FFCP PHASE1:Mm9::chr12:103965542..103965564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |MCL_coexpression_id=219 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:103965542..103965564,- | |||
|description=CAGE_peak_at_chr12:103965542..103965564,- | |description=CAGE_peak_at_chr12:103965542..103965564,- | ||
|id=chr12:103965542..103965564,- | |id=chr12:103965542..103965564,- | ||
|ontology_enrichment_celltype=CL:0000239!5.10e-19!6;CL:0000677!5.10e-19!6;CL:0000212!5.10e-19!6;CL:0000584!5.10e-19!6;CL:0002563!1.13e-16!9;CL:0002251!1.13e-16!9;CL:0000075!3.13e-16!7;CL:0000066!1.25e-11!25;CL:0000473!1.45e-11!3;CL:0000627!1.45e-11!3;CL:0000682!1.45e-11!3;CL:0002076!1.13e-09!15;CL:0000223!4.82e-07!20 | |ontology_enrichment_celltype=CL:0000239!5.10e-19!6;CL:0000677!5.10e-19!6;CL:0000212!5.10e-19!6;CL:0000584!5.10e-19!6;CL:0002563!1.13e-16!9;CL:0002251!1.13e-16!9;CL:0000075!3.13e-16!7;CL:0000066!1.25e-11!25;CL:0000473!1.45e-11!3;CL:0000627!1.45e-11!3;CL:0000682!1.45e-11!3;CL:0002076!1.13e-09!15;CL:0000223!4.82e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.47e-15,3;CL:0000239,3.74e-07,6;CL:0000677,3.74e-07,6;CL:0000584,3.74e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.89e-30!15;UBERON:0000160!1.61e-24!43;UBERON:0001242!6.06e-24!13;UBERON:0000060!6.06e-24!13;UBERON:0001262!6.06e-24!13;UBERON:0004786!6.06e-24!13;UBERON:0005409!6.69e-19!59;UBERON:0004923!7.80e-18!24;UBERON:0003350!1.13e-16!9;UBERON:0004808!1.13e-16!9;UBERON:0001277!1.13e-16!9;UBERON:0000485!1.71e-13!11;UBERON:0000331!1.57e-11!3;UBERON:0002116!1.57e-11!3;UBERON:0001204!1.57e-11!3;UBERON:0001168!1.57e-11!3;UBERON:0001007!1.47e-08!128;UBERON:0001555!1.47e-08!128;UBERON:0007026!1.47e-08!128;UBERON:0004119!2.32e-08!130;UBERON:0000925!2.32e-08!130;UBERON:0006595!2.32e-08!130;UBERON:0001155!5.29e-08!2;UBERON:0000059!5.29e-08!2;UBERON:0001962!9.13e-08!2;UBERON:0001961!9.13e-08!2;UBERON:0001744!9.13e-08!2;UBERON:0004921!9.26e-07!126;UBERON:0004185!9.26e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!6.89e-30!15;UBERON:0000160!1.61e-24!43;UBERON:0001242!6.06e-24!13;UBERON:0000060!6.06e-24!13;UBERON:0001262!6.06e-24!13;UBERON:0004786!6.06e-24!13;UBERON:0005409!6.69e-19!59;UBERON:0004923!7.80e-18!24;UBERON:0003350!1.13e-16!9;UBERON:0004808!1.13e-16!9;UBERON:0001277!1.13e-16!9;UBERON:0000485!1.71e-13!11;UBERON:0000331!1.57e-11!3;UBERON:0002116!1.57e-11!3;UBERON:0001204!1.57e-11!3;UBERON:0001168!1.57e-11!3;UBERON:0001007!1.47e-08!128;UBERON:0001555!1.47e-08!128;UBERON:0007026!1.47e-08!128;UBERON:0004119!2.32e-08!130;UBERON:0000925!2.32e-08!130;UBERON:0006595!2.32e-08!130;UBERON:0001155!5.29e-08!2;UBERON:0000059!5.29e-08!2;UBERON:0001962!9.13e-08!2;UBERON:0001961!9.13e-08!2;UBERON:0001744!9.13e-08!2;UBERON:0004921!9.26e-07!126;UBERON:0004185!9.26e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.37e-26,31;UBERON:0005409,6.53e-19,47;UBERON:0002108,2.11e-18,4;UBERON:0000344,3.02e-18,15;UBERON:0000331,1.05e-14,3;UBERON:0002116,1.05e-14,3;UBERON:0001204,1.05e-14,3;UBERON:0001168,1.05e-14,3;UBERON:0001242,3.58e-12,13;UBERON:0001262,3.58e-12,13;UBERON:0004786,3.58e-12,13;UBERON:0004923,5.00e-11,24;UBERON:0001155,4.66e-10,2;UBERON:0000059,4.66e-10,2;UBERON:0001962,9.54e-10,2;UBERON:0001961,9.54e-10,2;UBERON:0001744,9.54e-10,2;UBERON:0001007,2.04e-08,116;UBERON:0001555,2.04e-08,116;UBERON:0007026,2.04e-08,116;UBERON:0004119,3.16e-08,118;UBERON:0000925,3.16e-08,118;UBERON:0006595,3.16e-08,118;UBERON:0002465,8.98e-07,3 | |||
|phase1_expression=0,7.67745896806594,6.82498859084304,1.81478526784098,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.50582274561208,11.4846392823004,10.7690499039769,8.83432054012145,12.9215925230334,3.78045194639896,19.5122849376668,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81791246659797,0,0,0,0,0,0,9.01605216934572,0,0,0,0.19496408711912,7.19055526923377,3.45820879799511,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,7.67745896806594,6.82498859084304,1.81478526784098,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,5.50582274561208,11.4846392823004,10.7690499039769,8.83432054012145,12.9215925230334,3.78045194639896,19.5122849376668,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81791246659797,0,0,0,0,0,0,9.01605216934572,0,0,0,0.19496408711912,7.19055526923377,3.45820879799511,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:103965542..103965564,- | |short_description=p@chr12:103965542..103965564,- | ||
}} | }} |
Latest revision as of 14:41, 4 August 2015
Short description: | p@chr12:103965542..103965564, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:103965542..103965564, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.47e-15 | 3 |
brush border epithelial cell | 3.74e-07 | 6 |
gut absorptive cell | 3.74e-07 | 6 |
enterocyte | 3.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.37e-26 | 31 |
gastrointestinal system | 6.53e-19 | 47 |
small intestine | 2.11e-18 | 4 |
mucosa | 3.02e-18 | 15 |
ileal mucosa | 1.05e-14 | 3 |
ileum | 1.05e-14 | 3 |
mucosa of small intestine | 1.05e-14 | 3 |
wall of small intestine | 1.05e-14 | 3 |
intestinal mucosa | 3.58e-12 | 13 |
wall of intestine | 3.58e-12 | 13 |
gastrointestinal system mucosa | 3.58e-12 | 13 |
organ component layer | 5.00e-11 | 24 |
colon | 4.66e-10 | 2 |
large intestine | 4.66e-10 | 2 |
gut-associated lymphoid tissue | 9.54e-10 | 2 |
mucosa-associated lymphoid tissue | 9.54e-10 | 2 |
lymphoid tissue | 9.54e-10 | 2 |
digestive system | 2.04e-08 | 116 |
digestive tract | 2.04e-08 | 116 |
primitive gut | 2.04e-08 | 116 |
endoderm-derived structure | 3.16e-08 | 118 |
endoderm | 3.16e-08 | 118 |
presumptive endoderm | 3.16e-08 | 118 |
lymphoid system | 8.98e-07 | 3 |