Personal tools

FFCP PHASE1:Mm9::chr4:147588847..147588858,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:147588847..147588858,-
|description=CAGE_peak_at_chr4:147588847..147588858,-
|description=CAGE_peak_at_chr4:147588847..147588858,-
|id=chr4:147588847..147588858,-
|id=chr4:147588847..147588858,-
|ontology_enrichment_celltype=CL:0002610!2.14e-15!3;CL:0002614!1.22e-07!3
|ontology_enrichment_celltype=CL:0002610!2.14e-15!3;CL:0002614!1.22e-07!3
|ontology_enrichment_celltype_v019_2=CL:0002610,2.10e-37,3;CL:0002614,8.93e-18,3;CL:0000117,7.59e-14,23;CL:0000337,7.59e-14,23;CL:0000540,9.52e-10,33;CL:0000047,9.52e-10,33;CL:0000031,9.52e-10,33;CL:0000404,9.52e-10,33;CL:0000393,2.74e-08,39;CL:0000211,2.74e-08,39;CL:0002319,1.54e-07,43;CL:0000221,2.26e-07,44;CL:0000133,2.26e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004684!2.14e-15!3;UBERON:0002275!2.14e-15!3;UBERON:0001301!7.91e-15!3;UBERON:0006555!7.91e-15!3;UBERON:0005103!7.91e-15!3;UBERON:0000083!7.91e-15!3;UBERON:0009201!7.91e-15!3;UBERON:0004819!7.91e-15!3;UBERON:0006553!7.91e-15!3;UBERON:0003074!7.91e-15!3;UBERON:0003060!7.91e-15!3;UBERON:0002616!1.91e-14!49;UBERON:0000955!4.09e-14!50;UBERON:0006238!4.09e-14!50;UBERON:0000080!2.94e-11!4;UBERON:0005904!2.94e-11!4;UBERON:0006947!2.94e-11!4;UBERON:0002120!2.94e-11!4;UBERON:0004054!2.94e-11!4;UBERON:0004875!2.94e-11!4;UBERON:0004876!2.94e-11!4;UBERON:0005721!2.94e-11!4;UBERON:0005754!2.94e-11!4;UBERON:0007297!2.94e-11!4;UBERON:0000033!8.90e-11!63;UBERON:0001343!4.69e-10!2;UBERON:0004910!4.69e-10!2;UBERON:0004909!4.69e-10!2;UBERON:0005154!4.69e-10!2;UBERON:0005295!4.69e-10!2;UBERON:0005297!4.69e-10!2;UBERON:0005294!4.69e-10!2;UBERON:0010141!4.69e-10!2;UBERON:0005891!4.69e-10!2;UBERON:0001017!5.16e-09!73;UBERON:0005743!5.16e-09!73;UBERON:0000073!1.02e-08!75;UBERON:0001016!1.02e-08!75;UBERON:0003064!3.72e-08!14;UBERON:0004121!4.07e-08!102;UBERON:0000924!4.07e-08!102;UBERON:0006601!4.07e-08!102;UBERON:0002298!8.85e-08!6;UBERON:0001894!1.00e-07!10;UBERON:0006222!1.00e-07!10;UBERON:0000058!1.15e-07!6;UBERON:0002038!1.22e-07!3;UBERON:0002308!1.22e-07!3;UBERON:0009663!1.22e-07!3;UBERON:0009661!1.22e-07!3;UBERON:0006331!1.22e-07!3;UBERON:0000125!1.22e-07!3;UBERON:0002346!1.23e-07!71;UBERON:0003075!1.23e-07!71;UBERON:0007284!1.23e-07!71;UBERON:0001049!1.26e-07!52;UBERON:0005068!1.26e-07!52;UBERON:0006241!1.26e-07!52;UBERON:0007135!1.26e-07!52;UBERON:0007811!2.48e-07!86;UBERON:0004871!5.52e-07!3;UBERON:0002780!7.78e-07!39;UBERON:0001890!7.78e-07!39;UBERON:0006240!7.78e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.10e-37,3;UBERON:0002275,2.10e-37,3;UBERON:0002038,8.93e-18,3;UBERON:0009663,8.93e-18,3;UBERON:0009661,8.93e-18,3;UBERON:0000125,8.93e-18,3;UBERON:0002308,8.93e-18,3;UBERON:0002950,1.35e-13,4;UBERON:0001891,1.35e-13,4;UBERON:0009616,1.35e-13,4;UBERON:0010286,1.35e-13,4;UBERON:0000073,1.70e-08,54;UBERON:0002420,2.84e-07,8;UBERON:0007245,2.84e-07,8;UBERON:0010009,2.84e-07,8;UBERON:0010011,2.84e-07,8;UBERON:0000454,2.84e-07,8
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,1.14918604276669,1.99688493233117,0,0,0,4.18774498502071,0,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.870848794270651,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38307724027652,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,1.14918604276669,1.99688493233117,0,0,0,4.18774498502071,0,2.90316670775939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.870848794270651,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38307724027652,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr4:147588847..147588858,-
|short_description=p@chr4:147588847..147588858,-
}}
}}

Latest revision as of 04:18, 5 August 2015

Short description:p@chr4:147588847..147588858, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:147588847..147588858, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:147588847..147588858,-&oldid=3857772"