FFCP PHASE1:Hg19::chr6:7582860..7582909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7582860..7582909,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7582860..7582909,+ | |description=CAGE_peak_at_chr6:7582860..7582909,+ | ||
|id=chr6:7582860..7582909,+ | |id=chr6:7582860..7582909,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.27e-23!254;CL:0000223!1.17e-14!59;CL:0002076!1.10e-11!43;CL:0002251!8.83e-09!21 | |ontology_enrichment_celltype=CL:0000066!1.27e-23!254;CL:0000223!1.17e-14!59;CL:0002076!1.10e-11!43;CL:0002251!8.83e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.68e-10;5!CL:0000154;1.16e-08;6!CL:0002251;3.33e-08;20!CL:0002623;1.01e-07;3!CL:0002159;1.35e-07;14!CL:0000039;6.09e-07;7!CL:0000586;6.09e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.40e-13,58;CL:0000066,3.13e-11,253;CL:0000622,1.61e-10,5;CL:0000154,1.12e-08,6;CL:0002076,1.57e-08,42;CL:0002251,3.77e-08,20;CL:0002623,1.12e-07,3;CL:0002159,1.31e-07,14;CL:0000039,5.50e-07,7;CL:0000586,5.50e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;4.89e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.20e-20!106;DOID:0050687!1.07e-17!143;DOID:162!3.99e-10!235;DOID:14566!2.82e-09!239 | |ontology_enrichment_disease=DOID:305!1.20e-20!106;DOID:0050687!1.07e-17!143;DOID:162!3.99e-10!235;DOID:14566!2.82e-09!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.79e-07,106;DOID:0050687,5.12e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.75e-16!169;UBERON:0000925!1.75e-16!169;UBERON:0006595!1.75e-16!169;UBERON:0001007!2.89e-13!155;UBERON:0001555!2.89e-13!155;UBERON:0007026!2.89e-13!155;UBERON:0004921!6.08e-12!129;UBERON:0004185!6.08e-12!129;UBERON:0000077!1.52e-10!130;UBERON:0001041!3.30e-10!98;UBERON:0001004!5.20e-09!72;UBERON:0005911!3.05e-07!82;UBERON:0002365!4.05e-07!31;UBERON:0002330!4.05e-07!31;UBERON:0000065!7.54e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!1.75e-16!169;UBERON:0000925!1.75e-16!169;UBERON:0006595!1.75e-16!169;UBERON:0001007!2.89e-13!155;UBERON:0001555!2.89e-13!155;UBERON:0007026!2.89e-13!155;UBERON:0004921!6.08e-12!129;UBERON:0004185!6.08e-12!129;UBERON:0000077!1.52e-10!130;UBERON:0001041!3.30e-10!98;UBERON:0001004!5.20e-09!72;UBERON:0005911!3.05e-07!82;UBERON:0002365!4.05e-07!31;UBERON:0002330!4.05e-07!31;UBERON:0000065!7.54e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.47e-12;31!UBERON:0002330;3.47e-12;31!UBERON:0001041;2.71e-08;14!UBERON:0001723;4.07e-07;3!UBERON:0001033;4.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.08e-12,31;UBERON:0002330,1.08e-12,31;UBERON:0004119,9.65e-09,160;UBERON:0000925,9.65e-09,160;UBERON:0006595,9.65e-09,160;UBERON:0001723,2.75e-07,3;UBERON:0001033,2.75e-07,3;UBERON:0010056,2.75e-07,3 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,1.09288586487763,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,2.48485975847659,0.379891534993739,0.132409180813219,0,0,0,2.1349799145941,0.74000264525148,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0,0.515281080091258,0.18611685633159,0.337552664482532,0.389748020644795,1.7670364197088,0.0920498986422993,0.484938170456436,0.710019185033229,0.10075209822764,0.339121184620975,0.966304265816484,0.272746120590835,0.573609190778008,0.609868530647977,0.397589304964456,0.929551542956147,1.45125477021519,0.504641701751257,0,0,0.643240938192885,0,0,0,0.591534000199219,1.18009283054671,0.723033089650446,0.661763836394364,0.217879444092406,1.89816495288877,0.674156540800822,0.588664395376038,0.769494313892781,0,0,0,0,3.80265104465493,0.982827216677626,3.54473944008842,0,0.860919069801795,0.171567810298526,2.74375713521564,0,3.61904300681871,2.96283024507295,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,2.51973192298289,1.41775097242386,2.7763142037883,0.581267877027924,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.499864955910285,0,0,0,1.67737398844108,1.14861935834114,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