FFCP PHASE1:Mm9::chr4:133574662..133574669,-: Difference between revisions
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{{FFCP|EntrezGene=83557|HGNC=|MCL_coexpression_id=97|UniProt=Q8K3Y3|association_with_transcript=61bp_to_NM_145833,uc008vdw.1_5end|description=CAGE_peak_2_at_Lin28a_5end|id=chr4:133574662..133574669,-|ontology_enrichment_celltype=CL:0000349!1.16e-30!3;CL:0000351!1.16e-30!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.16e-30!3;UBERON:0000307!1.16e-30!3;UBERON:0000991!3.55e-19!18;UBERON:0005564!3.55e-19!18;UBERON:0000473!3.20e-17!14;UBERON:0003135!4.33e-16!15;UBERON:0003101!4.24e-15!16;UBERON:0000079!4.24e-15!16;UBERON:0003133!2.13e-14!24;UBERON:0004176!3.18e-14!17;UBERON:0009196!3.18e-14!17;UBERON:0009117!3.18e-14!17;UBERON:0005156!2.71e-13!26;UBERON:0000990!2.71e-13!26;UBERON:0002323!2.47e-09!37;UBERON:0004458!2.47e-09!37;UBERON:0003886!4.37e-09!38;UBERON:0002553!7.50e-09!39|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0,0,0,0.13020438484395,0.838874755405687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21773311410723,5.11368982674011,5.03653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Lin28a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83557 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K3Y3 | |||
|association_with_transcript=61bp_to_NM_145833,uc008vdw.1_5end | |||
|cluster_id=chr4:133574662..133574669,- | |||
|description=CAGE_peak_2_at_Lin28a_5end | |||
|id=chr4:133574662..133574669,- | |||
|ontology_enrichment_celltype=CL:0000349!1.16e-30!3;CL:0000351!1.16e-30!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.16e-30!3;UBERON:0000307!1.16e-30!3;UBERON:0000991!3.55e-19!18;UBERON:0005564!3.55e-19!18;UBERON:0000473!3.20e-17!14;UBERON:0003135!4.33e-16!15;UBERON:0003101!4.24e-15!16;UBERON:0000079!4.24e-15!16;UBERON:0003133!2.13e-14!24;UBERON:0004176!3.18e-14!17;UBERON:0009196!3.18e-14!17;UBERON:0009117!3.18e-14!17;UBERON:0005156!2.71e-13!26;UBERON:0000990!2.71e-13!26;UBERON:0002323!2.47e-09!37;UBERON:0004458!2.47e-09!37;UBERON:0003886!4.37e-09!38;UBERON:0002553!7.50e-09!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0,0,0,0.13020438484395,0.838874755405687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21773311410723,5.11368982674011,5.03653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Lin28a | |||
}} |
Revision as of 22:15, 4 August 2015
Short description: | p2@Lin28a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lin28a_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 61bp_to_NM_145833, uc008vdw.1_5end |
EntrezGene: | 83557 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.58e-86 | 3 |
trophoblast cell | 1.58e-86 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.58e-86 | 3 |
blastula | 1.58e-86 | 3 |
cleaving embryo | 1.58e-86 | 3 |