UBERON:0000481!1.20e-10!347;UBERON:0002200!1.85e-10!11;UBERON:0006876!1.85e-10!11;UBERON:0003056!4.56e-10!61;UBERON:0000955!9.61e-10!69;UBERON:0006238!9.61e-10!69;UBERON:0001017!1.67e-09!82;UBERON:0004121!6.61e-09!169;UBERON:0007625!9.49e-09!11;UBERON:0000064!1.53e-08!219;UBERON:0000924!2.24e-08!173;UBERON:0006601!2.24e-08!173;UBERON:0000970!2.56e-08!20;UBERON:0001049!4.01e-08!57;UBERON:0005068!4.01e-08!57;UBERON:0006241!4.01e-08!57;UBERON:0007135!4.01e-08!57;UBERON:0001456!6.35e-08!21;UBERON:0002104!9.35e-08!21;UBERON:0000477!1.05e-07!286;UBERON:0000019!1.27e-07!19;UBERON:0000047!1.27e-07!19;UBERON:0004088!1.27e-07!19;UBERON:0003072!1.27e-07!19;UBERON:0003071!1.27e-07!19;UBERON:0004128!1.27e-07!19;UBERON:0000062!2.88e-07!511;UBERON:0000020!8.71e-07!23 | |ontology_enrichment_uberon=UBERON:0003075!2.02e-14!86;UBERON:0007284!2.02e-14!86;UBERON:0002346!3.11e-13!90;UBERON:0000033!1.47e-12!123;UBERON:0000119!2.10e-12!312;UBERON:0000073!5.69e-12!94;UBERON:0001016!5.69e-12!94;UBERON:0005743!8.35e-12!86;UBERON:0000475!2.20e-11!365;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0002616!3.08e-11!59;UBERON:0000483!5.67e-11!309;UBERON:0000481!1.20e-10!347;UBERON:0002200!1.85e-10!11;UBERON:0006876!1.85e-10!11;UBERON:0003056!4.56e-10!61;UBERON:0000955!9.61e-10!69;UBERON:0006238!9.61e-10!69;UBERON:0001017!1.67e-09!82;UBERON:0004121!6.61e-09!169;UBERON:0007625!9.49e-09!11;UBERON:0000064!1.53e-08!219;UBERON:0000924!2.24e-08!173;UBERON:0006601!2.24e-08!173;UBERON:0000970!2.56e-08!20;UBERON:0001049!4.01e-08!57;UBERON:0005068!4.01e-08!57;UBERON:0006241!4.01e-08!57;UBERON:0007135!4.01e-08!57;UBERON:0001456!6.35e-08!21;UBERON:0002104!9.35e-08!21;UBERON:0000477!1.05e-07!286;UBERON:0000019!1.27e-07!19;UBERON:0000047!1.27e-07!19;UBERON:0004088!1.27e-07!19;UBERON:0003072!1.27e-07!19;UBERON:0003071!1.27e-07!19;UBERON:0004128!1.27e-07!19;UBERON:0000062!2.88e-07!511;UBERON:0000020!8.71e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;5.73e-18;3!UBERON:0002506;1.68e-07;1!UBERON:0001769;1.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.23e-17,3;UBERON:0002506,1.54e-07,1;UBERON:0001769,1.54e-07,1;UBERON:0005177,1.90e-07,101 | |||
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|short_description=p@chr5:92923453..92923465,+ | |short_description=p@chr5:92923453..92923465,+ | ||
}} | }} |
Latest revision as of 17:20, 30 July 2015
Short description: | p@chr5:92923453..92923465, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:92923453..92923465, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.23e-17 | 3 |
bronchial smooth muscle cell | 3.90e-13 | 2 |
smooth muscle cell of trachea | 4.68e-13 | 2 |
hepatic stem cell | 1.22e-12 | 2 |
hepatic mesenchymal stem cell | 1.22e-12 | 2 |
pigment cell (sensu Vertebrata) | 1.54e-07 | 1 |
iris pigment epithelial cell | 1.54e-07 | 1 |
uterine smooth muscle cell | 6.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.23e-17 | 3 |
iris epithelium | 1.54e-07 | 1 |
iris | 1.54e-07 | 1 |
trunk region element | 1.90e-07 | 101 |