FFCP PHASE1:Mm9::chr3:79041833..79041844,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:79041833..79041844,+ | |||
|description=CAGE_peak_at_chr3:79041833..79041844,+ | |description=CAGE_peak_at_chr3:79041833..79041844,+ | ||
|id=chr3:79041833..79041844,+ | |id=chr3:79041833..79041844,+ | ||
|ontology_enrichment_celltype=CL:0000838!7.69e-24!12;CL:0000791!3.89e-22!9;CL:0000789!3.89e-22!9;CL:0002420!3.89e-22!9;CL:0002419!3.89e-22!9;CL:0000790!3.89e-22!9;CL:0000988!7.81e-22!32;CL:0002032!7.81e-22!32;CL:0000037!7.81e-22!32;CL:0000566!7.81e-22!32;CL:0000837!7.81e-22!32;CL:0000542!7.89e-22!13;CL:0000051!7.89e-22!13;CL:0000084!1.30e-21!11;CL:0000827!1.30e-21!11;CL:0000624!9.80e-20!8;CL:0000738!3.74e-16!17;CL:0002087!3.74e-16!17;CL:0002320!1.01e-15!46;CL:0000134!1.01e-15!46;CL:0000893!9.24e-15!6;CL:0002489!9.24e-15!6;CL:0000898!9.24e-15!6;CL:0000809!9.24e-15!6;CL:0000810!9.24e-15!6;CL:0000895!9.24e-15!6;CL:0000808!9.24e-15!6;CL:0000894!9.24e-15!6;CL:0000806!9.24e-15!6;CL:0000807!9.24e-15!6;CL:0000805!9.24e-15!6;CL:0002425!9.24e-15!6;CL:0002436!9.24e-15!6;CL:0002427!9.24e-15!6;CL:0002428!9.24e-15!6;CL:0002429!9.24e-15!6;CL:0002433!9.24e-15!6;CL:0002431!9.24e-15!6;CL:0002432!9.24e-15!6;CL:0002031!1.63e-14!25;CL:0000219!9.47e-13!54;CL:0000034!4.47e-10!97;CL:0000063!1.18e-09!66;CL:0000723!7.10e-09!91;CL:0000048!7.10e-09!91;CL:0000144!5.05e-07!121;CL:0000012!5.05e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.51e-16,9;CL:0000789,3.51e-16,9;CL:0002420,3.51e-16,9;CL:0002419,3.51e-16,9;CL:0000790,3.51e-16,9;CL:0000084,3.09e-13,11;CL:0000827,3.09e-13,11;CL:0000838,3.94e-12,12;CL:0000624,5.04e-12,8;CL:0000542,3.41e-11,13;CL:0000051,3.41e-11,13;CL:0000988,1.08e-10,32;CL:0002032,1.08e-10,32;CL:0000037,1.08e-10,32;CL:0000837,1.08e-10,32;CL:0000738,1.53e-08,17;CL:0002087,1.53e-08,17;CL:0002031,4.90e-08,25;CL:0000034,3.28e-07,97;CL:0002320,3.47e-07,46;CL:0000134,3.47e-07,46;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1;CL:0000625,5.53e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!2.05e-09!3;DOID:4045!2.05e-09!3 | |ontology_enrichment_disease=DOID:0060100!2.05e-09!3;DOID:4045!2.05e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.93e-19,3;DOID:4045,3.93e-19,3;DOID:0050686,7.51e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.01e-15!46;UBERON:0002193!3.90e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.47e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.703943610758334,0.936258105287974,0.171217968225505,0.0797721589953364,1.36960583944965,2.09808965805594,0,0,0,0,0.137114433605739,1.27316895539409,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,3.1253413780952,4.18818995179039,14.7057872007754,4.78131839470912,2.91306211818692,0,0,0,0,0,0,0,0,0,0.671130424230945,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,1.53946597556024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.703943610758334,0.936258105287974,0.171217968225505,0.0797721589953364,1.36960583944965,2.09808965805594,0,0,0,0,0.137114433605739,1.27316895539409,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,3.1253413780952,4.18818995179039,14.7057872007754,4.78131839470912,2.91306211818692,0,0,0,0,0,0,0,0,0,0.671130424230945,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,1.53946597556024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:79041833..79041844,+ | |short_description=p@chr3:79041833..79041844,+ | ||
}} | }} |
Latest revision as of 00:47, 4 August 2015
Short description: | p@chr3:79041833..79041844, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:79041833..79041844, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.51e-16 | 9 |
alpha-beta T cell | 3.51e-16 | 9 |
immature T cell | 3.51e-16 | 9 |
mature T cell | 3.51e-16 | 9 |
immature alpha-beta T cell | 3.51e-16 | 9 |
T cell | 3.09e-13 | 11 |
pro-T cell | 3.09e-13 | 11 |
lymphoid lineage restricted progenitor cell | 3.94e-12 | 12 |
CD4-positive, alpha-beta T cell | 5.04e-12 | 8 |
lymphocyte | 3.41e-11 | 13 |
common lymphoid progenitor | 3.41e-11 | 13 |
hematopoietic cell | 1.08e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.08e-10 | 32 |
hematopoietic stem cell | 1.08e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.08e-10 | 32 |
leukocyte | 1.53e-08 | 17 |
nongranular leukocyte | 1.53e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 4.90e-08 | 25 |
stem cell | 3.28e-07 | 97 |
connective tissue cell | 3.47e-07 | 46 |
mesenchymal cell | 3.47e-07 | 46 |
regulatory T cell | 3.67e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.67e-07 | 1 |
CD8-positive, alpha-beta T cell | 5.53e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.47e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.93e-19 | 3 |
muscle cancer | 3.93e-19 | 3 |
organ system cancer | 7.51e-10 | 6 |