FFCP PHASE1:Mm9::chr1:154472254..154472268,-: Difference between revisions
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{{FFCP|EntrezGene=19731|HGNC=|MCL_coexpression_id=3238|UniProt=Q60695|association_with_transcript=-13bp_to_NM_016846,uc007czh.1_5end|description=CAGE_peak_3_at_Rgl1_5end|id=chr1:154472254..154472268,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.45e-09!33;UBERON:0009569!2.38e-08!66;UBERON:0000926!5.34e-08!193;UBERON:0004120!5.34e-08!193;UBERON:0006603!5.34e-08!193;UBERON:0003914!2.20e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.77e-09,33;UBERON:0009569,3.39e-09,66;UBERON:0003914,9.58e-08,47;UBERON:0007100,4.99e-07,18;UBERON:0000948,4.99e-07,18;UBERON:0005498,4.99e-07,18;UBERON:0004140,4.99e-07,18;UBERON:0009881,4.99e-07,18;UBERON:0004141,4.99e-07,18;UBERON:0003084,4.99e-07,18;UBERON:0007005,4.99e-07,18;UBERON:0004139,4.99e-07,18;UBERON:0004291,4.99e-07,18;UBERON:0005177,5.12e-07,79;UBERON:0004535,7.08e-07,23;UBERON:0001009,7.08e-07,23|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.936258105287974,0,0.0797721589953364,0.171200729931206,0,1.33243904726265,0.202475267389826,1.39912375625629,0.946386496074713,1.91960207048034,0,1.78590909317247,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,2.01434908760924,1.92616169317078,0.917733760808408,0.782391344348039,3.05235218932625,6.81027166476863,8.55491555926847,1.39986421625363,1.43752564364972,1.17447824240415,0.725362142011344,0.336093799142464,2.57259436035947,2.29226751951005,0,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,1.49800055259202,1.15265491596466,0.414758449233911,0.675029691658453,0.630974884054146,0.856952953211411,0.220868540951614,1.10241719293459,0.191690942036473,0,0,1.0214987046815,0.921639199537461,0,0.274462930807229,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,1.42371680799103,0.745597783301202,0.37863096666592,1.13357340160178,12.1743085254705,5.16254326188832,0.679971333707751,0,1.29955283489534,1.34408066129201,2.66844398250329,1.53387290320252,2.33807404142582,1.06001872353102,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,1.1418387971906,5.43769555659061,1.63286352971307,2.08182392119363,1.21786191324856,1.15307748628029,1.95939432718409,2.23418543557839,1.50799909595611,18.0452326446093,1.87979163995885,3.5384422077995,1.45590164952668,2.20841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0.718890747035522,0,1.14363204365758,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,1.0389402227978,1.78465389374533,3.86989582631202,2.86136032403214,0,0.631325567659422,1.30120442962704,1.37941262660084,0.900310649026746,2.41127708537144,1.7009124787832,2.562274405697,2.06143794031403,1.03481348295606,1.29340795759705,1.51284864134255,1.58356011747554,2.19195732427575,1.94633074457919,2.78601733217733,1.23469281844766,2.58744546864041,0,0.51469581422943,0.852490498186778,3.52113813310353,2.11073453982987,4.32148947506436,1.89395788468168,4.13204886669548,3.5481435964097,3.48800917125612,5.36546802799238,4.78737903705395,3.62031669809657,2.62667942526552,3.32382119138008,3.65499968563331,3.07370161407471,3.62357330653004,0.630869845692382,0.720332286654991,0,0.528901133327089,1.06644125267617,3.25131340604614,1.80414445850931,3.42861991859682,3.7804267453628,2.28270751335071,1.42358718463353,3.95277491337626,3.51869292320377,3.18330355265841,2.53453313254856,0,1.29682829924817,0.995706366271836,1.51734320762465,2.97046132785295,4.50830942692322,1.62921062276251,3.29719228184964,4.76923575254166,6.00747102680444,5.16635517928608,6.90794402502049,9.87177311374404,2.66807364378434,1.00107063429656,1.96558995113203,0.899448449539415,2.43432145666204,2.17059443777175,2.80088436959562,1.15078454980324,2.10775794807546,3.56929837144506,0,5.20997326735905,5.30464044294753,4.54641980304801,2.33216637578486,2.8946611281802,2.03228509183265,1.70542270593436,4.07412441105065,2.8856664581782,2.58159273117352,1.67506257441816,2.38043640886014,3.31727201358258,3.15270288212382,3.76489972402917,8.13219320153184,3.76885623846197,3.62638461918381,3.90552458170081,0,0.54390568381871,0.983528546038072,1.65562047782839,0.321101179975584,1.17211686592203,1.80328439914343,2.7771801992481,1.89304931649754,1.56175497718655,1.29254038639679,2.15071918157297,3.34198011123591,4.24614796183249,4.85772842009873,2.04579100537918,1.58115111178609,0.963963949265421,1.27746076687442,2.31485284767432,4.72372182125371,1.48473110675282,0,0.971122544619