FFCP PHASE1:Mm9::chr2:13501748..13501783,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=501 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:13501748..13501783,+ | |||
|description=CAGE_peak_at_chr2:13501748..13501783,+ | |description=CAGE_peak_at_chr2:13501748..13501783,+ | ||
|id=chr2:13501748..13501783,+ | |id=chr2:13501748..13501783,+ | ||
|ontology_enrichment_celltype=CL:0000333!7.24e-08!10;CL:0000095!7.24e-08!10;CL:0000243!7.24e-08!10;CL:0000123!7.24e-08!10;CL:0000125!7.24e-08!10;CL:0000030!7.24e-08!10;CL:0000339!7.24e-08!10;CL:0000055!7.93e-07!50 | |ontology_enrichment_celltype=CL:0000333!7.24e-08!10;CL:0000095!7.24e-08!10;CL:0000243!7.24e-08!10;CL:0000123!7.24e-08!10;CL:0000125!7.24e-08!10;CL:0000030!7.24e-08!10;CL:0000339!7.24e-08!10;CL:0000055!7.93e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.42e-11,10;CL:0000095,2.42e-11,10;CL:0000243,2.42e-11,10;CL:0000123,2.42e-11,10;CL:0000125,2.42e-11,10;CL:0000030,2.42e-11,10;CL:0000339,2.42e-11,10;CL:0002453,2.61e-09,8;CL:0000128,1.66e-07,6;CL:0000126,1.66e-07,6;CL:0000127,1.66e-07,6;CL:0000355,2.13e-07,9;CL:0000557,3.55e-07,7;CL:0000680,6.79e-07,6;CL:0000187,6.79e-07,6;CL:0000056,6.79e-07,6;CL:0000219,7.68e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.13e-07,9;UBERON:0002036,2.13e-07,9;UBERON:0002385,2.13e-07,9;UBERON:0000486,2.13e-07,9;UBERON:0007503,2.13e-07,9;UBERON:0001015,2.13e-07,9;UBERON:0002329,2.13e-07,9;UBERON:0003082,2.13e-07,9;UBERON:0003059,2.13e-07,9;UBERON:0007282,2.13e-07,9;UBERON:0004290,2.13e-07,9;UBERON:0009618,2.13e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.171200729931206,0.524522414513984,0.666219523631325,0,0,0.788655413395594,0.274228867211478,0.42438965179803,0.425216450755349,0.695036658406197,1.30599894569468,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,6.27797446105362,0.7813353445238,3.66466620781659,1.17646297606203,2.73218193983378,1.94204141212461,4.65818226509636,3.95370031756107,3.30384153891027,3.9119567217402,7.41285531693518,13.8402295122717,13.026803237977,10.3589952002768,12.9377307928474,0.167782606057736,0.725362142011344,0.672187598284928,12.6057123657614,7.16333599846892,4.64104883049698,0.202316460859598,0.528990979272033,0.633831403506179,4.06613438482959,1.77858959222228,3.1496490104849,8.89979726310277,1.4209602298922,5.69240209984969,5.37905627450176,0.414758449233911,2.02508907497536,0.841299845405528,0.285650984403804,1.98781686856452,0.367472397644862,0.670918297127655,0,0,0,0,0.263772575460388,1.00636407962651,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,1.13897344639282,0.186399445825301,12.6462742866417,9.14415877292105,0.579728977403356,0,0,0,0,0,0,13.6344258062446,11.950156211732,14.1335829804136,0.422530259330042,5.13305909657271,2.54805239706646,7.11066703153331,0,0,0,0,0.258937883647172,0,1.21439728736295,1.21786191324856,0.691846491768175,0.753613202763113,0.705532242814229,0.251333182659351,0,1.44599356919912,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0.209446706813455,0,5.87094110079009,0.599902730993408,4.3203877204842,0,0,0.125654352112864,0,0,0,0,2.24046600470696,0.124406970610093,0,0,0.390361328888111,1.14951052216736,0.900310649026746,1.05493372485001,0.476255494059295,0.384341160854549,0.655912071918102,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,1.39023624612799,1.39300866608867,1.85203922767149,0.995171334092466,1.40442637462647,2.57347907114715,2.55747149456033,0.414251545071004,0.703578179943289,2.70093092191522,1.89395788468168,0.787056926989615,1.23413690309903,1.62773761325285,1.3413670069981,1.05088808130453,1.97471819896177,1.47750717671186,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0.205809224758569,0,0,0,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.685491075658373,0,0.407302655690628,0.193952487167626,0.561086559122548,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,4.31304619582064,0,0.312037673114561,0,0,0,1.47802552133284,0.37898282354097,0.977789858652155,1.86719594352707,1.87752198630802,0.837531287209079,1.42826184531608,1.56106918286239,0.945810864637146,0.8858587585951,