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FFCP PHASE1:Mm9::chr9:55359963..55360037,-: Difference between revisions

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{{FFCP|EntrezGene=110842|HGNC=|MCL_coexpression_id=201|UniProt=Q99LC5,B1B1B4|association_with_transcript=12bp_to_ENSMUST00000034866,NM_145615,uc009psl.2_5end|description=CAGE_peak_1_at_Etfa_5end|id=chr9:55359963..55360037,-|ontology_enrichment_celltype=CL:0000066!6.29e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.29e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.23e-12!47;UBERON:0009854!3.48e-09!23;UBERON:0009856!3.48e-09!23;UBERON:0002365!5.22e-09!25;UBERON:0002330!5.22e-09!25;UBERON:0002107!6.22e-09!22;UBERON:0007499!6.22e-09!22;UBERON:0006925!6.22e-09!22;UBERON:0009497!6.22e-09!22;UBERON:0000015!6.22e-09!22;UBERON:0002423!6.22e-09!22;UBERON:0006235!6.22e-09!22;UBERON:0008835!6.22e-09!22;UBERON:0003894!6.22e-09!22;UBERON:0004161!6.22e-09!22;UBERON:0008836!6.22e-09!22;UBERON:0001007!1.84e-07!128;UBERON:0001555!1.84e-07!128;UBERON:0007026!1.84e-07!128;UBERON:0004119!2.86e-07!130;UBERON:0000925!2.86e-07!130;UBERON:0006595!2.86e-07!130;UBERON:0004921!5.25e-07!126;UBERON:0004185!5.25e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.23e-12,47;UBERON:0009854,3.48e-09,23;UBERON:0009856,3.48e-09,23;UBERON:0002365,5.22e-09,25;UBERON:0002330,5.22e-09,25;UBERON:0002107,6.22e-09,22;UBERON:0007499,6.22e-09,22;UBERON:0006925,6.22e-09,22;UBERON:0009497,6.22e-09,22;UBERON:0000015,6.22e-09,22;UBERON:0002423,6.22e-09,22;UBERON:0006235,6.22e-09,22;UBERON:0008835,6.22e-09,22;UBERON:0003894,6.22e-09,22;UBERON:0004161,6.22e-09,22;UBERON:0008836,6.22e-09,22;UBERON:0001007,2.60e-07,116;UBERON:0001555,2.60e-07,116;UBERON:0007026,2.60e-07,116;UBERON:0004119,4.16e-07,118;UBERON:0000925,4.16e-07,118;UBERON:0006595,4.16e-07,118;UBERON:0000160,4.93e-07,31;UBERON:0004921,7.39e-07,114;UBERON:0003104,7.56e-07,61;UBERON:0009142,7.56e-07,61|phase1_expression=41.6387002472464,276.737498258013,298.479501039536,216.261911084383,193.846647489236,137.996761511573,133.626430420641,24.9208014242242,16.04991432529,16.3845168425395,19.0051944730311,17.2307863429927,28.9329233583738,25.8764391160232,53.297561890506,46.1643609648803,46.1710839564577,27.4452083861667,27.834230021965,37.7706790100247,42.1814719149306,43.1915637723851,49.1055603581199,156.792574337539,146.821939882989,336.499930971402,296.364253357443,224.521024458696,162.280000215743,172.892669015312,133.703497925149,14.6057054895715,16.6067492647834,15.8481681015439,87.8108924043875,105.392765157284,87.9969925490811,35.5751886126372,42.973443948809,41.3583757739301,24.1174910092716,32.7861832780054,36.8987868303677,61.3117503541061,64.8812359804893,69.5642190692773,8.60630478782843,19.8402892306206,21.0898735425093,27.2201858703997,32.8968090819602,24.4379359420452,29.1941734540461,32.6412963905105,32.601098516819,49.1365522828659,61.0316227069552,54.1455696891314,13.1505699558739,12.1667925232568,12.0427966666174,13.5537812827653,16.0073063300005,12.5985960419396,11.8663963508037,19.1829631035447,12.8828047522914,25.3584081512226,19.7010263386108,14.850653216486,17.2466468308133,25.1372866275347,30.0381215694194,18.0061474845982,13.5142114135713,12.8690630125403,42.9451935897616,36.5185786923637,39.1696659803421,13.8480602116704,14