FFCP PHASE1:Mm9::chr19:34317948..34317962,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1171 | |MCL_coexpression_id=1171 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:34317948..34317962,+ | |||
|description=CAGE_peak_at_chr19:34317948..34317962,+ | |description=CAGE_peak_at_chr19:34317948..34317962,+ | ||
|id=chr19:34317948..34317962,+ | |id=chr19:34317948..34317962,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.97e-09,8;CL:0000128,1.78e-07,6;CL:0000126,1.78e-07,6;CL:0000127,1.78e-07,6;CL:0000333,2.76e-07,10;CL:0000095,2.76e-07,10;CL:0000243,2.76e-07,10;CL:0000123,2.76e-07,10;CL:0000125,2.76e-07,10;CL:0000030,2.76e-07,10;CL:0000339,2.76e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.71e-10!23;UBERON:0001009!2.71e-10!23;UBERON:0007100!1.24e-09!18;UBERON:0000948!1.24e-09!18;UBERON:0005498!1.24e-09!18;UBERON:0004140!1.24e-09!18;UBERON:0009881!1.24e-09!18;UBERON:0004141!1.24e-09!18;UBERON:0003084!1.24e-09!18;UBERON:0007005!1.24e-09!18;UBERON:0004139!1.24e-09!18;UBERON:0004291!1.24e-09!18;UBERON:0004872!1.75e-07!33 | |ontology_enrichment_uberon=UBERON:0004535!2.71e-10!23;UBERON:0001009!2.71e-10!23;UBERON:0007100!1.24e-09!18;UBERON:0000948!1.24e-09!18;UBERON:0005498!1.24e-09!18;UBERON:0004140!1.24e-09!18;UBERON:0009881!1.24e-09!18;UBERON:0004141!1.24e-09!18;UBERON:0003084!1.24e-09!18;UBERON:0007005!1.24e-09!18;UBERON:0004139!1.24e-09!18;UBERON:0004291!1.24e-09!18;UBERON:0004872!1.75e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.90e-08,18;UBERON:0000948,1.90e-08,18;UBERON:0005498,1.90e-08,18;UBERON:0004140,1.90e-08,18;UBERON:0009881,1.90e-08,18;UBERON:0004141,1.90e-08,18;UBERON:0003084,1.90e-08,18;UBERON:0007005,1.90e-08,18;UBERON:0004139,1.90e-08,18;UBERON:0004291,1.90e-08,18;UBERON:0004535,1.95e-08,23;UBERON:0001009,1.95e-08,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,8.72100625521786,4.17403747195497,5.05517737593137,1.53985063787899,4.31257693094915,0,0,0,4.63066984864705,4.58453503902011,7.21940929188419,0,0,0,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,3.40860645156115,21.3024523774352,16.9602995764963,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,1.42575109390443,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.23674473558521,1.18058539048442,0.617068451549513,1.39520366850245,1.60964040839772,0.583826711835847,1.15191894939436,1.97000956894914,0.243206428637567,1.46199987425332,1.97595103761946,0.134206418760372,0,0,0,0.528901133327089,1.06644125267617,1.16118335930219,0.644337306610467,0.605050573870028,1.11189021922435,1.14135375667535,0.949058123089023,2.79988223030818,2.5133520880027,1.39269530428806,1.36474860983384,1.79763881730844,1.08069024937347,0.597423819763102,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.848725428875941,1.40814148973101,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.491589944147214,1.20879487306127,0.289298117163023,0,0,2.45882136509518,1.10374698521893,0.160550589987792,0,1.47541450839008,0.252470927204373,0,0,0,0,0,0,0,0.584511715822624,0,0,0.851640511249612,0.178065603667255,0.162886959353576,1.97964147567043,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0.661585194164886,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,1.1659233465194,0,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,2.48412283890143,2.71814784818809,5.24070152990826,5.39457385539283,2.31429676030941,4.4498510137285,1.55537967950151,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,1.3020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0,0.608175645870493,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,7.72758376128762,5.2551093126331,2.56412273974171,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.459483751644906,0,0.115884325944855,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,1.40358965067245,0,0.57386499620653,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.550640256485045,0,8.72100625521786,4.17403747195497,5.05517737593137,1.53985063787899,4.31257693094915,0,0,0,4.63066984864705,4.58453503902011,7.21940929188419,0,0,0,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,3.40860645156115,21.3024523774352,16.9602995764963,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,1.42575109390443,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.23674473558521,1.18058539048442,0.617068451549513,1.39520366850245,1.60964040839772,0.583826711835847,1.15191894939436,1.97000956894914,0.243206428637567,1.46199987425332,1.97595103761946,0.134206418760372,0,0,0,0.528901133327089,1.06644125267617,1.16118335930219,0.644337306610467,0.605050573870028,1.11189021922435,1.14135375667535,0.949058123089023,2.79988223030818,2.5133520880027,1.39269530428806,1.36474860983384,1.79763881730844,1.08069024937347,0.597423819763102,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0.848725428875941,1.40814148973101,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.491589944147214,1.20879487306127,0.289298117163023,0,0,2.45882136509518,1.10374698521893,0.160550589987792,0,1.47541450839008,0.252470927204373,0,0,0,0,0,0,0,0.584511715822624,0,0,0.851640511249612,0.178065603667255,0.162886959353576,1.97964147567043,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0.661585194164886,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,1.1659233465194,0,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,2.48412283890143,2.71814784818809,5.24070152990826,5.39457385539283,2.31429676030941,4.4498510137285,1.55537967950151,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,1.3020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0,0.608175645870493,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,7.72758376128762,5.2551093126331,2.56412273974171,1.2862102744744,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.459483751644906,0,0.115884325944855,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,1.40358965067245,0,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr19:34317948..34317962,+ | |short_description=p@chr19:34317948..34317962,+ | ||
}} | }} |
Latest revision as of 22:44, 3 August 2015
Short description: | p@chr19:34317948..34317962, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:34317948..34317962, + |
Coexpression cluster: | MCL_coexpression_mm9:1171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.97e-09 | 8 |
oligodendrocyte | 1.78e-07 | 6 |
macroglial cell | 1.78e-07 | 6 |
astrocyte | 1.78e-07 | 6 |
migratory neural crest cell | 2.76e-07 | 10 |
neuron associated cell | 2.76e-07 | 10 |
glial cell (sensu Vertebrata) | 2.76e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.76e-07 | 10 |
glial cell | 2.76e-07 | 10 |
glioblast | 2.76e-07 | 10 |
glioblast (sensu Vertebrata) | 2.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.90e-08 | 18 |
heart | 1.90e-08 | 18 |
primitive heart tube | 1.90e-08 | 18 |
primary heart field | 1.90e-08 | 18 |
anterior lateral plate mesoderm | 1.90e-08 | 18 |
heart tube | 1.90e-08 | 18 |
heart primordium | 1.90e-08 | 18 |
cardiac mesoderm | 1.90e-08 | 18 |
cardiogenic plate | 1.90e-08 | 18 |
heart rudiment | 1.90e-08 | 18 |
cardiovascular system | 1.95e-08 | 23 |
circulatory system | 1.95e-08 | 23 |