FFCP PHASE1:Mm9::chr12:3235489..3235522,+: Difference between revisions
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{{FFCP|EntrezGene=74173|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=-3bp_to_uc007mwj.2_5end|description=CAGE_peak_1_at_1700012B15Rik_5end|id=chr12:3235489..3235522,+|ontology_enrichment_celltype=CL:0002031!4.40e-11!25;CL:0000988!6.48e-11!32;CL:0002032!6.48e-11!32;CL:0000037!6.48e-11!32;CL:0000566!6.48e-11!32;CL:0000837!6.48e-11!32;CL:0000838!1.88e-08!12;CL:0000084!9.13e-08!11;CL:0000827!9.13e-08!11;CL:0000738!1.54e-07!17;CL:0002087!1.54e-07!17;CL:0000791!2.98e-07!9;CL:0000789!2.98e-07!9;CL:0002420!2.98e-07!9;CL:0002419!2.98e-07!9;CL:0000790!2.98e-07!9;CL:0000542!7.05e-07!13;CL:0000051!7.05e-07!13|ontology_enrichment_celltype_v019_2=CL:0002031,4.40e-11,25;CL:0000988,6.48e-11,32;CL:0002032,6.48e-11,32;CL:0000037,6.48e-11,32;CL:0000837,6.48e-11,32;CL:0000838,1.88e-08,12;CL:0000084,9.13e-08,11;CL:0000827,9.13e-08,11;CL:0000738,1.54e-07,17;CL:0002087,1.54e-07,17;CL:0000791,2.98e-07,9;CL:0000789,2.98e-07,9;CL:0002420,2.98e-07,9;CL:0002419,2.98e-07,9;CL:0000790,2.98e-07,9;CL:0000542,7.05e-07,13;CL:0000051,7.05e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.35e-09!48;UBERON:0002390!2.65e-09!45;UBERON:0003061!2.65e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-09,48;UBERON:0002405,1.35e-09,48;UBERON:0002390,2.65e-09,45;UBERON:0003061,2.65e-09,45;UBERON:0007811,1.49e-07,36|phase1_expression=23.2215828301951,16.7508195666893,22.7499619694768,26.0119221723874,20.0358291978539,12.4230661214798,13.0823078733494,46.8717664092922,37.3090113701917,29.9602593692152,30.4767983441399,32.6268130290926,46.7377992712192,58.2219880110523,14.9899392817048,17.2103977281352,11.8925519281785,20.8205029136437,23.8579114473985,21.6438722416995,15.818051968099,22.539045922601,17.2391860831697,15.1992801653736,13.9939661450974,18.3754228516806,15.0766698655676,19.39241094173,15.5819203954227,11.8454160987167,11.5299865540758,25.4012269383852,20.9122027778754,31.6963362030877,12.9983228888074,7.14808975041517,8.37094360675713,36.8307835048479,19.533383613095,25.6526634547161,35.2938892818609,32.1031377930469,30.1016418879315,11.330713617802,10.5432008468295,7.52541683862894,12.5182615095686,9.15705656797875,15.378032791413,8.74934545834275,8.25919887589639,7.18762821824858,49.1603035749168,44.247090662692,53.7750078627942,15.9500850342287,14.0401385569991,11.3447860301037,13.5552028775931,14.8117474196169,10.775133859605,6.43804610931351,8.89294796111139,21.5975932147536,34.6103226898441,32.6820852875206,16.4780060785123,19.5951335713993,13.7907184370275,12.8255641415106,12.8298226424343,12.2829923293636,13.0312439161452,11.3916443269907,12.8432931164437,6.43453150627015,18.7196997698961,18.7700386985226,15.6678663921368,13.58428763621,12.5338071735301,16.1483144872596,19.5428099300967,15.1945904708554,17.1134037510027,18.2669722993674,11.6744778255264,9.87917062874093,16.3568577599678,16.3234569830657,27.5371264266594,12.9063581547208,13.599426674155,9.17495425784289,7.14754059192436,8.06448396775204,11.3759980306719,10.5666799998396,9.61208217030615,9.18682893726885,23.5208511027056,17.9657068380045,10.1922095882658,7.11066703153331,10.3915699685383,12.1612735428047,11.1215377903252,9.59144589640104,19.4203412735379,18.1099409659086,8.67426633830679,11.8741536541735,13.8369298353635,12.6607018064203,19.0493705559842,12.6923257242972,11.8653584512499,17.6411215442292,10.6153266233985,12.2942805960031,13.0296495891632,19.3950101254089,11.1835056730873,22.5441213698891,17.3840766655168,12.0064815948038,31.631192869563,26.3957201637099,35.325523126312,16.7765516133401,15.5550204958333,11.4345460422707,12.5153510538439,15.3429274398198,13.0906468072523,13.9527486238272,15.785101396799,14.3068016201607,13.1415834385511,23.5694878592851,11.4505989807179,14.7137346837423,11.7040384373477,14.0155480587215,20.342913246247,17.1672385181699,18.3655380137068,19.6614561761652,5.38919982332106,10.2117283290622,13.5482365606241,10.0830036916684,13.6243152120543,12.537077994798,12.1411460480687,9.95171334092466,10.5331978096985,15.4408744268829,18.4706274607135,12.6346721246656,9.38104239924385,13.5046546095761,9.94327889457883,14.1670246858131,12.8041703696524,16.0448