FFCP PHASE1:Mm9::chr3:90417204..90417214,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1063 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:90417204..90417214,+ | |||
|description=CAGE_peak_at_chr3:90417204..90417214,+ | |description=CAGE_peak_at_chr3:90417204..90417214,+ | ||
|id=chr3:90417204..90417214,+ | |id=chr3:90417204..90417214,+ | ||
|ontology_enrichment_celltype=CL:0000128!7.99e-16!6;CL:0000126!7.99e-16!6;CL:0000127!7.99e-16!6;CL:0000333!8.39e-16!10;CL:0000095!8.39e-16!10;CL:0000243!8.39e-16!10;CL:0000123!8.39e-16!10;CL:0000125!8.39e-16!10;CL:0000030!8.39e-16!10;CL:0000339!8.39e-16!10;CL:0002453!1.13e-11!8;CL:0000680!3.01e-10!6;CL:0000183!3.01e-10!6;CL:0000187!3.01e-10!6;CL:0000056!3.01e-10!6;CL:0000355!1.70e-09!9;CL:0000068!9.79e-09!3;CL:0002202!9.79e-09!3;CL:0000069!9.79e-09!3;CL:0002632!9.79e-09!3;CL:0002368!9.79e-09!3;CL:0000307!9.79e-09!3;CL:0000377!9.79e-09!3;CL:0000222!9.83e-09!7;CL:0002371!3.02e-08!118;CL:0000144!6.70e-08!121;CL:0000012!6.70e-08!121;CL:0000192!6.77e-08!3;CL:0000359!6.77e-08!3;CL:0002539!6.77e-08!3;CL:0000514!6.77e-08!3;CL:0000548!1.10e-07!115;CL:0000004!1.10e-07!115;CL:0000255!1.10e-07!115;CL:0002321!8.15e-07!70;CL:0000220!8.15e-07!70;CL:0000708!8.97e-07!2 | |ontology_enrichment_celltype=CL:0000128!7.99e-16!6;CL:0000126!7.99e-16!6;CL:0000127!7.99e-16!6;CL:0000333!8.39e-16!10;CL:0000095!8.39e-16!10;CL:0000243!8.39e-16!10;CL:0000123!8.39e-16!10;CL:0000125!8.39e-16!10;CL:0000030!8.39e-16!10;CL:0000339!8.39e-16!10;CL:0002453!1.13e-11!8;CL:0000680!3.01e-10!6;CL:0000183!3.01e-10!6;CL:0000187!3.01e-10!6;CL:0000056!3.01e-10!6;CL:0000355!1.70e-09!9;CL:0000068!9.79e-09!3;CL:0002202!9.79e-09!3;CL:0000069!9.79e-09!3;CL:0002632!9.79e-09!3;CL:0002368!9.79e-09!3;CL:0000307!9.79e-09!3;CL:0000377!9.79e-09!3;CL:0000222!9.83e-09!7;CL:0002371!3.02e-08!118;CL:0000144!6.70e-08!121;CL:0000012!6.70e-08!121;CL:0000192!6.77e-08!3;CL:0000359!6.77e-08!3;CL:0002539!6.77e-08!3;CL:0000514!6.77e-08!3;CL:0000548!1.10e-07!115;CL:0000004!1.10e-07!115;CL:0000255!1.10e-07!115;CL:0002321!8.15e-07!70;CL:0000220!8.15e-07!70;CL:0000708!8.97e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.54e-26,6;CL:0000126,1.54e-26,6;CL:0000127,1.54e-26,6;CL:0000333,1.96e-22,10;CL:0000095,1.96e-22,10;CL:0000243,1.96e-22,10;CL:0000123,1.96e-22,10;CL:0000125,1.96e-22,10;CL:0000030,1.96e-22,10;CL:0000339,1.96e-22,10;CL:0002453,6.33e-20,8;CL:0000068,4.09e-19,3;CL:0002202,4.09e-19,3;CL:0000069,4.09e-19,3;CL:0002632,4.09e-19,3;CL:0002368,4.09e-19,3;CL:0000307,4.09e-19,3;CL:0000377,4.09e-19,3;CL:0000708,2.49e-14,2;CL:0002605,1.27e-13,2;CL:0002604,1.27e-13,2;CL:0000219,8.42e-11,54;CL:0000151,7.42e-10,3;CL:0000499,7.42e-10,3;CL:0000327,7.42e-10,3;CL:0002092,1.47e-09,3;CL:0002540,1.47e-09,3;CL:0002321,8.18e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.70e-09!9;UBERON:0002036!1.70e-09!9;UBERON:0002385!1.70e-09!9;UBERON:0000486!1.70e-09!9;UBERON:0001015!1.70e-09!9;UBERON:0004290!1.70e-09!9;UBERON:0003082!1.70e-09!9;UBERON:0003126!9.79e-09!3;UBERON:0001005