0.478364305972461,1.14704320301017,1.72684981865896,1.15719246865209,18.0949540727127,6.52686820582452,0,0.275936746304732,0,0,3.27869890753351,0.252470927204373,1.89304931649754,3.12350995437311,0.646270193198397,2.86762557543062,2.00518806674155,1.13230612315533,0.404810701674894,2.63030272120181,1.18586333383957,0,0.141940085208269,1.78065603667255,0.81443479676788,0.659880491890142,0,0.971122544619926,0,0.754420319023592,0.590603785761546,0,1.29214146584111,0.363533729477506,0.712994756769443,0,0,0,0,0.540183282093931,0.776152102696527,0.428674070063185,0.177340233642274,1.07021290561242,0.493647061806363,1.2178597964584,0,0.21183207086382,0,0.49465875882444,1.29171541356724,0.663442174209714,0.716234064018819,0.164140899745061,0.291480836629851,0,0.341741761595705,0.619160603889667,0.555583582109135,0.941842285023455,0.136694227721025,0,3.0596117398894,1.39951452323658,2.3493995546752,0.954670618015114,0.790839983952838,0.203319467126849,0.540026704109006,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0.259229946583586,0,0.56369293868419,1.04661582230785,0.66183396182839,0.777804753376191,1.6790777052105,1.68956125490778,2.34714477291508,1.0416350787516,0.314578033277133,0.241584120826006,0,0,1.01362607645082,0.513554785824136,0,0,0,0.480781798079875,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0.62799699626633,0.335769232728157,0.19318959403219,1.12609485270709,0.549454872801795,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,1.11123363900808,1.23621034343337,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,1.12369808963859,0.448176066834085,0.459483751644906,0.952587382566147,0.927074607558844,0.77163688185482,0.412085900803307,0.883193520806384,2.40008476669791,0.354951612318675,0.238436189947321,1.45346416632329,0.376437521661322,0.676916863133412,1.46342378298218,1.31534855718921,1.08643291076689,0.561142271657738,0.355905054372522,1.0835493061312,0.818462086339379,0.464810523557898,0.964533054905707,1.24905288968973,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,2.08681052058379 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.171200729931206,0.524522414513984,0.666219523631325,0,0,0.788655413395594,0.274228867211478,0.42438965179803,0.425216450755349,0.695036658406197,1.30599894569468,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,6.27797446105362,0.7813353445238,3.66466620781659,1.17646297606203,2.73218193983378,1.94204141212461,4.65818226509636,3.95370031756107,3.30384153891027,3.9119567217402,7.41285531693518,13.8402295122717,13.026803237977,10.3589952002768,12.9377307928474,0.167782606057736,0.725362142011344,0.672187598284928,12.6057123657614,7.16333599846892,4.64104883049698,0.202316460859598,0.528990979272033,0.633831403506179,4.06613438482959,1.77858959222228,3.1496490104849,8.89979726310277,1.4209602298922,5.69240209984969,5.37905627450176,0.414758449233911,2.02508907497536,0.841299845405528,0.285650984403804,1.98781686856452,0.367472397644862,0.670918297127655,0,0,0,0,0.263772575460388,1.00636407962651,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,1.13897344639282,0.186399445825301,12.6462742866417,9.14415877292105,0.579728977403356,0,0,0,0,0,0,13.6344258062446,11.950156211732,14.1335829804136,0.422530259330042,5.13305909657271,2.54805239706646,7.11066703153331,0,0,0,0,0.258937883647172,0,1.21439728736295,1.21786191324856,0.691846491768175,0.753613202763113,0.705532242814229,0.251333182659351,0,1.44599356919912,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0.209446706813455,0,5.87094110079009,0.599902730993408,4.3203877204842,0,0,0.125654352112864,0,0,0,0,2.24046600470696,0.124406970610093,0,0,0.390361328888111,1.14951052216736,0.900310649026746,1.05493372485001,0.476255494059295,0.384341160854549,0.655912071918102,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,1.39023624612799,1.39300866608867,1.85203922767149,0.995171334092466,1.40442637462647,2.57347907114715,2.55747149456033,0.414251545071004,0.703578179943289,2.70093092191522,1.89395788468168,0.787056926989615,1.23413690309903,1.62773761325285,1.3413670069981,1.05088