FFCP PHASE1:Mm9::chr3:95462528..95462547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:95462528..95462547,- | |||
|description=CAGE_peak_at_chr3:95462528..95462547,- | |description=CAGE_peak_at_chr3:95462528..95462547,- | ||
|id=chr3:95462528..95462547,- | |id=chr3:95462528..95462547,- | ||
|ontology_enrichment_celltype=CL:0000063!1.90e-13!66;CL:0000988!5.30e-13!32;CL:0002032!5.30e-13!32;CL:0000037!5.30e-13!32;CL:0000566!5.30e-13!32;CL:0000837!5.30e-13!32;CL:0002320!2.63e-11!46;CL:0000134!2.63e-11!46;CL:0000034!1.22e-10!97;CL:0000144!1.84e-10!121;CL:0000012!1.84e-10!121;CL:0000049!1.91e-09!19;CL:0000723!3.41e-09!91;CL:0000048!3.41e-09!91;CL:0002031!4.21e-09!25;CL:0002371!4.51e-09!118;CL:0000219!1.41e-08!54;CL:0000548!9.55e-08!115;CL:0000004!9.55e-08!115;CL:0000255!9.55e-08!115;CL:0000763!1.64e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.09e-20,19;CL:0000988,3.81e-19,32;CL:0002032,3.81e-19,32;CL:0000037,3.81e-19,32;CL:0000837,3.81e-19,32;CL:0002320,3.29e-17,46;CL:0000134,3.29e-17,46;CL:0000763,8.33e-15,16;CL:0000219,6.48e-14,54;CL:0000034,1.14e-11,97;CL:0002031,2.41e-10,25;CL:0000839,1.40e-09,13;CL:0000723,2.75e-09,91;CL:0000048,2.75e-09,91;CL:0000050,3.60e-08,9;CL:0000557,3.93e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.78e-10,6;DOID:0060100,1.14e-08,3;DOID:4045,1.14e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.63e-11!46;UBERON:0002371!7.34e-09!16;UBERON:0002193!1.26e-07!48;UBERON:0001474!6.71e-07!22;UBERON:0004765!6.71e-07!22;UBERON:0001434!6.71e-07!22;UBERON:0002204!7.36e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.29e-17,46;UBERON:0002371,3.55e-12,16;UBERON:0002204,1.55e-09,32;UBERON:0001474,2.52e-08,22;UBERON:0004765,2.52e-08,22;UBERON:0001434,2.52e-08,22;UBERON:0002193,4.21e-07,48;UBERON:0002405,4.21e-07,48 | |||
|phase1_expression=0.960893082628764,1.04692622291808,0,2.41971369045464,1.50268718983904,0.33575854382378,0.700837921786577,1.80772652818207,2.956563165185,2.57470978954193,0.856089841127525,0.319088635981346,0.513602189793617,0.961624426608971,0.999329285446988,1.01237633694913,0.699561878128147,2.36596624018678,2.74228867211478,2.54633791078818,0.0850432901510698,0.794327609607082,0.783599367416806,0.319984845586813,0.91763712426868,0,0.86152399231815,0.215471232685889,0,0,0.443461021310609,1.90509202037889,1.84519436275371,0,0.577703239502549,0.664938581433969,0.612508068787107,25.9489611056883,28.1280724028568,19.8939022710043,71.1760100517527,46.4470929771743,21.3624555333708,0.377690453926732,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0.286533439938757,0,0.404632921719196,0,0,0,0,1.7997994345628,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0,0.559198337475902,0.227178579999552,0.302286240427142,9.56552812715537,0.860423876981386,2.719885334831,0.539703191637817,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,1.08245520505607,1.26679932737549,0.505524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0,0.304465478312141,0.461230994512117,0,0.117588707135705,0.251333182659351,0.494389935468748,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,6.4700167233197,6.59893004092748,4.44745794755726,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0.505445516867349,0,0,0,0,0,0.204109497453984,0.2562274405697,0.281105173679186,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,2.80885274925294,3.60287069960601,3.12579849335152,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0.793351699990633,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0.195133647857799,0,0.664394068946325,0.478364305972461,0.655453258862952,0.518054945597687,0.723245292907558,6.03165135757089,1.08781136763742,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.395287777946524,0,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0,1.19609616558497,0.619160603889667,1.11116716421827,0,0.546776910884101,0.228778173206523,8.15896463970505,9.6566502103324,5.66619892598138,0,0.632671987162271,0,0,0.418176592028937,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0,0.168956125490778,0,0.2604087696879,0.314578033277133,0.966336483304024,0.864090018773596,0.948033361884535,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0.358855426437903,0.503653849092235,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