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FFCP PHASE1:Mm9::chr12:72116953..72117050,+: Difference between revisions

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{{FFCP|EntrezGene=238247|HGNC=|MCL_coexpression_id=317|UniProt=F8VPQ2,B2RY61,Q8BWM4|association_with_transcript=0bp_to_ENSMUST00000046305,ENSMUST00000134718,NM_001081195,uc007nud.1,uc011ynm.1_5end|description=CAGE_peak_1_at_Arid4a_5end|id=chr12:72116953..72117050,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!4.44e-12!126;UBERON:0004185!4.44e-12!126;UBERON:0001007!1.20e-11!128;UBERON:0001555!1.20e-11!128;UBERON:0007026!1.20e-11!128;UBERON:0004119!2.55e-11!130;UBERON:0000925!2.55e-11!130;UBERON:0006595!2.55e-11!130;UBERON:0005911!6.21e-11!69;UBERON:0001041!5.13e-10!92;UBERON:0000077!6.97e-10!97;UBERON:0003104!2.11e-08!131;UBERON:0009142!2.11e-08!131;UBERON:0003929!4.67e-08!55;UBERON:0001048!4.98e-08!147;UBERON:0004177!5.46e-08!29;UBERON:0000926!7.67e-08!193;UBERON:0004120!7.67e-08!193;UBERON:0006603!7.67e-08!193;UBERON:0005057!1.24e-07!51;UBERON:0002405!2.05e-07!70;UBERON:0002390!4.73e-07!45;UBERON:0003061!4.73e-07!45;UBERON:0001004!5.15e-07!42;UBERON:0002193!5.80e-07!48;UBERON:0000490!7.03e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005911,6.21e-11,69;UBERON:0004921,1.59e-10,114;UBERON:0001007,4.19e-10,116;UBERON:0001555,4.19e-10,116;UBERON:0007026,4.19e-10,116;UBERON:0004119,8.70e-10,118;UBERON:0000925,8.70e-10,118;UBERON:0006595,8.70e-10,118;UBERON:0001041,1.06e-08,80;UBERON:0003929,4.67e-08,55;UBERON:0004177,5.46e-08,29;UBERON:0005057,5.46e-08,29;UBERON:0000077,9.57e-08,35;UBERON:0002390,4.78e-07,45;UBERON:0003061,4.78e-07,45;UBERON:0001004,5.15e-07,42;UBERON:0002193,5.86e-07,48;UBERON:0002405,5.86e-07,48;UBERON:0000490,7.03e-07,66|phase1_expression=14.733693933641,33.5016391333787,30.0299497997094,40.5302043151152,36.064492556137,19.3061162698673,15.6520469199002,33.830310741693,41.39188431259,37.9184532641629,5.65019295144166,7.09972215058494,35.4385510957596,35.5801037845319,15.6561588053361,25.3094084237282,18.88817070946,26.1833597247337,33.1816929325888,27.585327366872,12.5864069423583,10.6241317784947,9.40319240900167,9.91953021319121,6.42345986988076,20.6723507081407,13.3536218809313,13.574687659211,6.27077284206034,14.617747526076,5.98672378769323,3.81018404075779,8.61090702618398,0,10.1098066912946,7.48055904113216,13.4751775133164,41.4346314429539,38.2854318816662,48.6877081895632,66.4701581475046,66.2554120409692,48.0655249500842,4.90997590104751,5.87986201073184,5.68994931701213,2.34717403304412,1.74420125104357,1.97717564461025,1.74986909166855,0.979904951377538,0,34.395434241836,64.5572306390096,45.0365690850902,4.3734104126111,8.02293631828519,6.18806510732931,2.22548106945558,0,2.53532561402472,1.69422266034566,0.889294796111139,1.7997994345628,4.94433181283487,4.2628806896766,0.898800331555214,1.92109152660777,4.14758449233911,1.4850653216486,2.10324961351382,2.85650984403804,1.32521124570968,2.44981598429908,3.25874601462004,2.75765635983006,4.40463523997555,6.89511625660014,7.0659005297872,1.97829431595291,2.74462930807229,2.08365348222704,3.35019598801657,5.6276261003168,6.57032465440283,7.36571463684169,3.13217697758026,3.35519002485541,8.5570598466498,8.31287161174641,20.0006497204158,12.9063581547208,1.3599426674155,10.7940638327563,12.3457519315057,9.40856462904405,7.5839986871146,5.45377032249785,7.01422212427746,5.3000936176551,8.87313544593087,12.8326477414318,35.6727335589304,21.3320010945999,3.030874574157,4.56047757855178,1.51657333504435,11.3042040921869,57.4842101696721,10.0940654564081,5.03107447621794,7.61163695780353,5.76538743140146,9.3448037142626,9.8774513993992,8.67099480174761,13.5957232253906,14.1707369781513,14.153768831198,11.4854463462661,17.2256384399107,14.0613823409214,9.31958806090611,12.296793474485,13.823482649