FFCP PHASE1:Mm9::chr15:25840219..25840245,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:25840219..25840245,+
|short_description=p@chr15:25840219..25840245,+
|description=CAGE_peak_at_chr15:25840219..25840245,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2964 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:25840219..25840245,+ | |||
|description=CAGE_peak_at_chr15:25840219..25840245,+ | |||
|id=chr15:25840219..25840245,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.67e-14!32;CL:0002032!1.67e-14!32;CL:0000037!1.67e-14!32;CL:0000566!1.67e-14!32;CL:0000837!1.67e-14!32;CL:0002031!2.42e-09!25;CL:0000838!4.60e-09!12;CL:0000542!3.85e-08!13;CL:0000051!3.85e-08!13;CL:0000084!6.03e-08!11;CL:0000827!6.03e-08!11;CL:0002320!7.09e-08!46;CL:0000134!7.09e-08!46;CL:0000049!1.07e-07!19;CL:0000553!1.35e-07!6;CL:0000556!1.35e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.26e-25,32;CL:0002032,8.26e-25,32;CL:0000037,8.26e-25,32;CL:0000837,8.26e-25,32;CL:0002320,1.91e-16,46;CL:0000134,1.91e-16,46;CL:0000049,1.40e-15,19;CL:0000219,1.31e-13,54;CL:0002031,3.61e-11,25;CL:0000838,5.25e-11,12;CL:0000034,3.94e-10,97;CL:0000542,4.03e-10,13;CL:0000051,4.03e-10,13;CL:0000084,2.21e-08,11;CL:0000827,2.21e-08,11;CL:0000763,2.82e-08,16;CL:0000738,1.28e-07,17;CL:0002087,1.28e-07,17;CL:0000723,5.76e-07,91;CL:0000048,5.76e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.92e-11!48;UBERON:0002405!3.92e-11!70;UBERON:0003081!4.38e-10!88;UBERON:0002390!1.78e-09!45;UBERON:0003061!1.78e-09!45;UBERON:0002384!7.09e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.91e-16,46;UBERON:0002371,2.82e-08,16;UBERON:0001474,7.48e-08,22;UBERON:0004765,7.48e-08,22;UBERON:0001434,7.48e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.422366166455,0.468129052643987,0,0,1.02720437958723,0.961624426608971,0.666219523631325,0.404950534779652,0.699561878128147,6.30924330716475,5.07323404341233,1.69755860719212,0.17008658030214,2.58156473122302,5.74639536105658,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,8.38913030288682,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,1.76922110389975,0.323533699894818,0.662524555381181,0,0,0,0,0,8.74650408893218,5.39912457894067,8.13249453267614,0,0,0,0,0,0,0.162241263067758,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,1.54408744268829,2.27330799516474,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.624075346229121,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.301564624640779,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,1.0935538217682,1.14389086603261,17.1678214293794,13.9951452323658,16.8603968041397,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.443068581523732,0.100966449948148,0.304827226619999,0.302478555410522,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.422366166455,0.468129052643987,0,0,1.02720437958723,0.961624426608971,0.666219523631325,0.404950534779652,0.699561878128147,6.30924330716475,5.07323404341233,1.69755860719212,0.17008658030214,2.58156473122302,5.74639536105658,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,8.38913030288682,1.45072428402269,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0,0,0,0,0.117588707135705,0,0,0.289198713839823,1.76922110389975,0.323533699894818,0.662524555381181,0,0,0,0,0,8.74650408893218,5.39912457894067,8.13249453267614,0,0,0,0,0,0,0.162241263067758,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,1.54408744268829,2.27330799516474,0.828503090142008,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.624075346229121,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.301564624640779,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,1.0935538217682,1.14389086603261,17.1678214293794,13.9951452323658,16.8603968041397,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.443068581523732,0.100966449948148,0.304827226619999,0.302478555410522,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr15:25840219..25840245,+ | |||
}} | }} |
Latest revision as of 03:16, 5 August 2015
Short description: | p@chr15:25840219..25840245, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25840219..25840245, + |
Coexpression cluster: | MCL_coexpression_mm9:2964 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.26e-25 | 32 |
hematopoietic oligopotent progenitor cell | 8.26e-25 | 32 |
hematopoietic stem cell | 8.26e-25 | 32 |
hematopoietic multipotent progenitor cell | 8.26e-25 | 32 |
connective tissue cell | 1.91e-16 | 46 |
mesenchymal cell | 1.91e-16 | 46 |
common myeloid progenitor | 1.40e-15 | 19 |
motile cell | 1.31e-13 | 54 |
hematopoietic lineage restricted progenitor cell | 3.61e-11 | 25 |
lymphoid lineage restricted progenitor cell | 5.25e-11 | 12 |
stem cell | 3.94e-10 | 97 |
lymphocyte | 4.03e-10 | 13 |
common lymphoid progenitor | 4.03e-10 | 13 |
T cell | 2.21e-08 | 11 |
pro-T cell | 2.21e-08 | 11 |
myeloid cell | 2.82e-08 | 16 |
leukocyte | 1.28e-07 | 17 |
nongranular leukocyte | 1.28e-07 | 17 |
somatic stem cell | 5.76e-07 | 91 |
multi fate stem cell | 5.76e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.91e-16 | 46 |
bone marrow | 2.82e-08 | 16 |
bone element | 7.48e-08 | 22 |
skeletal element | 7.48e-08 | 22 |
skeletal system | 7.48e-08 | 22 |