.407412341537585,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0.960893082628764,1.04692622291808,0,2.41971369045464,1.50268718983904,0.33575854382378,0.700837921786577,1.80772652818207,2.956563165185,2.57470978954193,0.856089841127525,0.319088635981346,0.513602189793617,0.961624426608971,0.999329285446988,1.01237633694913,0.699561878128147,2.36596624018678,2.74228867211478,2.54633791078818,0.0850432901510698,0.794327609607082,0.783599367416806,0.319984845586813,0.91763712426868,0,0.86152399231815,0.215471232685889,0,0,0.443461021310609,1.90509202037889,1.84519436275371,0,0.577703239502549,0.664938581433969,0.612508068787107,25.9489611056883,28.1280724028568,19.8939022710043,71.1760100517527,46.4470929771743,21.3624555333708,0.377690453926732,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0.286533439938757,0,0.404632921719196,0,0,0,0,1.7997994345628,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0,0.559198337475902,0.227178579999552,0.302286240427142,9.56552812715537,0.860423876981386,2.719885334831,0.539703191637817,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,1.08245520505607,1.26679932737549,0.505524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0,0.304465478312141,0.461230994512117,0,0.117588707135705,0.251333182659351,0.494389935468748,0,0,0,0,0.484875253135222,0,0,0.209446706813455,0,6.4700167233197,6.59893004092748,4.44745794755726,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0.505445516867349,0,0,0,0,0,0.204109497453984,0.2562274405697,0.281105173679186,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,2.80885274925294,3.60287069960601,3.12579849335152,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0.793351699990633,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.196558995113203,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0.195133647857799,0,0.664394068946325,0.478364305972461,0.655453258862952,0.518054945597687,0.723245292907558,6.03165135757089,1.08781136763742,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0.395287777946524,0,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.65954501176592,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0,1.19609616558497,0.619160603889667,1.11116716421827,0,0.546776910884101,0.228778173206523,8.15896463970505,9.6566502103324,5.66619892598138,0,0.632671987162271,0,0,0.418176592028937,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.330916980914195,0.388902376688095,0,0.168956125490778,0,0.2604087696879,0.314578033277133,0.966336483304024,0.864090018773596,0.948033361884535,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0.358855426437903,0.503653849092235,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.407412341537585,0.561142271657738,0,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr3:95462528..95462547,- | |short_description=p@chr3:95462528..95462547,- | ||
}} | }} |
Latest revision as of 08:35, 4 August 2015
Short description: | p@chr3:95462528..95462547, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95462528..95462547, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.09e-20 | 19 |
hematopoietic cell | 3.81e-19 | 32 |
hematopoietic oligopotent progenitor cell | 3.81e-19 | 32 |
hematopoietic stem cell | 3.81e-19 | 32 |
hematopoietic multipotent progenitor cell | 3.81e-19 | 32 |
connective tissue cell | 3.29e-17 | 46 |
mesenchymal cell | 3.29e-17 | 46 |
myeloid cell | 8.33e-15 | 16 |
motile cell | 6.48e-14 | 54 |
stem cell | 1.14e-11 | 97 |
hematopoietic lineage restricted progenitor cell | 2.41e-10 | 25 |
myeloid lineage restricted progenitor cell | 1.40e-09 | 13 |
somatic stem cell | 2.75e-09 | 91 |
multi fate stem cell | 2.75e-09 | 91 |
megakaryocyte-erythroid progenitor cell | 3.60e-08 | 9 |
granulocyte monocyte progenitor cell | 3.93e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.29e-17 | 46 |
bone marrow | 3.55e-12 | 16 |
musculoskeletal system | 1.55e-09 | 32 |
bone element | 2.52e-08 | 22 |
skeletal element | 2.52e-08 | 22 |
skeletal system | 2.52e-08 | 22 |
hemolymphoid system | 4.21e-07 | 48 |
immune system | 4.21e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.78e-10 | 6 |
musculoskeletal system cancer | 1.14e-08 | 3 |
muscle cancer | 1.14e-08 | 3 |