688,14.0501380364725,16.7741174308288,15.5974710058286,14.1047952051102,6.74057877321702,8.6925114535539,5.90575454930463,6.95297280769106,7.41574826257959,6.64921742590592,5.84068547043927,11.3041693873851,17.0437549735827,11.3725241295154,14.9413717679397,8.06746746368763,5.28774840196988,7.56260945182467,11.1521565198429,13.1310443362063,13.4519406299092,12.1812241927647,19.9201595469042,7.11374376678379,9.8335161687266,8.09375171154165,5.47989331068937,11.1218899690239,12.1888258282758,11.3180175024369,9.15557627365069,11.937624184325,14.9261786126535,15.6289924667576,6.62802472113606,7.73935997937617,7.92273070428465,11.6004920436753,11.0187969778546,12.0328348052155,9.06882384526591,9.12129564758705,9.22446204700639,11.8483091937706,11.1633875573785,17.1865876237214,13.0117988808546,12.0752563410078,10.468100663309,8.20130799400096,6.27718135513635,15.8601015832223,7.66906643324278,6.39864751605702,10.6828869055802,11.3403365963442,12.5043785266472,11.1189021922435,7.22857379227725,17.0830462156024,7.74085087202851,10.304743560811,10.1467800740987,12.8676297498619,12.5834717211591,15.561939590978,12.1476176685164,1.51734320762465,8.56863844572966,5.63538678365402,7.73875045812194,9.30971938404604,10.73078044321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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:238247
|HGNC=
|MCL_coexpression_id=317
|TSSclassifier=NA
|UniProt=uniprot:F8VPQ2,uniprot:B2RY61,uniprot:Q8BWM4
|association_with_transcript=0bp_to_ENSMUST00000046305,ENSMUST00000134718,NM_001081195,uc007nud.1,uc011ynm.1_5end
|cluster_id=chr12:72116953..72117050,+
|description=CAGE_peak_1_at_Arid4a_5end
|id=chr12:72116953..72117050,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0005911,6.21e-11,69;UBERON:0004921,1.59e-10,114;UBERON:0001007,4.19e-10,116;UBERON:0001555,4.19e-10,116;UBERON:0007026,4.19e-10,116;UBERON:0004119,8.70e-10,118;UBERON:0000925,8.70e-10,118;UBERON:0006595,8.70e-10,118;UBERON:0001041,1.06e-08,80;UBERON:0003929,4.67e-08,55;UBERON:0004177,5.46e-08,29;UBERON:0005057,5.46e-08,29;UBERON:0000077,9.57e-08,35;UBERON:0002390,4.78e-07,45;UBERON:0003061,4.78e-07,45;UBERON:0001004,5.15e-07,42;UBERON:0002193,5.86e-07,48;UBERON:0002405,5.86e-07,48;UBERON:0000490,7.03e-07,66
|phase1_expression=14.733693933641,33.5016391333787,30.0299497997094,40.5302043151152,36.064492556137,19.3061162698673,15.6520469199002,33.830310741693,41.39188431259,37.9184532641629,5.65019295144166,7.09972215058494,35.4385510957596,35.5801037845319,15.6561588053361,25.3094084237282,18.88817070946,26.1833597247337,33.1816929325888,27.585327366872,12.5864069423583,10.6241317784947,9.40319240900167,9.91953021319121,6.42345986988076,20.6723507081407,13.3536218809313,13.574687659211,6.27077284206034,14.617747526076,5.98672378769323,3.81018404075779,8.61090702618398,0,10.1098066912946,7.48055904113216,13.4751775133164,41.4346314429539,38.2854318816662,48.6877081895632,66.4701581475046,66.2554120409692,48.0655249500842,4.90997590104751,5.87986201073184,5.68994931701213,2.34717403304412,1.74420125104357,1.97717564461025,1.74986909166855,0.979904951377538,0,34.395434241836,64.5572306390096,45.0365690850902,4.3734104126111,8.02293631828519,6.18806510732931,2.22548106945558,0,2.53532561402472,1.69422266034566,0.889294796111139,1.7997994345628,4.94433181283487,4.2628806896766,0.898800331555214,1.92109152660777,4.14758449233911,1.4850653216486,2.10324961351382,2.85650984403804,1.32521124570968,2.44981598429908,3.25874601462004,2.75765635983006,4.40463523997555,6.89511625660014,7.0659005297872,1.97829431595291,2.74462930807229,2.08365348222704,3.35019598801657,5.6276261003168,6.57032465440283,7.36571463684169,3.13217697758026,3.35519002485541,8.5570598466498,8.31287161174641,20.0006497204158,12.9063581547208,1.3599426674155,10.7940638327563,12.3457519315057,9.40856462904