.1805847583735,10.939180781692,37.4105218661851,39.9561453122493,43.8530971119445,46.8459450903132,40.4335573469452,22.927131836512,39.5290729199221,41.1865002581981,43.18980881655,378.58650587181,300.547329498826,569.926570369535,549.710849160728,544.352667823263,212.351963239209,81.8065548374677,98.1991097398844,103.175155757019,56.1965244908955,128.326477414318,180.911720191718,127.9920065676,48.7104842275232,48.3917343057438,41.958528936227,256.114442209852,31.5904218049549,78.6743337043571,56.0357605454619,89.2083851454574,93.3992763887037,126.305572783098,83.252804652079,250.704849702703,48.4502136759373,713.742425756684,61.0381280845413,84.604062522495,95.8452190118108,64.9732839201198,149.113408974498,31.034764483224,34.7681533310335,122.619386500124,41.3362179545425,86.9858959940441,47.0159840170339,25.7639899776295,24.7050325522058,12.8167439155122,20.5112697826886,19.1786592997748,28.8825381937789,24.1739481970959,30.6536485189452,51.0068579501381,49.5336606530002,102.06430010494,26.6746908073543,32.1862946206862,24.8485739131382,36.6212707340788,23.5406287063594,31.3878614697882,31.2026742783897,51.9993775185421,22.2035032720827,26.2857451433269,28.8559843628876,34.1945342587017,32.2534809101694,52.9343293113693,51.2397519655779,37.2194078950582,70.2213187313235,62.0208456146464,54.5593918839538,63.5876121683991,65.4327707347258,83.3687344564499,72.4438890890743,97.9885874102071,125.881964116101,146.031317303256,163.378501452368,188.692793265346,251.118330967971,320.619057346473,356.540624382674,427.781163206522,360.501289307905,445.565310284434,25.2347938276953,16.4647379806855,189.329962649716,133.018635031763,40.098191100624,40.4091809037163,49.8717075316501,68.5723983719365,86.0603029679648,105.57522249247,130.020962863196,92.3961136001701,125.91893960893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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:110842
|HGNC=
|MCL_coexpression_id=201
|TSSclassifier=NA
|UniProt=uniprot:Q99LC5,uniprot:B1B1B4
|association_with_transcript=12bp_to_ENSMUST00000034866,NM_145615,uc009psl.2_5end
|cluster_id=chr9:55359963..55360037,-
|description=CAGE_peak_1_at_Etfa_5end
|id=chr9:55359963..55360037,-
|ontology_enrichment_celltype=CL:0000066!6.29e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,6.29e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.23e-12!47;UBERON:0009854!3.48e-09!23;UBERON:0009856!3.48e-09!23;UBERON:0002365!5.22e-09!25;UBERON:0002330!5.22e-09!25;UBERON:0002107!6.22e-09!22;UBERON:0007499!6.22e-09!22;UBERON:0006925!6.22e-09!22;UBERON:0009497!6.22e-09!22;UBERON:0000015!6.22e-09!22;UBERON:0002423!6.22e-09!22;UBERON:0006235!6.22e-09!22;UBERON:0008835!6.22e-09!22;UBERON:0003894!6.22e-09!22;UBERON:0004161!6.22e-09!22;UBERON:0008836!6.22e-09!22;UBERON:0001007!1.84e-07!128;UBERON:0001555!1.84e-07!128;UBERON:0007026!1.84e-07!128;UBERON:0004119!2.86e-07!130;UBERON:0000925!2.86e-07!130;UBERON:0006595!2.86e-07!130;UBERON:0004921!5.25e-07!126;UBERON:0004185!5.25e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.23e-12,47;UBERON:0009854,3.48e-09,23;UBERON:0009856,3.48e-09,23;UBERON:0002365,5.22e-09,25;UBERON:0002330,5.22e-09,25;UBERON:0002107,6.22e-09,22;UBERON:0007499,6.22e-09,22;UBERON:0006925,6.22e-09,22;UBERON:0009497,6.22e-09,22;UBERON:0000015,6.22e-09,22;UBERON:0002423,6.22e-09,22;UBERON:0006235,6.22e-09,22;UBERON:0008835,6.22e-09,22;UBERON:0003894,6.22e-09,22;UBERON:0004161,6.22e-09,22;UBERON:0008836,6.22e-09,22;UBERON:0001007,2.60e-07,116;UBERON:0001555,2.60e-07,116;UBERON:0007026,2.60e-07,116;UBERON:0004119,4.16e-07,118;UBERON:0000925,4.16e-07,118;UBERON:0006595,4.16e-07,118;UBERON:0000160,4.93e-07,31;UBERON:0004921,7.39e-07,114;UBERON:0003104,7.56e-07,61;UBERON:0009142,7.56e-07,61
