FFCP PHASE1:Mm9::chr17:5841394..5841410,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66616|HGNC=|MCL_coexpression_id=1505|UniProt=Q3U1P2,Q91VH2|association_with_transcript=14bp_to_NM_025664,uc008afj.1_5end|description=CAGE_peak_4_at_Snx9_5end|id=chr17:5841394..5841410,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.73e-09!15;UBERON:0004923!8.85e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13;UBERON:0000160!1.24e-07!43;UBERON:0005409!3.39e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-14,31;UBERON:0005409,5.15e-11,47;UBERON:0000344,1.32e-09,15;UBERON:0001242,2.53e-08,13;UBERON:0001262,2.53e-08,13;UBERON:0004786,2.53e-08,13;UBERON:0004923,3.55e-08,24|phase1_expression=0.640595388419176,12.2141392673776,8.18998630901165,11.7961042409664,8.01433167914156,3.86122325397347,4.43864017131499,0,3.23814060948833,2.34064526321993,2.39705155515707,0.957265907944037,0.171200729931206,0,0.666219523631325,1.01237633694913,0.699561878128147,3.15462165358238,3.15363197293199,6.36584477697045,1.78590909317247,1.58865521921416,1.56719873483361,5.27974995218242,4.35877634027623,7.46501553349526,6.46142994238612,5.60225204983311,6.84084310042946,6.04872311423834,6.43018480900384,0,2.46025915033828,0,1.73310971850765,1.99481574430191,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,2.64383317748712,3.75094645512204,0.917733760808408,0,3.2703773457067,1.31811709640683,2.91644848611425,1.81982348112971,2.87505128729943,5.36904339384756,0,0.336093799142464,1.54355661621568,2.0057340795713,4.12537673821954,0,0,0,2.37191172448392,3.55717918444456,5.39939830368839,3.9554654502679,4.2628806896766,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.61119299110724,0,0.142371680799103,0,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0.679971333707751,1.07940638327563,3.89865850468601,0.448026887097336,1.40444420131752,1.02258193546835,1.81850203222008,3.5333957451034,1.12674735821344,0,2.54805239706646,0,0.649473123033642,0.760079596425296,3.0331466700887,1.7127581957859,2.58937883647172,1.1875371125186,0.520455980298408,0,0.922461989024234,0.452167921657868,0.940709657085638,0.628332956648377,4.20231445148436,3.32578520915797,2.65383165584962,0.970601099684455,1.10420759230197,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,4.59822699375465,0.958520996047362,2.99951365496704,0.762421362438388,0.898743836428936,0,0.125654352112864,0.521472960576829,1.27857728665165,0.83115217823824,1.1356888414743,1.62942982160506,2.11491850037158,1.76905930903572,1.05220927943237,0.520481771850815,0.919608417733892,0.900310649026746,1.05493372485001,1.2246569847239,1.15302348256365,0.937017245597288,1.03481348295606,1.07783996466421,1.70195472151037,0.351902248327898,0.876782929710299,0.556094498451196,1.74126083261083,2.26360350048738,0.398068533636986,0.702213187313235,0.772043721344145,0.284163499395593,1.24275463521301,0.938104239924385,0.900310307305074,3.31442629819294,0.590292695242212,0.617068451549513,1.16266972375204,1.07309360559848,1.98501082024188,1.15191894939436,0.820837320395476,1.62137619091711,1.60819986167866,1.3173006917463,1.74468344388483,0.841159794256509,0.308713837137853,7.59963200862735,3.70230793328962,1.2797295032114,0.928946687441754,1.41754207454303,2.01683524623343,2.66853652613844,2.85338439168839,6.64340686162316,3.95277491337626,2.76468729680296,3.97912944082302,3.11942539390592,3.59527763461689,2.59365659849633,5.37681437786791,0.569003702859245,0.456994050438915,0,0.814605311381257,1.16371492300575,1.33258057791605,2.15004226222475,2.50937251565324,1.56998727841375,3.33172342588861,1.1858105083486,0.83422552858047,1.17935397067922,1.34917267430912,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,3.34926852901653,1.5601883655728,2.52578877947112,1.79397413521912,3.85954817090694,1.84753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.714130922658041,0,0.630540576424764,2.21464689648775,3.50800491046472,1.14704320301017,0.690739927463582,1.44649058581512,6.03165135757089,2.71952841909355,1.96705709207614,2.75936746304733,0.80275294993896,0.937693492737625,2.13115428989678,1.51482556322624,0.631016438832513,0,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,1.24645922567079,0.977321756121456,1.97964147567043,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.680879211507576,2.16073312837572