405,7.5839986871146,5.45377032249785,7.01422212427746,5.3000936176551,8.87313544593087,12.8326477414318,35.6727335589304,21.3320010945999,3.030874574157,4.56047757855178,1.51657333504435,11.3042040921869,57.4842101696721,10.0940654564081,5.03107447621794,7.61163695780353,5.76538743140146,9.3448037142626,9.8774513993992,8.67099480174761,13.5957232253906,14.1707369781513,14.153768831198,11.4854463462661,17.2256384399107,14.0613823409214,9.31958806090611,12.296793474485,13.823482649688,14.0501380364725,16.7741174308288,15.5974710058286,14.1047952051102,6.74057877321702,8.6925114535539,5.90575454930463,6.95297280769106,7.41574826257959,6.64921742590592,5.84068547043927,11.3041693873851,17.0437549735827,11.3725241295154,14.9413717679397,8.06746746368763,5.28774840196988,7.56260945182467,11.1521565198429,13.1310443362063,13.4519406299092,12.1812241927647,19.9201595469042,7.11374376678379,9.8335161687266,8.09375171154165,5.47989331068937,11.1218899690239,12.1888258282758,11.3180175024369,9.15557627365069,11.937624184325,14.9261786126535,15.6289924667576,6.62802472113606,7.73935997937617,7.92273070428465,11.6004920436753,11.0187969778546,12.0328348052155,9.06882384526591,9.12129564758705,9.22446204700639,11.8483091937706,11.1633875573785,17.1865876237214,13.0117988808546,12.0752563410078,10.468100663309,8.20130799400096,6.27718135513635,15.8601015832223,7.66906643324278,6.39864751605702,10.6828869055802,11.3403365963442,12.5043785266472,11.1189021922435,7.22857379227725,17.0830462156024,7.74085087202851,10.304743560811,10.1467800740987,12.8676297498619,12.5834717211591,15.561939590978,12.1476176685164,1.51734320762465,8.56863844572966,5.63538678365402,7.73875045812194,9.30971938404604,10.7307804432187,11.6355228308633,13.727743762103,12.7168969551514,8.51440431060424,9.78293669387591,10.5112416601139,10.8107447312262,11.2431056192427,16.0259495896917,12.5412123071257,11.4581633301639,12.6586300478357,10.0523840600522,8.23684239564244,31.629005436018,8.18710084870708,14.0416952901552,18.4382580901392,12.19902411949,10.1313139486307,16.2582807346612,7.57965647081939,8.47417877498535,11.8821560042632,12.9079636558676,14.0705256251125,13.8065311713888,22.6355031515047,17.4975009957872,15.5025282754142,21.6858485374182,23.9240439484977,19.3407179689803,17.3578870297814,16.5870412333199,6.52686820582452,16.2282210096282,15.452457793065,6.74312477948726,7.97039468826982,4.42624352517024,7.32165688892682,7.2566890465739,7.02789739733949,9.26320610251035,6.93009514062401,7.35235624471901,13.587673477864,8.09621403349789,8.18316402151673,9.48690667071656,11.8888887076069,9.08416545332919,8.54714897602825,11.5649741141039,11.8778488540226,15.9294166007955,6.06951590387454,7.25576536715402,13.3909606626688,6.496641643377,15.3717573971964,14.7304127105886,16.3590178264877,13.1904030002347,19.9103157499564,17.9211634577498,18.5643977846736,7.48967132658334,8.10274923140896,2.97524972700335,4.71541477069503,6.7389288784064,8.20496560969525,5.92376474167636,6.69822888052118,7.74416636610244,9.53244318887191,13.4522322813527,37.5940656706575,16.3079070962865,16.4051155804584,17.7864792564673,20.8458942676228,8.45294426226567,5.37733375830478,18.2831842453702,11.9704383418669,15.5563402990558,21.0972671845254,26.6553744055999,21.7339264546196,15.6380155594347,17.9137858974282,17.5513966731618,3.81868247206045,5.53587988766987,9.75933442208874,11.2325554454673,15.4725339050707,11.7915784422936,11.8680624818642,12.8939390931524,12.0407733312654,12.1838074894285,17.3975007664339,5.6369293868419,8.52244312450679,4.13646226142744,8.16694991045,8.26622870257479,7.43406952159424,8.80179289843155,12.6298253298632,9.96163772044253,16.1861360953424,11.2331702440568,14.220500428268,5.87903124341476,9.86025188782342,10.133824192268,11.6367352183863,15.8945083825012,19.9524446203148,19.3473280598