FFCP PHASE1:Hg19::chr8:129056472..129056485,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:129056472..129056485,+ | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_at_chr8:129056472..129056485,+ | |description=CAGE_peak_at_chr8:129056472..129056485,+ | ||
|id=chr8:129056472..129056485,+ | |id=chr8:129056472..129056485,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.82e-28!235;DOID:14566!3.31e-28!239;DOID:0050687!2.25e-22!143;DOID:305!2.35e-13!106;DOID:0050686!1.87e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:171;6.85e-12;10!DOID:3095;1.02e-09;22!DOID:2994;1.02e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.46e-12,10;DOID:3095,1.00e-09,22;DOID:2994,1.00e-09,22;DOID:162,2.70e-09,235;DOID:14566,5.63e-09,239;DOID:0050687,1.35e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;9.12e-20;4!UBERON:0000923;9.12e-20;4!UBERON:0010316;9.12e-20;4!UBERON:0005291;9.12e-20;4!UBERON:0002050;7.66e-16;5!UBERON:0005423;7.66e-16;5!UBERON:0003135;6.65e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.84e-07,11 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.534893840235659,0.164201178899891,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,1.17447437874188,0,0,0,0,0.196709770113833,0.786021525498329,0.822405995998037,0,0,0.946895611469467,0,0,0,0.221533894583621,0.270803863765016,2.30564375506215,2.47112760363769,0.822189523018381,0.829050053357545,0.289803085735052,0,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0.234321431833797,0,0,0,0,0.647491777472526,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0,1.56919201590938,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.630809660135739,0.585707074963566,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0,0.170453254832202,0,0,0,0.893288987462089,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0.371606350251437,0.144269212976445,0.426851060090485,0,0.399158742865633,0,0.211673582723883,0,0,1.82587743226554,0,0,0,0.1605880751037,0,1.27753871307098,1.03051603426729,0.614481528616916,0,0.166849141711909,0,0.278406173895242,0,0.811367035427949,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0,0,0,0,0,1.15362711958732,2.53350489753592,0,0,0.503865495708552,0.102268682502155,0.369254416383208,0,0.449341755736634,1.25314822272926,1.02314474045374,0,0,1.11136990144637,0,0,0,1.04171104434093,0.262379999988587,0,0.227586896570999,0.762760950878299,1.18193840883968,0.689486746482929,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.46112780877612,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0.498635045700469,0,0,0.167821586975843,0.37950746544837,0.317873157960757,1.05499032264014,0,0,0,0,0,0,2.96521128680622,0.617819694732514,0.730953646538188,0,0,0,1.27718352450966,0.19566461893209,0.485560759068186,1.18375320854817,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,1.323967823502,0,0,0.569219092059585,0.277349346026277,0,0.0979923974143777,0.261177619741208,0.17472666824203,0.51595809741485,0.0967563312890851,0.292357268344742,0,0.0969890164884194,0.264768380074501,0,0.548167698587004,0.397429223405979,0,0.195551382734803,0,0.213452994739353,0.799238438328521,0.288180834308212,0.229073192331831,0.343189995723929,2.3048767678104,0.49701014226173,0.235694034616795,0.271808412147228,0.104602846312333,0.101998217636322,0.866851769704557,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,2.32991899054908,0.0787831823072236,0,0.13480708770837,0,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0.335434687599266,0,0,0.528001682597033,0.35857467866569,0.383830394638891,0,0,2.28841683889275,0,0,0,0,1.31348033198942,0.851940108927109,0.226624183040251,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0.243585196761792,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.691743174681154,0.124980407962107,0.606596470166591,0.856396000634902,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0.226705925512272,0,0.734210113519403,0,0.308801447160972,0.219284049578707,0.883445729729405,0.192914038270915,0,0.256241518587947,0.690860683462397,0.911579868532147,0.276516872303462,0.194860308839388,0,0,0.655219697692825,0.983091635014877,0.211312123358627,0.39997479170986,0.960225567247268,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0.107824811396682,1.41539347670307,0.218419276384028,13.0694048064599,2.12574920101683,1.61116493536703,0,0,0.315446980005013,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,0,0.231051332300676,1.1441462864015,0,2.78482710962785,0,0.40341013740704,0,0.785720083444267,1.14640342257068,0.295712172434091,0,0.781078098613847,0.206686796501184,0,0,0,0,1.23109871051734,0.511049710558381,0,0,0,0,0,0.806637912890455,0.171488009437418,0.0679697329768317,0,0.118193840883968,1.00108261702862,0,0,0,0,0.215927591218621,0.9555033757741,0,0,1.3948971044175,0,0,0.62164849248911,0,0,0.430227358820278,0.473328002922261,0.511280428554946,0,0.4582137370881,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.596852325484105,0,1.35535298446752,0.769583617218004,0,0,0,0.470317296361523,0.490296643507811,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0.299823467774787,0.71421575442263,0.705789743431384,0.401206833445841,0,0,0.143339583151451,0.946629373159108,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0.253397002022874,0.509944148709909,1.06886962106224,1.10273879441814,0.250