,0.646793418913773,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,3.98941903708308,3.60114520468494,1.54369878638473,2.14352128823924,3.87514624070173,1.80938774784468,2.14870219205646,2.29797259643086,3.49777003955821,0.370850604021019,1.19609616558497,1.44470807574256,0.740778109478847,0.565105371014073,1.50363650493128,0.686334519619568,0.679913719975421,1.39951452323658,1.52019971184866,2.86401185404534,0.632671987162271,1.01659733563424,1.51207477150522,0.836353184057875,2.40198820120795,0.944050424693745,1.81837602595739,3.66458318777641,2.20345454596048,1.24267862617385,0,1.04661582230785,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.5256441023948,1.0416350787516,0.629156066554265,0.966336483304024,1.15212002503146,0.316011120628178,0.405450430580328,0.513554785824136,0,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.304827226619999,0.100826185136841,0.584747284438515,0.288635524920988,0.350630706544707,1.81384306892169,2.66383144048878,2.78112955489375,2.68615386182526,1.54551675225752,1.87682475451182,1.09890974560359,1.50057865355346,1.50471631210609,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.419226325255965,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,1.12369808963859,1.40855335290712,0.804096565378586,2.38146845641537,1.97003354106254,1.35036454324594,1.64834360321323,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,0.676916863133412,0.548783918618318,2.10455769150274,1.08643291076689,0,1.30498519936592,0.985044823755635,0.818462086339379,1.85924209423159,0.964533054905707,1.74867404556562,1.87145286756327,2.57845264857958,2.10417165275728,1.54413993383661,1.62307484934295|short_description=p4@Snx9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66616 | |||
|HGNC= | |||
|MCL_coexpression_id=1505 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U1P2,uniprot:Q91VH2 | |||
|association_with_transcript=14bp_to_NM_025664,uc008afj.1_5end | |||
|cluster_id=chr17:5841394..5841410,+ | |||
|description=CAGE_peak_4_at_Snx9_5end | |||
|id=chr17:5841394..5841410,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.73e-09!15;UBERON:0004923!8.85e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13;UBERON:0000160!1.24e-07!43;UBERON:0005409!3.39e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-14,31;UBERON:0005409,5.15e-11,47;UBERON:0000344,1.32e-09,15;UBERON:0001242,2.53e-08,13;UBERON:0001262,2.53e-08,13;UBERON:0004786,2.53e-08,13;UBERON:0004923,3.55e-08,24 | |||
|phase1_expression=0.640595388419176,12.2141392673776,8.18998630901165,11.7961042409664,8.01433167914156,3.86122325397347,4.43864017131499,0,3.23814060948833,2.34064526321993,2.39705155515707,0.957265907944037,0.171200729931206,0,0.666219523631325,1.01237633694913,0.699561878128147,3.15462165358238,3.15363197293199,6.36584477697045,1.78590909317247,1.58865521921416,1.56719873483361,5.27974995218242,4.35877634027623,7.46501553349526,6.46142994238612,5.60225204983311,6.84084310042946,6.04872311423834,6.43018480900384,0,2.46025915033828,0,1.73310971850765,1.99481574430191,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,2.64383317748712,3.75094645512204,0.917733760808408,0,3.2703773457067,1.31811709640683,2.91644848611425,1.81982348112971,2.87505128729943,5.36904339384756,0,0.336093799142464,1.54355661621568,2.0057340795713,4.12537673821954,0,0,0,2.37191172448392,3.55717918444456,5.39939830368839,3.9554654502679,4.2628806896766,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,1.14918604276669,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,0.61119299110724,0,0.142371680799103,0,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0.679971333707751,1.07940638327563,3.89865850468601,0.448026887097336,1.40444420131752,1.02258193546835,1.81850203222008,3.5333957451034,1.12674735821344,0,2.54805239706646,0,0.649473123033642,0.760079596425296,3.0331466700887,1.7127581957859,2.58937883647172,1.1875371125186,0.520455980298408,0,0.922461989024234,0.452167921657868,0.940709657085638,0.628332956648377,4.20231445148436,3.32578520915797,2.65383165584962,0.970601099684455,1.10420759230197,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,4.59822699375465,0.958520996047362,2.99951365496704,0.762421362438388,0.898743836428936,0,0.125654352112864,0.521472960576829,1.27857728665165,0.83115217823824,1.1356888414743,1.62942