FFCP PHASE1:Hg19::chr6:11587117..11587121,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:11587117..11587121,+ | |||
|description=CAGE_peak_at_chr6:11587117..11587121,+ | |||
|id=chr6:11587117..11587121,+ | |||
|ontology_enrichment_celltype=CL:0005020!5.57e-12!6;CL:0002138!5.57e-12!6;CL:0005022!5.57e-12!6;CL:0000055!1.25e-08!180;CL:0000128!2.77e-07!7;CL:0000126!2.77e-07!7;CL:0000127!2.77e-07!7;CL:0002453!2.77e-07!7;CL:0000064!3.91e-07!3;CL:0005012!3.91e-07!3;CL:0000067!3.91e-07!3;CL:0002304!3.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.45e-17;3!CL:0000515;2.71e-17;3!CL:0000222;5.15e-14;1!CL:0000342;1.33e-13;1!CL:0002565;1.33e-13;1!CL:0000056;3.21e-13;4!CL:0002321;5.12e-08;15!CL:0000680;6.07e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.51e-17,3;CL:0000342,2.07e-13,1;CL:0002565,2.07e-13,1;CL:0000515,2.84e-13,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.21e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;5.15e-14;1!DOID:3451;1.20e-07;2!DOID:4159;1.20e-07;2!DOID:0060122;1.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.98e-14,1;DOID:3451,1.05e-07,2;DOID:4159,1.05e-07,2;DOID:0060122,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002465!3.02e-09!10;UBERON:0000488!4.31e-09!4;UBERON:0001473!9.29e-09!8;UBERON:0004536!9.29e-09!8;UBERON:0006558!9.29e-09!8;UBERON:0002049!2.00e-07!79;UBERON:0007798!2.00e-07!79;UBERON:0001778!3.91e-07!3;UBERON:0001775!3.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.45e-17;3!UBERON:0001915;1.45e-17;3!UBERON:0001982;1.45e-17;3!UBERON:0002506;1.33e-13;1!UBERON:0001769;1.33e-13;1!UBERON:0000488;3.21e-13;4!UBERON:0002203;4.03e-09;6!UBERON:0001768;4.03e-09;6!UBERON:0002200;4.03e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.51e-17,3;UBERON:0001915,1.51e-17,3;UBERON:0001982,1.51e-17,3;UBERON:0002506,2.07e-13,1;UBERON:0001769,2.07e-13,1;UBERON:0000488,4.66e-13,4;UBERON:0002203,5.15e-09,6;UBERON:0001768,5.15e-09,6;UBERON:0002200,5.15e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,1.13441780596881,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,2.00832367658802,2.01414658554573,0,1.46437234528902,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,2.33206526395521,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0.506328996723799,0,0.757301322732344,0.0920498986422993,0,2.13005755509969,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,1.59259437334337,0.205476322550383,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0.41254749960294,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0,0,0.613612095012929,0,2.48831670129446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.941425616810999,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.796191777397232,5.200360940621,0,0,2.52369796457302,0,0.643324774124777,0,0,0,0,1.4327107286519,0.308801447160972,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:11587117..11587121,+ | |||
}} |
Latest revision as of 18:35, 30 July 2015
Short description: | p@chr6:11587117..11587121, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:11587117..11587121, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.51e-17 | 3 |
pigment cell (sensu Vertebrata) | 2.07e-13 | 1 |
iris pigment epithelial cell | 2.07e-13 | 1 |
skeletal muscle myoblast | 2.84e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.51e-17 | 3 |
endothelium of capillary | 1.51e-17 | 3 |
capillary | 1.51e-17 | 3 |
iris epithelium | 2.07e-13 | 1 |
iris | 2.07e-13 | 1 |
atypical epithelium | 4.66e-13 | 4 |
vasculature of eye | 5.15e-09 | 6 |
uvea | 5.15e-09 | 6 |
vasculature of head | 5.15e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.98e-14 | 1 |
skin carcinoma | 1.05e-07 | 2 |
skin cancer | 1.05e-07 | 2 |
integumentary system cancer | 1.05e-07 | 2 |