!9.79e-09!3;UBERON:0007196!9.79e-09!3;UBERON:0001558!9.79e-09!3;UBERON:0000383!1.78e-08!10;UBERON:0001135!6.77e-08!3;UBERON:0004237!6.77e-08!3;UBERON:0004695!6.77e-08!3;UBERON:0002111!6.77e-08!3;UBERON:0004178!6.77e-08!3;UBERON:0002329!1.22e-07!11;UBERON:0003077!1.22e-07!11;UBERON:0003059!1.22e-07!11;UBERON:0007282!1.22e-07!11;UBERON:0009618!1.22e-07!11;UBERON:0007285!1.22e-07!11;UBERON:0003210!8.97e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.09e-19,3;UBERON:0001005,4.09e-19,3;UBERON:0007196,4.09e-19,3;UBERON:0001558,4.09e-19,3;UBERON:0003210,2.49e-14,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,4.69434806608824,0.218025156380447,1.75748946187577,1.74986909166855,3.21968769738334,1.43752564364972,0,0,0,0.771778308107841,0,1.03134418455488,0,0,0,6.09920157724438,4.4464739805557,0,1.97773272513395,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.807424709485281,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,4.69434806608824,0.218025156380447,1.75748946187577,1.74986909166855,3.21968769738334,1.43752564364972,0,0,0,0.771778308107841,0,1.03134418455488,0,0,0,6.09920157724438,4.4464739805557,0,1.97773272513395,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.807424709485281,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr3:90417204..90417214,+ | |short_description=p@chr3:90417204..90417214,+ | ||
}} | }} |
Latest revision as of 06:12, 4 August 2015
Short description: | p@chr3:90417204..90417214, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:90417204..90417214, + |
Coexpression cluster: | MCL_coexpression_mm9:1063 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.54e-26 | 6 |
macroglial cell | 1.54e-26 | 6 |
astrocyte | 1.54e-26 | 6 |
migratory neural crest cell | 1.96e-22 | 10 |
neuron associated cell | 1.96e-22 | 10 |
glial cell (sensu Vertebrata) | 1.96e-22 | 10 |
neuron associated cell (sensu Vertebrata) | 1.96e-22 | 10 |
glial cell | 1.96e-22 | 10 |
glioblast | 1.96e-22 | 10 |
glioblast (sensu Vertebrata) | 1.96e-22 | 10 |
oligodendrocyte precursor cell | 6.33e-20 | 8 |
duct epithelial cell | 4.09e-19 | 3 |
epithelial cell of tracheobronchial tree | 4.09e-19 | 3 |
branched duct epithelial cell | 4.09e-19 | 3 |
epithelial cell of lower respiratory tract | 4.09e-19 | 3 |
respiratory epithelial cell | 4.09e-19 | 3 |
tracheal epithelial cell | 4.09e-19 | 3 |
tracheoblast | 4.09e-19 | 3 |
leptomeningeal cell | 2.49e-14 | 2 |
astrocyte of the cerebral cortex | 1.27e-13 | 2 |
astrocyte of the hippocampus | 1.27e-13 | 2 |
motile cell | 8.42e-11 | 54 |
secretory cell | 7.42e-10 | 3 |
stromal cell | 7.42e-10 | 3 |
extracellular matrix secreting cell | 7.42e-10 | 3 |
bone marrow cell | 1.47e-09 | 3 |
mesenchymal stem cell of the bone marrow | 1.47e-09 | 3 |
embryonic cell | 8.18e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.09e-19 | 3 |
respiratory airway | 4.09e-19 | 3 |
tracheobronchial tree | 4.09e-19 | 3 |
lower respiratory tract | 4.09e-19 | 3 |
blood-cerebrospinal fluid barrier | 2.49e-14 | 2 |