707539292375,0,1.33982065078089,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.897054900644907,0.12729431655633,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.747091421144008,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.534893840235659,0.164201178899891,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,1.17447437874188,0,0,0,0,0.196709770113833,0.786021525498329,0.822405995998037,0,0,0.946895611469467,0,0,0,0.221533894583621,0.270803863765016,2.30564375506215,2.47112760363769,0.822189523018381,0.829050053357545,0.289803085735052,0,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0.234321431833797,0,0,0,0,0.647491777472526,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0,1.56919201590938,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.630809660135739,0.585707074963566,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0,0.170453254832202,0,0,0,0.893288987462089,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0.371606350251437,0.144269212976445,0.426851060090485,0,0.399158742865633,0,0.211673582723883,0,0,1.82587743226554,0,0,0,0.1605880751037,0,1.27753871307098,1.03051603426729,0.614481528616916,0,0.166849141711909,0,0.278406173895242,0,0.811367035427949,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0,0,0,0,0,1.15362711958732,2.53350489753592,0,0,0.503865495708552,0.102268682502155,0.369254416383208,0,0.449341755736634,1.25314822272926,1.02314474045374,0,0,1.11136990144637,0,0,0,1.04171104434093,0.262379999988587,0,0.227586896570999,0.762760950878299,1.18193840883968,0.689486746482929,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.46112780877612,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0.498635045700469,0,0,0.167821586975843,0.37950746544837,0.317873157960757,1.05499032264014,0,0,0,0,0,0,2.96521128680622,0.617819694732514,0.730953646538188,0,0,0,1.27718352450966,0.19566461893209,0.485560759068186,1.18375320854817,0,0,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,1.323967823502,0,0,0.569219092059585,0.277349346026277,0,0.0979923974143777,0.261177619741208,0.17472666824203,0.51595809741485,0.0967563312890851,0.292357268344742,0,0.0969890164884194,0.264768380074501,0,0.548167698587004,0.397429223405979,0,0.195551382734803,0,0.213452994739353,0.799238438328521,0.288180834308212,0.229073192331831,0.343189995723929,2.3048767678104,0.49701014226173,0.235694034616795,0.271808412147228,0.104602846312333,0.101998217636322,0.866851769704557,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,2.32991899054908,0.0787831823072236,0,0.13480708770837,0,0.0846733320657845,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0.335434687599266,0,0,0.528001682597033,0.35857467866569,0.383830394638891,0,0,2.28841683889275,0,0,0,0,1.31348033198942,0.851940108927109,0.226624183040251,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0.243585196761792,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.691743174681154,0.124980407962107,0.606596470166591,0.856396000634902,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0.226705925512272,0,0.734210113519403,0,0.308801447160972,0.219284049578707,0.883445729729405,0.192914038270915,0,0.256241518587947,0.690860683462397,0.911579868532147,0.276516872303462,0.194860308839388,0,0,0.655219697692825,0.983091635014877,0.211312123358627,0.39997479170986,0.960225567247268,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0.107824811396682,1.41539347670307,0.218419276384028,13.0694048064599,2.12574920101683,1.61116493536703,0,0,0.315446980005013,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0,0,0.231051332300676,1.1441462864015,0,2.78482710962785,0,0.40341013740704,0,0.785720083444267,1.14640342257068,0.295712172434091,0,0.781078098613847,0.206686796501184,0,0,0,0,1.23109871051734,0.511049710558381,0,0,0,0,0,0.806637912890455,0.171488009437418,0.0679697329768317,0,0.118193840883968,1.00108261702862,0,0,0,0,0.215927591218621,0.9555033757741,0,0,1.3948971044175,0,0,0.62164849248911,0,0,0.430227358820278,0.473328002922261,0.511280428554946,0,0.4582137370881,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.596852325484105,0,1.35535298446752,0.769583617218004,0,0,0,0.470317296361523,0.490296643507811,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0.299823467774787,0.71421575442263,0.705789743431384,0.401206833445841,0,0,0.143339583151451,0.946629373159108,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0.253397002022874,0.509944148709909,1.06886962106224,1.10273879441814,0.250707539292375,0,1.33982065078089,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.897054900644907,0.12729431655633,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.747091421144008,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p@chr8:129056472..129056485,+ | |short_description=p@chr8:129056472..129056485,+ | ||
}} | }} |
Latest revision as of 14:58, 31 July 2015
Short description: | p@chr8:129056472..129056485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:129056472..129056485, + |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 7.84e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.46e-12 | 10 |
germ cell and embryonal cancer | 1.00e-09 | 22 |
germ cell cancer | 1.00e-09 | 22 |
cancer | 2.70e-09 | 235 |
disease of cellular proliferation | 5.63e-09 | 239 |
cell type cancer | 1.35e-07 | 143 |