|phase1_expression=41.6387002472464,276.737498258013,298.479501039536,216.261911084383,193.846647489236,137.996761511573,133.626430420641,24.9208014242242,16.04991432529,16.3845168425395,19.0051944730311,17.2307863429927,28.9329233583738,25.8764391160232,53.297561890506,46.1643609648803,46.1710839564577,27.4452083861667,27.834230021965,37.7706790100247,42.1814719149306,43.1915637723851,49.1055603581199,156.792574337539,146.821939882989,336.499930971402,296.364253357443,224.521024458696,162.280000215743,172.892669015312,133.703497925149,14.6057054895715,16.6067492647834,15.8481681015439,87.8108924043875,105.392765157284,87.9969925490811,35.5751886126372,42.973443948809,41.3583757739301,24.1174910092716,32.7861832780054,36.8987868303677,61.3117503541061,64.8812359804893,69.5642190692773,8.60630478782843,19.8402892306206,21.0898735425093,27.2201858703997,32.8968090819602,24.4379359420452,29.1941734540461,32.6412963905105,32.601098516819,49.1365522828659,61.0316227069552,54.1455696891314,13.1505699558739,12.1667925232568,12.0427966666174,13.5537812827653,16.0073063300005,12.5985960419396,11.8663963508037,19.1829631035447,12.8828047522914,25.3584081512226,19.7010263386108,14.850653216486,17.2466468308133,25.1372866275347,30.0381215694194,18.0061474845982,13.5142114135713,12.8690630125403,42.9451935897616,36.5185786923637,39.1696659803421,13.8480602116704,14.1805847583735,10.939180781692,37.4105218661851,39.9561453122493,43.8530971119445,46.8459450903132,40.4335573469452,22.927131836512,39.5290729199221,41.1865002581981,43.18980881655,378.58650587181,300.547329498826,569.926570369535,549.710849160728,544.352667823263,212.351963239209,81.8065548374677,98.1991097398844,103.175155757019,56.1965244908955,128.326477414318,180.911720191718,127.9920065676,48.7104842275232,48.3917343057438,41.958528936227,256.114442209852,31.5904218049549,78.6743337043571,56.0357605454619,89.2083851454574,93.3992763887037,126.305572783098,83.252804652079,250.704849702703,48.4502136759373,713.742425756684,61.0381280845413,84.604062522495,95.8452190118108,64.9732839201198,149.113408974498,31.034764483224,34.7681533310335,122.619386500124,41.3362179545425,86.9858959940441,47.0159840170339,25.7639899776295,24.7050325522058,12.8167439155122,20.5112697826886,19.1786592997748,28.8825381937789,24.1739481970959,30.6536485189452,51.0068579501381,49.5336606530002,102.06430010494,26.6746908073543,32.1862946206862,24.8485739131382,36.6212707340788,23.5406287063594,31.3878614697882,31.2026742783897,51.9993775185421,22.2035032720827,26.2857451433269,28.8559843628876,34.1945342587017,32.2534809101694,52.9343293113693,51.2397519655779,37.2194078950582,70.2213187313235,62.0208456146464,54.5593918839538,63.5876121683991,65.4327707347258,83.3687344564499,72.4438890890743,97.9885874102071,125.881964116101,146.031317303256,163.378501452368,188.692793265346,251.118330967971,320.619057346473,356