696,23.8280821877628,18.213426790545,20.871020323326,22.9026019738418,28.8635524920988,25.2454108712189,14.2840141677583,4.43971906748129,9.50966880060442,7.38692312001945,14.8755987404787,9.94717119891265,10.2564909589668,8.57473516316263,17.0534515372024,2.82375921308533,4.60325236507177,4.58316410751517,5.499301834998,4.11049511862385,4.5323633843382,6.07520250208625,7.20513925158753,8.15656336171568,7.24864436452548,7.88783841639743,6.3843979744165,6.14640980714883,9.23805524859517,5.8691685535835,9.37601893095072,8.22312892865976,9.47761263298913,7.70206103020357,7.83361356467772,10.6461305953901,12.449338531481,11.4242639113257,11.5245274328765,11.9465775427676,12.3836359733599,10.6613579869267,13.6965546529231,11.1263193216893,13.8366984926333,8.22886205724997,11.5359274003569,10.0143199777875,9.59286349773368,10.0697037044404,11.253742849593,12.9878860739669,10.7858581689516,11.1359373353607,11.2228454331548,7.94854621431967,11.6235289203165,10.6400071224119,11.7751999301334,9.83823716003821,5.24602213669686,9.35726433781634,8.16510005383534,8.99055160723564,9.04424818390014,7.65163857547391
|short_description=p1@Arid4a
}}

Revision as of 04:47, 5 August 2015

Short description:p1@Arid4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arid4a_5end
Coexpression cluster:MCL_coexpression_mm9:317
Association with transcript: 0bp_to_ENSMUST00000046305, ENSMUST00000134718, NM_001081195, uc007nud.1, uc011ynm.1_5end
EntrezGene:238247
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Arid4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I630.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.65
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F237.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.10
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.44
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.18
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A433.18
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H920.67
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I213.57
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C114.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G841.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H138.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G966.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H448.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I964.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A145.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D98.56
Mouse Schwann, donor2.CNhs12573.11746-123F98.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H957.48
adrenal gland, adult.CNhs10508.49-24D710.09
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F59.34
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I38.67
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F511.49
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.10
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.04
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G414.94
eyeball, embryo E12.CNhs11016.345-16C68.07
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C613.13
eyeball, neonate N01.CNhs11140.1532-43E713.45
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.63
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C612.03
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E39.22
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G117.19
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D312.08
heart, neonate N30.CNhs11202.1390-42D210.47
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D811.34
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G112.15
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F88.57
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G710.73
kidney, neonate N10.CNhs11206.758-6D511.64
