FFCP PHASE1:Mm9::chr10:57814735..57814738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=110829|HGNC=|MCL_coexpression_id=3|UniProt=Q99JW4|association_with_transcript=-127bp_to_ENSMUST00000171162,uc011xeb.1_5end|description=CAGE_peak_12_at_Lims1_5end|id=chr10:57814735..57814738,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-15,9|ontology_enrichment_disease=DOID:0060100!2.67e-07!3;DOID:4045!2.67e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-43,3;DOID:4045,1.75e-43,3;DOID:0050686,3.12e-22,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-15,9;UBERON:0002036,4.12e-15,9;UBERON:0002385,4.12e-15,9;UBERON:0000486,4.12e-15,9;UBERON:0007503,4.12e-15,9;UBERON:0001015,4.12e-15,9;UBERON:0002329,4.12e-15,9;UBERON:0003082,4.12e-15,9;UBERON:0003059,4.12e-15,9;UBERON:0007282,4.12e-15,9;UBERON:0004290,4.12e-15,9;UBERON:0009618,4.12e-15,9;UBERON:0000383,1.11e-13,10;UBERON:0007524,1.65e-12,11;UBERON:0003077,1.65e-12,11;UBERON:0007285,1.65e-12,11|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0,0.404950534779652,0,0.473193248037357,0,0,0,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,7.813353445238,6.28228492768558,15.2940186888064,6.83045484958446,11.1667381197165,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p12@Lims1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110829 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99JW4 | |||
|association_with_transcript=-127bp_to_ENSMUST00000171162,uc011xeb.1_5end | |||
|cluster_id=chr10:57814735..57814738,+ | |||
|description=CAGE_peak_12_at_Lims1_5end | |||
|id=chr10:57814735..57814738,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.67e-07!3;DOID:4045!2.67e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-43,3;DOID:4045,1.75e-43,3;DOID:0050686,3.12e-22,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-15,9;UBERON:0002036,4.12e-15,9;UBERON:0002385,4.12e-15,9;UBERON:0000486,4.12e-15,9;UBERON:0007503,4.12e-15,9;UBERON:0001015,4.12e-15,9;UBERON:0002329,4.12e-15,9;UBERON:0003082,4.12e-15,9;UBERON:0003059,4.12e-15,9;UBERON:0007282,4.12e-15,9;UBERON:0004290,4.12e-15,9;UBERON:0009618,4.12e-15,9;UBERON:0000383,1.11e-13,10;UBERON:0007524,1.65e-12,11;UBERON:0003077,1.65e-12,11;UBERON:0007285,1.65e-12,11 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0,0.404950534779652,0,0.473193248037357,0,0,0,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,7.813353445238,6.28228492768558,15.2940186888064,6.83045484958446,11.1667381197165,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Lims1 | |||
}} |
Revision as of 11:54, 4 August 2015
Short description: | p12@Lims1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Lims1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -127bp_to_ENSMUST00000171162, uc011xeb.1_5end |
EntrezGene: | 110829 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.12e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.12e-15 | 9 |
striated muscle tissue | 4.12e-15 | 9 |
muscle tissue | 4.12e-15 | 9 |
multilaminar epithelium | 4.12e-15 | 9 |
epithelial vesicle | 4.12e-15 | 9 |
musculature | 4.12e-15 | 9 |
somite | 4.12e-15 | 9 |
myotome | 4.12e-15 | 9 |
presomitic mesoderm | 4.12e-15 | 9 |
presumptive segmental plate | 4.12e-15 | 9 |
dermomyotome | 4.12e-15 | 9 |
trunk paraxial mesoderm | 4.12e-15 | 9 |
musculature of body | 1.11e-13 | 10 |
dense mesenchyme tissue | 1.65e-12 | 11 |
paraxial mesoderm | 1.65e-12 | 11 |
presumptive paraxial mesoderm | 1.65e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.75e-43 | 3 |
muscle cancer | 1.75e-43 | 3 |
organ system cancer | 3.12e-22 | 6 |