982160506,2.11491850037158,1.76905930903572,1.05220927943237,0.520481771850815,0.919608417733892,0.900310649026746,1.05493372485001,1.2246569847239,1.15302348256365,0.937017245597288,1.03481348295606,1.07783996466421,1.70195472151037,0.351902248327898,0.876782929710299,0.556094498451196,1.74126083261083,2.26360350048738,0.398068533636986,0.702213187313235,0.772043721344145,0.284163499395593,1.24275463521301,0.938104239924385,0.900310307305074,3.31442629819294,0.590292695242212,0.617068451549513,1.16266972375204,1.07309360559848,1.98501082024188,1.15191894939436,0.820837320395476,1.62137619091711,1.60819986167866,1.3173006917463,1.74468344388483,0.841159794256509,0.308713837137853,7.59963200862735,3.70230793328962,1.2797295032114,0.928946687441754,1.41754207454303,2.01683524623343,2.66853652613844,2.85338439168839,6.64340686162316,3.95277491337626,2.76468729680296,3.97912944082302,3.11942539390592,3.59527763461689,2.59365659849633,5.37681437786791,0.569003702859245,0.456994050438915,0,0.814605311381257,1.16371492300575,1.33258057791605,2.15004226222475,2.50937251565324,1.56998727841375,3.33172342588861,1.1858105083486,0.83422552858047,1.17935397067922,1.34917267430912,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,3.34926852901653,1.5601883655728,2.52578877947112,1.79397413521912,3.85954817090694,1.84753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.714130922658041,0,0.630540576424764,2.21464689648775,3.50800491046472,1.14704320301017,0.690739927463582,1.44649058581512,6.03165135757089,2.71952841909355,1.96705709207614,2.75936746304733,0.80275294993896,0.937693492737625,2.13115428989678,1.51482556322624,0.631016438832513,0,0.646270193198397,0.955875191810208,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,1.24645922567079,0.977321756121456,1.97964147567043,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,0.922305443831782,1.80899805217755,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0.680879211507576,2.16073312837572,0.646793418913773,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,3.98941903708308,3.60114520468494,1.54369878638473,2.14352128823924,3.87514624070173,1.80938774784468,2.14870219205646,2.29797259643086,3.49777003955821,0.370850604021019,1.19609616558497,1.44470807574256,0.740778109478847,0.565105371014073,1.50363650493128,0.686334519619568,0.679913719975421,1.39951452323658,1.52019971184866,2.86401185404534,0.632671987162271,1.01659733563424,1.51207477150522,0.836353184057875,2.40198820120795,0.944050424693745,1.81837602595739,3.66458318777641,2.20345454596048,1.24267862617385,0,1.04661582230785,0.66183396182839,0.388902376688095,1.03327858782185,0.844780627453891,1.5256441023948,1.0416350787516,0.629156066554265,0.966336483304024,1.15212002503146,0.316011120628178,0.405450430580328,0.513554785824136,0,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.304827226619999,0.100826185136841,0.584747284438515,0.288635524920988,0.350630706544707,1.81384306892169,2.66383144048878,2.78112955489375,2.68615386182526,1.54551675225752,1.87682475451182,1.09890974560359,1.50057865355346,1.50471631210609,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.419226325255965,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.13175804831646,1.12369808963859,1.40855335290712,0.804096565378586,2.38146845641537,1.97003354106254,1.35036454324594,1.64834360321323,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,0.581385666529314,0.752875043322645,0.676916863133412,0.548783918618318,2.10455769150274,1.08643291076689,0,1.30498519936592,0.985044823755635,0.818462086339379,1.85924209423159,0.964533054905707,1.74867404556562,1.87145286756327,2.57845264857958,2.10417165275728,1.54413993383661,1.62307484934295 | |||
|short_description=p4@Snx9 | |||
}} |
Revision as of 05:09, 5 August 2015
Short description: | p4@Snx9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Snx9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1505 |
Association with transcript: | 14bp_to_NM_025664, uc008afj.1_5end |
EntrezGene: | 66616 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.83e-14 | 31 |
gastrointestinal system | 5.15e-11 | 47 |
mucosa | 1.32e-09 | 15 |
intestinal mucosa | 2.53e-08 | 13 |
wall of intestine | 2.53e-08 | 13 |
gastrointestinal system mucosa | 2.53e-08 | 13 |
organ component layer | 3.55e-08 | 24 |