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F312.72
kidney, neonate N30.CNhs11203.1385-42H18.51
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F810.51
liver, embryo E13.CNhs10524.378-3H610.81
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D716.03
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F410.05
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A318.44
liver, neonate N25.CNhs11198.1368-26H112.20
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C511.88
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A614.07
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C622.64
lung, neonate N06.CNhs11212.683-20E517.50
lung, neonate N07.CNhs11111.715-19A315.50
lung, neonate N10.CNhs11219.750-23E621.69
lung, neonate N20.CNhs11109.822-18A423.92
lung, neonate N25.CNhs11119.1359-25C719.34
lung, neonate N30.CNhs11133.1394-42H217.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H215.45
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H78.55
ovary, neonate N00.CNhs11217.1299-22I411.56
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E513.39
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I715.37
pancreas, neonate N00.CNhs11105.645-26G914.73
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B619.91
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C337.59
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H316.41
skin, neonate N06.CNhs11097.693-20I517.79
skin, neonate N10.CNhs11108.762-6C420.85
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G218.28
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F215.56
spleen, neonate N10.CNhs11116.752-24D121.10
spleen, neonate N20.CNhs11112.824-19H126.66
spleen, neonate N25.CNhs11099.1354-25G321.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.55
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D411.23
stomach, embryo E17.CNhs11006.1035-18D515.47
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A912.89
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I112.18
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F58.52
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B78.80
testis, neonate N07.CNhs11222.726-26I412.63
testis, neonate N10.CNhs11204.763-44D99.96
testis, neonate N20.CNhs11110.839-18H316.19
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B514.22
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I29.86
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G415.89
thymus, neonate N02.CNhs11181.1541-43F819.95
thymus, neonate N03.CNhs11137.2104-43C719.35
thymus, neonate N06.CNhs11197.681-26C423.83
thymus, neonate N07.CNhs11211.713-19D318.21
thymus, neonate N10.CNhs11194.748-24E420.87
thymus, neonate N20.CNhs11186.820-7A222.90
thymus, neonate N25.CNhs11125.1362-25G728.86
thymus, neonate N30.CNhs11132.1393-42G225.25
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E414.88
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I87.89
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.42
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.99
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.78
whole body, embryo E17.5.CNhs10513.490-9F99.84
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B47.65





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endo-epithelium6.21e-1169
subdivision of digestive tract1.59e-10114
digestive system4.19e-10116
digestive tract4.19e-10116
primitive gut4.19e-10116
endoderm-derived structure8.70e-10118
endoderm8.70e-10118
presumptive endoderm8.70e-10118
foregut1.06e-0880
gut epithelium4.67e-0855
hemopoietic organ5.46e-0829
immune organ5.46e-0829
mixed endoderm/mesoderm-derived structure9.57e-0835
hematopoietic system4.78e-0745
blood island4.78e-0745
respiratory system5.15e-0742
hemolymphoid system5.86e-0748
immune system5.86e-0748
unilaminar epithelium7.03e-0766
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