926,0.604647113929502,0.754420319023592,1.18120757152309,1.53717573971964,1.80899805217755,2.18120237686503,1.42598951353889,1.26414703174326,0,1.03135543248187,1.02131881726136,1.44048875225048,1.4229455216103,2.7863814554107,0.532020700926821,1.96205699362278,2.63278432963394,1.522324745573,6.33613611772018,5.08396970073168,0.661585194164886,2.4732937941222,2.58343082713449,2.5934557719107,1.67121281604391,2.1338316966858,1.45740418314925,0.370850604021019,2.05045056957423,2.06386867963222,2.03713980106683,1.88368457004691,3.00727300986255,1.83022538565218,0.849892149969277,0.69975726161829,1.10559979043539,2.86401185404534,1.58167996790568,2.03319467126849,1.72808545314882,1.46361807210128,1.9652630737156,2.42755823492677,3.05817786183743,2.87931536182433,1.03691978633434,1.24267862617385,0.56369293868419,1.79419855252775,1.98550188548517,2.91676782516071,1.6790777052105,1.35164900392623,1.87771581833206,3.1249052362548,2.09718688851422,1.69108884578204,2.59227005632079,0.632022241256357,1.41907650703115,0.924398614483445,0.389762468933385,1.07416017400489,1.39076948346885,0.841368146639782,0.295379054349154,0.403865799792591,0.533447646584999,0.907435666231565,0.38983152295901,0.769694733122636,0.818138315270983,0.906921534460845,0.221985953374065,0,0,2.70465431645067,4.69206188627955,2.01466786693992,0.857473516316263,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.518936737920883,1.19707462020309,1.36586884603307,1.70174701947806,2.93458427679175,2.75765262675021,1.55572709461131,1.85431551515005,0.962757628775446,2.02157769411038,2.5347929989024,1.69763707247469,2.71560371662659,2.62503124859964,2.23998328926892,4.28664322154766,2.43357084484197,1.92909220463705,2.88460130562315,2.94397840268795,1.02860775715625,1.06485483695602,1.90748951957857,1.45346416632329,2.4468438907986,2.19997980518359,1.82927972872773,1.31534855718921,1.7654534799962,0.561142271657738,2.72860541685601,2.36410757701352,2.45538625901814,1.54936841185966,0.771626443924566,0.749431733813838,1.63752125911786,1.93383948643468,1.53030665655075,3.52946270591225,1.15933917810211|short_description=p3@Rgl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19731 | |||
|HGNC= | |||
|MCL_coexpression_id=3238 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q60695 | |||
|association_with_transcript=-13bp_to_NM_016846,uc007czh.1_5end | |||
|cluster_id=chr1:154472254..154472268,- | |||
|description=CAGE_peak_3_at_Rgl1_5end | |||
|id=chr1:154472254..154472268,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.45e-09!33;UBERON:0009569!2.38e-08!66;UBERON:0000926!5.34e-08!193;UBERON:0004120!5.34e-08!193;UBERON:0006603!5.34e-08!193;UBERON:0003914!2.20e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.77e-09,33;UBERON:0009569,3.39e-09,66;UBERON:0003914,9.58e-08,47;UBERON:0007100,4.99e-07,18;UBERON:0000948,4.99e-07,18;UBERON:0005498,4.99e-07,18;UBERON:0004140,4.99e-07,18;UBERON:0009881,4.99e-07,18;UBERON:0004141,4.99e-07,18;UBERON:0003084,4.99e-07,18;UBERON:0007005,4.99e-07,18;UBERON:0004139,4.99e-07,18;UBERON:0004291,4.99e-07,18;UBERON:0005177,5.12e-07,79;UBERON:0004535,7.08e-07,23;UBERON:0001009,7.08e-07,23 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.936258105287974,0,0.0797721589953364,0.171200729931206,0,1.33243904726265,0.202475267389826,1.39912375625629,0.946386496074713,1.91960207048034,0,1.78590909317247,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,2.01434908760924,1.92616169317078,0.917733760808408,0.782391344348039,3.05235218932625,6.81027166476863,8.55491555926847,1.39986421625363,1.43752564364972,1.17447824240415,0.725362142011344,0.336093799142464,2.57259436035947,2.29226751951005,0,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,1.49800055259202,1.15265491596466,0.414758449233911,0.675029691658453,0.630974884054146,0.856952953211411,0.220868540951614,1.10241719293459,0.191690942036473,0,0,1.0214987046815,0.921639199537461,0,0.274462930807229,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,1.42371680799103,0.745597783301202,0.37863096666592,1.13357340160178,12.1743085254705,5.16254326188832,0.679971333707751,0,1.29955283489534,1.34408066129201,2.66844398250329,1.53387290320252,2.33807404142582,1.06001872353102,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,1.1418387971906,5.43769555659061,1.63286352971307,2.08182392119363,1.21786191324856,1.15307748628029,1.95939432718409,2.23418543557839,1.50799909595611,18.0452326446093,1.87979163995885