FFCP PHASE1:Mm9::chr12:102321149..102321183,+: Difference between revisions
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|id=chr12:102321149..102321183,+
|short_description=p1@ENSMUST00000055270,p1@uc011yqf.1
|description=CAGE_peak_1_at_ENSMUST00000055270_5end,CAGE_peak_1_at_uc011yqf.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=458bp_to_ENSMUST00000055270,uc011yqf.1_5end | |||
|cluster_id=chr12:102321149..102321183,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000055270_5end,CAGE_peak_1_at_uc011yqf.1_5end | |||
|id=chr12:102321149..102321183,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.44e-10,5;CL:0000222,5.81e-08,7;CL:0000223,9.74e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.85e-13,47;UBERON:0002365,1.41e-10,25;UBERON:0002330,1.41e-10,25;UBERON:0005256,4.69e-10,45;UBERON:0002107,2.44e-09,22;UBERON:0007499,2.44e-09,22;UBERON:0006925,2.44e-09,22;UBERON:0009497,2.44e-09,22;UBERON:0000015,2.44e-09,22;UBERON:0002423,2.44e-09,22;UBERON:0006235,2.44e-09,22;UBERON:0008835,2.44e-09,22;UBERON:0003894,2.44e-09,22;UBERON:0004161,2.44e-09,22;UBERON:0008836,2.44e-09,22;UBERON:0009854,8.52e-09,23;UBERON:0009856,8.52e-09,23;UBERON:0004535,1.39e-07,23;UBERON:0001009,1.39e-07,23;UBERON:0003104,6.58e-07,61;UBERON:0009142,6.58e-07,61;UBERON:0000490,7.63e-07,66 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0.60492842261366,0.500895729946347,0.671517087647559,1.16806320297763,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.510259740906419,0.198581902401771,0,1.43993180514066,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,3.02152363141385,2.63580021170738,0.734187008646726,0.782391344348039,1.30815093828268,2.63623419281366,2.72201858703997,0.279972843250725,0,0,0,0,1.28629718017973,2.29226751951005,1.54701627683233,0.202316460859598,0,0,0,0,0,0,1.4209602298922,2.69640099466564,6.53171119046643,0,0,0,0.856952953211411,0,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0.45839474333043,0,0.427115042397309,0,0.075726193333184,0.0755715601067855,4.34796733052517,5.16254326188832,4.75979933595425,9.71465744948071,12.9955283489534,16.5769948226014,3.37066608316204,1.87473354835864,0.779358013808606,2.82671659608272,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0.253359865475099,0,2.2836775943812,2.33044095282455,0.890652834388949,0,0,0,0.60289056221049,0.23517741427141,1.25666591329675,0.247194967734374,6.36237170447611,0.884610551949874,0.647067399789637,2.20841518460394,0,0,0,0.83778682725382,0.255457055208591,0,0,0.381210681219194,0.449371918214468,0,0.125654352112864,0,0,0.41557608911912,0,0.509196819251581,0.622034853050465,0.505445516867349,0.841767423545896,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0.823128545631774,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.308534225774757,0,0,0.583826711835847,0.329119699826961,1.80584210487005,1.86458261955468,1.46199987425332,1.97595103761946,1.8788898626452,0.630869845692382,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0.370191491765402,12.7474629647474,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0.744281895337007,1.24815069245824,4.79899868099512,3.04975602987251,5.78932225636041,0.739012760666419,0.37898282354097,0,0.339490171550376,0,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.159454768657487,0.983179888294428,1.38147985492716,0.723245292907558,0,1.08781136763742,0.491764273019036,1.10374698521893,0.963303539926752,0.35163505977661,0,3.02965112645248,0,0,0,0.238968797952552,0,0,0,0,0,0,0.709700426041343,1.42452482933804,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0.882113592219848,1.15420377059036,0.807322133479528,0.241251699712623,0.477489376012546,0.492422699235184,0,0.370850604021019,1.02522528478712,0.412773735926445,0.555583582109135,0,0.27338845544205,1.14389086603261,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,1.86401793926078,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.524296722128554,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0,0.240390899039938,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,0.467507608726276,1.58711268530648,0.221985953374065,0,0,1.73870634628971,1.50145980360946,0.183151624267265,1.50057865355346,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0,0,0.367687016900028,0,0,1.60459604795908,0,0.50695859978048,0,0,0.192075457214608,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0,0,0.593175090620871,0.197008964751127,0,0.77468420592983,0.964533054905707,0.249810577937946,1.40358965067245,0.214871054048298,0.956441660344217,0.882365676478062,2.31867835620421 | |phase1_expression=0,0.348975407639361,1.36499771816861,0.60492842261366,0.500895729946347,0.671517087647559,1.16806320297763,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.510259740906419,0.198581902401771,0,1.43993180514066,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,3.02152363141385,2.63580021170738,0.734187008646726,0.782391344348039,1.30815093828268,2.63623419281366,2.72201858703997,0.279972843250725,0,0,0,0,1.28629718017973,2.29226751951005,1.54701627683233,0.202316460859598,0,0,0,0,0,0,1.4209602298922,2.69640099466564,6.53171119046643,0,0,0,0.856952953211411,0,0,0,0,0,0,0.153606533256243,0,0,0,0.837548997004143,0,0.45839474333043,0,0.427115042397309,0,0.075726193333184,0.0755715601067855,4.34796733052517,5.16254326188832,4.75979933595425,9.71465744948071,12.9955283489534,16.5769948226014,3.37066608316204,1.87473354835864,0.779358013808606,2.82671659608272,0.14084341977668,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0.253359865475099,0,2.2836775943812,2.33044095282455,0.890652834388949,0,0,0,0.60289056221049,0.23517741427141,1.25666591329675,0.247194967734374,6.36237170447611,0.884610551949874,0.647067399789637,2.20841518460394,0,0,0,0.83778682725382,0.255457055208591,0,0,0.381210681219194,0.449371918214468,0,0.125654352112864,0,0,0.41557608911912,0,0.509196819251581,0.622034853050465,0.505445516867349,0.841767423545896,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0.823128545631774,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.308534225774757,0,0,0.583826711835847,0.329119699826961,1.80584210487005,1.86458261955468,1.46199987425332,1.97595103761946,1.8788898626452,0.630869845692382,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.189709611372772,0.295220295959204,0.156998727841375,0.370191491765402,12.7474629647474,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0.744281895337007,1.24815069245824,4.79899868099512,3.04975602987251,5.78932225636041,0.739012760666419,0.37898282354097,0,0.339490171550376,0,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.159454768657487,0.983179888294428,1.38147985492716,0.723245292907558,0,1.08781136763742,0.491764273019036,1.10374698521893,0.963303539926752,0.35163505977661,0,3.02965112645248,0,0,0,0.238968797952552,0,0,0,0,0,0,0.709700426041343,1.42452482933804,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,2.10837217149998,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0,0,0.21183207086382,0.882113592219848,1.15420377059036,0.807322133479528,0.241251699712623,0.477489376012546,0.492422699235184,0,0.370850604021019,1.02522528478712,0.412773735926445,0.555583582109135,0,0.27338845544205,1.14389086603261,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,1.86401793926078,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.13020438484395,0.524296722128554,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.358053391334963,0,0.240390899039938,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,0.467507608726276,1.58711268530648,0.221985953374065,0,0,1.73870634628971,1.50145980360946,0.183151624267265,1.50057865355346,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0,0,0.367687016900028,0,0,1.60459604795908,0,0.50695859978048,0,0,0.192075457214608,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0,0,0.593175090620871,0.197008964751127,0,0.77468420592983,0.964533054905707,0.249810577937946,1.40358965067245,0.214871054048298,0.956441660344217,0.882365676478062,2.31867835620421 | ||
|short_description=p1@ENSMUST00000055270,p1@uc011yqf.1 | |||
}} | }} |
Latest revision as of 14:15, 4 August 2015
Short description: | p1@ENSMUST00000055270, p1@uc011yqf.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000055270_5end, CAGE_peak_1_at_uc011yqf.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 458bp_to_ENSMUST00000055270, uc011yqf.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.44e-10 | 5 |
mesodermal cell | 5.81e-08 | 7 |
endodermal cell | 9.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.85e-13 | 47 |
exocrine gland | 1.41e-10 | 25 |
exocrine system | 1.41e-10 | 25 |
trunk mesenchyme | 4.69e-10 | 45 |
liver | 2.44e-09 | 22 |
epithelial sac | 2.44e-09 | 22 |
digestive gland | 2.44e-09 | 22 |
epithelium of foregut-midgut junction | 2.44e-09 | 22 |
anatomical boundary | 2.44e-09 | 22 |
hepatobiliary system | 2.44e-09 | 22 |
foregut-midgut junction | 2.44e-09 | 22 |
hepatic diverticulum | 2.44e-09 | 22 |
liver primordium | 2.44e-09 | 22 |
septum transversum | 2.44e-09 | 22 |
liver bud | 2.44e-09 | 22 |
digestive tract diverticulum | 8.52e-09 | 23 |
sac | 8.52e-09 | 23 |
cardiovascular system | 1.39e-07 | 23 |
circulatory system | 1.39e-07 | 23 |
mesenchyme | 6.58e-07 | 61 |
entire embryonic mesenchyme | 6.58e-07 | 61 |
unilaminar epithelium | 7.63e-07 | 66 |