808130453,1.97471819896177,1.47750717671186,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0.205809224758569,0,0,0,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.685491075658373,0,0.407302655690628,0.193952487167626,0.561086559122548,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,4.31304619582064,0,0.312037673114561,0,0,0,1.47802552133284,0.37898282354097,0.977789858652155,1.86719594352707,1.87752198630802,0.837531287209079,1.42826184531608,1.56106918286239,0.945810864637146,0.8858587585951,0.478364305972461,1.14704320301017,1.72684981865896,1.15719246865209,18.0949540727127,6.52686820582452,0,0.275936746304732,0,0,3.27869890753351,0.252470927204373,1.89304931649754,3.12350995437311,0.646270193198397,2.86762557543062,2.00518806674155,1.13230612315533,0.404810701674894,2.63030272120181,1.18586333383957,0,0.141940085208269,1.78065603667255,0.81443479676788,0.659880491890142,0,0.971122544619926,0,0.754420319023592,0.590603785761546,0,1.29214146584111,0.363533729477506,0.712994756769443,0,0,0,0,0.540183282093931,0.776152102696527,0.428674070063185,0.177340233642274,1.07021290561242,0.493647061806363,1.2178597964584,0,0.21183207086382,0,0.49465875882444,1.29171541356724,0.663442174209714,0.716234064018819,0.164140899745061,0.291480836629851,0,0.341741761595705,0.619160603889667,0.555583582109135,0.941842285023455,0.136694227721025,0,3.0596117398894,1.39951452323658,2.3493995546752,0.954670618015114,0.790839983952838,0.203319467126849,0.540026704109006,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0.259229946583586,0,0.56369293868419,1.04661582230785,0.66183396182839,0.777804753376191,1.6790777052105,1.68956125490778,2.34714477291508,1.0416350787516,0.314578033277133,0.241584120826006,0,0,1.01362607645082,0.513554785824136,0,0,0,0.480781798079875,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0.62799699626633,0.335769232728157,0.19318959403219,1.12609485270709,0.549454872801795,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.551530525350042,1.11123363900808,1.23621034343337,0.64183841918363,0.252697211763798,1.01391719956096,0.188626341386076,1.12369808963859,0.448176066834085,0.459483751644906,0.952587382566147,0.927074607558844,0.77163688185482,0.412085900803307,0.883193520806384,2.40008476669791,0.354951612318675,0.238436189947321,1.45346416632329,0.376437521661322,0.676916863133412,1.46342378298218,1.31534855718921,1.08643291076689,0.561142271657738,0.355905054372522,1.0835493061312,0.818462086339379,0.464810523557898,0.964533054905707,1.24905288968973,0.935726433781634,0.859484216193193,0.956441660344217,1.10295709559758,2.08681052058379 | ||
|short_description=p@chr2:13501748..13501783,+ | |short_description=p@chr2:13501748..13501783,+ | ||
}} | }} |
Latest revision as of 03:23, 4 August 2015
Short description: | p@chr2:13501748..13501783, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:13501748..13501783, + |
Coexpression cluster: | MCL_coexpression_mm9:501 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.42e-11 | 10 |
neuron associated cell | 2.42e-11 | 10 |
glial cell (sensu Vertebrata) | 2.42e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.42e-11 | 10 |
glial cell | 2.42e-11 | 10 |
glioblast | 2.42e-11 | 10 |
glioblast (sensu Vertebrata) | 2.42e-11 | 10 |
oligodendrocyte precursor cell | 2.61e-09 | 8 |
oligodendrocyte | 1.66e-07 | 6 |
macroglial cell | 1.66e-07 | 6 |
astrocyte | 1.66e-07 | 6 |
multi-potent skeletal muscle stem cell | 2.13e-07 | 9 |
granulocyte monocyte progenitor cell | 3.55e-07 | 7 |
muscle precursor cell | 6.79e-07 | 6 |
muscle cell | 6.79e-07 | 6 |
myoblast | 6.79e-07 | 6 |
motile cell | 7.68e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.13e-07 | 9 |
striated muscle tissue | 2.13e-07 | 9 |
muscle tissue | 2.13e-07 | 9 |
multilaminar epithelium | 2.13e-07 | 9 |
epithelial vesicle | 2.13e-07 | 9 |
musculature | 2.13e-07 | 9 |
somite | 2.13e-07 | 9 |
myotome | 2.13e-07 | 9 |
presomitic mesoderm | 2.13e-07 | 9 |
presumptive segmental plate | 2.13e-07 | 9 |
dermomyotome | 2.13e-07 | 9 |
trunk paraxial mesoderm | 2.13e-07 | 9 |