,3.5384422077995,1.45590164952668,2.20841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0.718890747035522,0,1.14363204365758,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,1.0389402227978,1.78465389374533,3.86989582631202,2.86136032403214,0,0.631325567659422,1.30120442962704,1.37941262660084,0.900310649026746,2.41127708537144,1.7009124787832,2.562274405697,2.06143794031403,1.03481348295606,1.29340795759705,1.51284864134255,1.58356011747554,2.19195732427575,1.94633074457919,2.78601733217733,1.23469281844766,2.58744546864041,0,0.51469581422943,0.852490498186778,3.52113813310353,2.11073453982987,4.32148947506436,1.89395788468168,4.13204886669548,3.5481435964097,3.48800917125612,5.36546802799238,4.78737903705395,3.62031669809657,2.62667942526552,3.32382119138008,3.65499968563331,3.07370161407471,3.62357330653004,0.630869845692382,0.720332286654991,0,0.528901133327089,1.06644125267617,3.25131340604614,1.80414445850931,3.42861991859682,3.7804267453628,2.28270751335071,1.42358718463353,3.95277491337626,3.51869292320377,3.18330355265841,2.53453313254856,0,1.29682829924817,0.995706366271836,1.51734320762465,2.97046132785295,4.50830942692322,1.62921062276251,3.29719228184964,4.76923575254166,6.00747102680444,5.16635517928608,6.90794402502049,9.87177311374404,2.66807364378434,1.00107063429656,1.96558995113203,0.899448449539415,2.43432145666204,2.17059443777175,2.80088436959562,1.15078454980324,2.10775794807546,3.56929837144506,0,5.20997326735905,5.30464044294753,4.54641980304801,2.33216637578486,2.8946611281802,2.03228509183265,1.70542270593436,4.07412441105065,2.8856664581782,2.58159273117352,1.67506257441816,2.38043640886014,3.31727201358258,3.15270288212382,3.76489972402917,8.13219320153184,3.76885623846197,3.62638461918381,3.90552458170081,0,0.54390568381871,0.983528546038072,1.65562047782839,0.321101179975584,1.17211686592203,1.80328439914343,2.7771801992481,1.89304931649754,1.56175497718655,1.29254038639679,2.15071918157297,3.34198011123591,4.24614796183249,4.85772842009873,2.04579100537918,1.58115111178609,0.963963949265421,1.27746076687442,2.31485284767432,4.72372182125371,1.48473110675282,0,0.971122544619926,0.604647113929502,0.754420319023592,1.18120757152309,1.53717573971964,1.80899805217755,2.18120237686503,1.42598951353889,1.26414703174326,0,1.03135543248187,1.02131881726136,1.44048875225048,1.4229455216103,2.7863814554107,0.532020700926821,1.96205699362278,2.63278432963394,1.522324745573,6.33613611772018,5.08396970073168,0.661585194164886,2.4732937941222,2.58343082713449,2.5934557719107,1.67121281604391,2.1338316966858,1.45740418314925,0.370850604021019,2.05045056957423,2.06386867963222,2.03713980106683,1.88368457004691,3.00727300986255,1.83022538565218,0.849892149969277,0.69975726161829,1.10559979043539,2.86401185404534,1.58167996790568,2.03319467126849,1.72808545314882,1.46361807210128,1.9652630737156,2.42755823492677,3.05817786183743,2.87931536182433,1.03691978633434,1.24267862617385,0.56369293868419,1.79419855252775,1.98550188548517,2.91676782516071,1.6790777052105,1.35164900392623,1.87771581833206,3.1249052362548,2.09718688851422,1.69108884578204,2.59227005632079,0.632022241256357,1.41907650703115,0.924398614483445,0.389762468933385,1.07416017400489,1.39076948346885,0.841368146639782,0.295379054349154,0.403865799792591,0.533447646584999,0.907435666231565,0.38983152295901,0.769694733122636,0.818138315270983,0.906921534460845,0.221985953374065,0,0,2.70465431645067,4.6920618862795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| |||
|short_description=p3@Rgl1 | |||
}} |
Revision as of 00:15, 5 August 2015
Short description: | p3@Rgl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rgl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3238 |
Association with transcript: | -13bp_to_NM_016846, uc007czh.1_5end |
EntrezGene: | 19731 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.77e-09 | 33 |
subdivision of trunk | 3.39e-09 | 66 |
epithelial tube | 9.58e-08 | 47 |
primary circulatory organ | 4.99e-07 | 18 |
heart | 4.99e-07 | 18 |
primitive heart tube | 4.99e-07 | 18 |
primary heart field | 4.99e-07 | 18 |
anterior lateral plate mesoderm | 4.99e-07 | 18 |
heart tube | 4.99e-07 | 18 |
heart primordium | 4.99e-07 | 18 |
cardiac mesoderm | 4.99e-07 | 18 |
cardiogenic plate | 4.99e-07 | 18 |
heart rudiment | 4.99e-07 | 18 |
trunk region element | 5.12e-07 | 79 |
cardiovascular system | 7.08e-07 | 23 |
circulatory system | 7.08e-07 | 23 |