421877781,10.7309360559848,14.1286064264275,18.1015834904828,18.879258369096,14.024904051433,16.0819986167866,13.8316572633362,16.3731830887654,13.24826675954,11.0107935245834,22.1380584599145,12.9580777665137,7.03851226766272,13.0052536241846,9.53619213783491,12.7060620512706,12.008414367623,12.7451169495415,12.3377556001573,9.38784041926862,11.8127548136127,15.1206918751275,13.062593836981,10.7858329038507,14.9135254413539,16.9270082266212,10.4317345524195,11.0821057231437,15.7790829942313,13.0336849821001,13.1887691273986,16.4819176742249,16.3150265780584,13.8753539100826,16.1708689676616,17.7691916047393,11.5616524563988,11.1786220829783,11.596980711679,10.3436571697033,12.7801876474757,14.470629585145,12.731292589071,17.2617682470486,9.24170792617702,11.5315793538994,15.81450271800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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74173 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_uc007mwj.2_5end | |||
|cluster_id=chr12:3235489..3235522,+ | |||
|description=CAGE_peak_1_at_1700012B15Rik_5end | |||
|id=chr12:3235489..3235522,+ | |||
|ontology_enrichment_celltype=CL:0002031!4.40e-11!25;CL:0000988!6.48e-11!32;CL:0002032!6.48e-11!32;CL:0000037!6.48e-11!32;CL:0000566!6.48e-11!32;CL:0000837!6.48e-11!32;CL:0000838!1.88e-08!12;CL:0000084!9.13e-08!11;CL:0000827!9.13e-08!11;CL:0000738!1.54e-07!17;CL:0002087!1.54e-07!17;CL:0000791!2.98e-07!9;CL:0000789!2.98e-07!9;CL:0002420!2.98e-07!9;CL:0002419!2.98e-07!9;CL:0000790!2.98e-07!9;CL:0000542!7.05e-07!13;CL:0000051!7.05e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.40e-11,25;CL:0000988,6.48e-11,32;CL:0002032,6.48e-11,32;CL:0000037,6.48e-11,32;CL:0000837,6.48e-11,32;CL:0000838,1.88e-08,12;CL:0000084,9.13e-08,11;CL:0000827,9.13e-08,11;CL:0000738,1.54e-07,17;CL:0002087,1.54e-07,17;CL:0000791,2.98e-07,9;CL:0000789,2.98e-07,9;CL:0002420,2.98e-07,9;CL:0002419,2.98e-07,9;CL:0000790,2.98e-07,9;CL:0000542,7.05e-07,13;CL:0000051,7.05e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.35e-09!48;UBERON:0002390!2.65e-09!45;UBERON:0003061!2.65e-09!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-09,48;UBERON:0002405,1.35e-09,48;UBERON:0002390,2.65e-09,45;UBERON:0003061,2.65e-09,45;UBERON:0007811,1.49e-07,36 | |||
|phase1_expression=23.2215828301951,16.7508195666893,22.7499619694768,26.0119221723874,20.0358291978539,12.4230661214798,13.0823078733494,46.8717664092922,37.3090113701917,29.9602593692152,30.4767983441399,32.6268130290926,46.7377992712192,58.2219880110523,14.9899392817048,17.2103977281352,11.8925519281785,20.8205029136437,23.8579114473985,21.6438722416995,15.818051968099,22.539045922601,17.2391860831697,15.1992801653736,13.9939661450974,18.3754228516806,15.0766698655676,19.39241094173,15.5819203954227,11.8454160987167,11.5299865540758,25.4012269383852,20.9122027778754,31.6963362030877,12.9983228888074,7.14808975041517,8.37094360675713,36.8307835048479,19.533383613095,25.6526634547161,35.2938892818609,32.1031377930469,30.1016418879315,11.330713617802,10.5432008468295,7.52541683862894,12.5182615095686,9.15705656797875,15.378032791413,8.74934545834275,8.25919887589639,7.18762821824858,49.1603035749168,44.247090662692,53.7750078627942,15.9500850342287,14.0401385569991,11.3447860301037,13.5552028775931,14.8117474196169,10.775133859605,6.43804610931351,8.89294796111139,21.5975932147536,34.6103226898441,32.6820852875206,16.4780060785123,19.5951335713993,13.7907184370275,12.8255641415106,12.8298226424343,12.2829923293636,13.0312439161452,11.3916443269907,12.8432931164437,6.43453150627015,18.7196997698961,18.7700386985226,15.6678663921368,13.58428763621,12.5338071735301,16.1483144872596,19.5428099300967,15.1945904708554,17.1134037510027,18.2669722993674,11.6744778255264,9.87917062874093,16.3568577599678,16.3234569830657,27.5371264266594,12.9063581547208,13.599426674155,9.17495425784289,7.14754059192436,8.06448396775204,11.3759980306719,10.5666799998396,9.61208217030615,9.18682893726885,23.5208511027056,17.9657068380045,10.1922095882658,7.11066703153331,10.3915699685383,12.1612735428047,11.1215377903252,9.59144589640104,19.4203412735379,18.1099409659086,8.67426633830679,11.8741536541735,13.8369298353635,12.6607018064203,19.0493705559842,12.6923257242972,11.8653584