,1.96271887676878,0.946214490203608,0.117141414992713,0.300946099727719,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0,0,0.907170879989041,0.744323423456331,1.07423381301644,0.841980283299221,0.512556597022804,0,2.73451665944133,0,0,0,0.0821271560138091,0,0.116210378459959,0.846016147141356,0.802025881213139,11.9705285616665,0,0,0,0.902399225814824,0.539107359730903,0,0,0.633309773357254,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,2.31398881505369,1.92190067365106,3.31793052485919,4.95673126192195,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0.376575203107117,0.86101074534246,1.68471475667626,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0.640944426764839,0,3.18552280775341,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,5.49112314896687,0.593929361665277,9.52198176507619,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,3.77899121781414,0.20453736500431,0,0.622079175323615,0.179736702294654,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,4.6876996995342,0.0874599999961957,0,0.341380344856499,0.254253650292766,4.01859059005492,0,0,0.173624994933292,0,0.482385754501632,0,0,0,0.438770794307945,0.32681539055697,2.64905114129346,0.769502585037971,0,0.922255617552241,2.33369875465408,6.30154757147647,3.19001159731919,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,1.05499032264014,0.163232808159148,0.706765357169704,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,1.17398771359254,0,0.789168805698781,0,0.30607276163049,0.189559738885464,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0.853828638089378,0,3.29763502836749,1.7638631534588,0.522355239482415,1.22308667769421,0,0.387025325156341,0.292357268344742,0.164230914106418,3.20063754411784,0,0.451961481561065,0,0,0,1.95551382734803,0.0801588202515337,0.213452994739353,2.19790570540343,1.29681375438695,0.458146384663663,0.686379991447858,0,0.248505071130865,4.9495747269527,0.407712618220842,0.104602846312333,0,0,0,0,0,0.859530882839914,0,1.11712960508902,3.43740636017525,0,4.19325901047881,3.43380838509257,0.89268582976749,0.604651252380536,1.08089965062721,8.15471646692177,2.59984501613838,1.56590130924216,1.55028150864625,0.295282444544246,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0.449947783103001,3.86900977278975,0,2.34804281319486,0.394028536495991,0,0.211200673038813,0,0.959575986597226,2.1440859791201,3.97255182219259,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.13223260174269,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0.942324577501406,0,0,0,0,0.110929051536852,0,1.24513771442608,0.624902039810533,0,0,0.235265819698172,0,0.579684114443301,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,1.04349012362347,0,0.761610424337591,0.406870733204662,0,0,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| ||
|short_description=p@chr6:7582860..7582909,+ | |short_description=p@chr6:7582860..7582909,+ | ||
}} | }} |
Latest revision as of 03:12, 31 July 2015
Short description: | p@chr6:7582860..7582909, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7582860..7582909, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.40e-13 | 58 |
epithelial cell | 3.13e-11 | 253 |
acinar cell | 1.61e-10 | 5 |
protein secreting cell | 1.12e-08 | 6 |
endo-epithelial cell | 1.57e-08 | 42 |
epithelial cell of alimentary canal | 3.77e-08 | 20 |
acinar cell of salivary gland | 1.12e-07 | 3 |
general ecto-epithelial cell | 1.31e-07 | 14 |
germ line cell | 5.50e-07 | 7 |
germ cell | 5.50e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.08e-12 | 31 |
exocrine system | 1.08e-12 | 31 |
endoderm-derived structure | 9.65e-09 | 160 |
endoderm | 9.65e-09 | 160 |
presumptive endoderm | 9.65e-09 | 160 |
tongue | 2.75e-07 | 3 |
gustatory system | 2.75e-07 | 3 |
future tongue | 2.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.79e-07 | 106 |
cell type cancer | 5.12e-07 | 143 |