FFCP PHASE1:Hg19::chr6:20541194..20541205,+: Difference between revisions
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|id=chr6:20541194..20541205,+
|short_description=p@chr6:20541194..20541205,+
|description=CAGE_peak_at_chr6:20541194..20541205,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:20541194..20541205,+ | |||
|coexpression_cluster_id=C516 | |||
|description=CAGE_peak_at_chr6:20541194..20541205,+ | |||
|id=chr6:20541194..20541205,+ | |||
|ontology_enrichment_celltype=CL:0000159!4.19e-09!2;CL:0002076!2.60e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.12e-50;1!CL:0000159;8.10e-26;2!CL:0002149;1.22e-09;6!CL:0002255;1.22e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.99e-50,1;CL:0000159,7.14e-26,2;CL:0002149,1.22e-09,6;CL:0002255,1.22e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!2.03e-09!2;DOID:120!2.50e-08!27;DOID:193!1.16e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.12e-50;1!DOID:4468;5.56e-26;2!DOID:299;1.05e-18;25!DOID:120;2.15e-17;27!DOID:193;2.90e-16;29!DOID:3001;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.99e-50,1;DOID:4468,5.56e-26,2;DOID:299,1.02e-18,25;DOID:120,2.09e-17,27;DOID:193,2.82e-16,29;DOID:3001,1.22e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.12e-50;1!UBERON:0004909;8.10e-26;2!UBERON:0000474;3.52e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.99e-50,1;UBERON:0004909,7.14e-26,2 | |||
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| ||
|short_description=p@chr6:20541194..20541205,+ | |||
}} | }} |
Latest revision as of 22:35, 30 July 2015
Short description: | p@chr6:20541194..20541205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:20541194..20541205, + |
Coexpression cluster: | C516_endometrioid_clear_serous_anaplastic_malignant_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.99e-50 | 1 |
seromucus secreting cell | 7.14e-26 | 2 |
epithelial cell of uterus | 1.22e-09 | 6 |
stromal cell of endometrium | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.99e-50 | 1 |
epithelium of gonad | 7.14e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.99e-50 | 1 |
clear cell adenocarcinoma | 5.56e-26 | 2 |
adenocarcinoma | 1.02e-18 | 25 |
female reproductive organ cancer | 2.09e-17 | 27 |
reproductive organ cancer | 2.82e-16 | 29 |
female reproductive endometrioid cancer | 1.22e-09 | 6 |