512499,17.6411215442292,10.6153266233985,12.2942805960031,13.0296495891632,19.3950101254089,11.1835056730873,22.5441213698891,17.3840766655168,12.0064815948038,31.631192869563,26.3957201637099,35.325523126312,16.7765516133401,15.5550204958333,11.4345460422707,12.5153510538439,15.3429274398198,13.0906468072523,13.9527486238272,15.785101396799,14.3068016201607,13.1415834385511,23.5694878592851,11.4505989807179,14.7137346837423,11.7040384373477,14.0155480587215,20.342913246247,17.1672385181699,18.3655380137068,19.6614561761652,5.38919982332106,10.2117283290622,13.5482365606241,10.0830036916684,13.6243152120543,12.537077994798,12.1411460480687,9.95171334092466,10.5331978096985,15.4408744268829,18.4706274607135,12.6346721246656,9.38104239924385,13.5046546095761,9.94327889457883,14.1670246858131,12.8041703696524,16.0448421877781,10.7309360559848,14.1286064264275,18.1015834904828,18.879258369096,14.024904051433,16.0819986167866,13.8316572633362,16.3731830887654,13.24826675954,11.0107935245834,22.1380584599145,12.9580777665137,7.03851226766272,13.0052536241846,9.53619213783491,12.7060620512706,12.008414367623,12.7451169495415,12.3377556001573,9.38784041926862,11.8127548136127,15.1206918751275,13.062593836981,10.7858329038507,14.9135254413539,16.9270082266212,10.4317345524195,11.0821057231437,15.7790829942313,13.0336849821001,13.1887691273986,16.4819176742249,16.3150265780584,13.8753539100826,16.1708689676616,17.7691916047393,11.5616524563988,11.1786220829783,11.596980711679,10.3436571697033,12.7801876474757,14.470629585145,12.731292589071,17.2617682470486,9.24170792617702,11.5315793538994,15.814502718009,8.55924179637558,10.9213185590096,11.1134706296729,8.61107584905178,16.8855232477179,19.2143317773269,11.5589761179996,8.47417877498535,7.63852885988347,11.0304416695596,12.0604505358107,16.1869675802489,13.2690880543303,14.029527825451,18.3815692408483,17.8589340896386,17.8611013040154,17.9592381140531,18.949026674178,31.6661696272472,13.5976420954677,10.3270497333998,17.1080782708934,14.4495530989013,15.2375192569864,6.72133276044369,13.8859009962405,14.8288863125641,11.7131623288992,18.5264122050207,14.0991590792006,16.4871018820972,16.9845918473299,14.9779959619711,16.0740721851222,10.2774822266096,18.6366363524648,18.7360912474915,14.2452482933804,16.4515828947112,21.2811458634571,6.63725691699814,7.76898035695941,8.76738315197778,10.5618844663303,8.56375489354241,12.912276213645,11.62927319257,10.5424781548477,12.83390562185,13.9056173491759,7.37930260024991,19.5957532171555,17.702859499197,7.92268813737765,9.70190128370659,9.85950361145325,11.5271151867478,13.1992925025532,16.29035303961,19.1812917942198,16.4270195644597,14.192748747876,10.5853631066382,13.5206727412014,11.3025098687134,11.1578911117088,13.8471919043638,11.8181447816444,6.70405924248657,12.9797711407357,17.2579589605831,13.4151464176095,15.7415348264255,16.3880557594081,14.3528939107076,18.0734756833153,42.1546506384761,39.0464551983006,36.0701931629546,19.0934123603023,9.17374381385292,13.0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| |||
|short_description=p1@1700012B15Rik | |||
}} |
Revision as of 23:26, 4 August 2015
Short description: | p1@1700012B15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1700012B15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -3bp_to_uc007mwj.2_5end |
EntrezGene: | 74173 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.40e-11 | 25 |
hematopoietic cell | 6.48e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.48e-11 | 32 |
hematopoietic stem cell | 6.48e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.48e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.88e-08 | 12 |
T cell | 9.13e-08 | 11 |
pro-T cell | 9.13e-08 | 11 |
leukocyte | 1.54e-07 | 17 |
nongranular leukocyte | 1.54e-07 | 17 |
mature alpha-beta T cell | 2.98e-07 | 9 |
alpha-beta T cell | 2.98e-07 | 9 |
immature T cell | 2.98e-07 | 9 |
mature T cell | 2.98e-07 | 9 |
immature alpha-beta T cell | 2.98e-07 | 9 |
lymphocyte | 7.05e-07 | 13 |
common lymphoid progenitor | 7.05e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.35e-09 | 48 |
immune system | 1.35e-09 | 48 |
hematopoietic system | 2.65e-09 | 45 |
blood island | 2.65e-09 | 45 |
craniocervical region | 1.49e-07 | 36 |