.540624382674,427.781163206522,360.501289307905,445.565310284434,25.2347938276953,16.4647379806855,189.329962649716,133.018635031763,40.098191100624,40.4091809037163,49.8717075316501,68.5723983719365,86.0603029679648,105.57522249247,130.020962863196,92.3961136001701,125.918939608935,117.981187920402,106.645355654159,112.352426081778,131.628072373689,129.04354506883,23.8981555200883,41.5864585899413,31.5581659884625,50.3018779777926,58.3796986374553,63.9638677399705,98.8387075252141,172.851483284114,200.330376725594,228.037958927487,471.359677068567,44.2139530147649,52.284692700112,63.1862535801439,82.7669295265092,100.329698457005,153.030136920633,165.425279034216,135.220779130379,356.38071431813,363.733562514207,341.253249012018,446.525910226936,504.400019260382,451.543289834653,499.811488132448,46.5578039219844,39.6037050600313,30.6374155711009,39.0413697282933,41.5401739470649,42.714095647663,39.9913316688503,39.807264162991,37.6747994413796,38.3133913092381,49.112068746506,60.4655631301073,62.1665934717224,51.3504157964366,60.3165135757089,64.1808706906077,67.371705403608,70.3638703077068,36.1238827472532,33.6397540519623,65.0821733145401,200.966858054681,47.6417411318548,38.2629969410706,30.5901224780574,38.951914066266,35.8705865272655,30.8553418559827,38.0522059574401,37.9932615284705,30.0418711239358,23.4564560987919,57.9115547649736,31.1614806417697,32.9031657894224,33.4889349634247,70.3549233201803,46.1283208694465,54.7205638106199,62.6168864789582,35.4362271456927,47.3450127833648,50.6519454609713,50.1676546678958,57.3960779199401,66.0516824085855,68.5220955737492,77.3516574361401,44.5975883537462,28.0895306688844,25.3543020214199,31.5075441496441,34.9360260275279,35.495394702812,38.3399218002942,25.5750557256263,39.4248469547033,47.8740480152234,46.7520203876519,60.8430273354061,63.7784485448827,73.0389520879967,65.0579274817094,57.7775967102616,111.054198755973,31.5223013417866,36.2246267291448,39.6262786489387,35.0017656728755,50.4827464772572,37.1808299401188,40.0361803111415,40.6248447685314,37.5069892227403,35.5173932677369,153.701969500433,34.3224553035532,43.5103659651456,58.9709160887035,61.4719590282538,75.5534470561775,107.891477107857,117.037293307076,163.07395185605,150.223754045188,96.3075935284735,24.8024893021044,36.1830041426429,48.9757131753009,43.9459685657548,49.468212391971,56.7692581649015,44.5957506853865,52.6025714769558,51.3810787685983,32.3722721906848,43.4925309449377,46.4536347323422,65.6829697540132,66.9675440714674,58.4643703400078,48.1581811345525,50.26638275966,43.1501663776688,46.5222010599918,53.5122184725182,42.5996049201449,38.1122979817257,35.5721264700096,34.6362629905186,31.0892559802973,172.768552314791,41.7333592343242,21.5313255862742,38.2776925310099,45.9791233796613,51.2373157981727,39.377599217462,102.039348441635,30.0943262421218,22.0253218620656,31.302116082488,30.363462212288,28.5276282690521,28.773465830367,24.1726047164704,29.0259675099676,22.516060161211,24.469690085147,22.7814537170801,33.6271006172732,20.3502685434526,35.1711227853516,55.1852247745027,61.6262698126268,181.821229857064,174.019187868665,158.44095901671,163.347877682234,173.097590058201,165.268503528436,179.383650658158,168.086505908439,153.148164552447,158.29215244167,175.752372083454,177.303018695629,161.657926748585,176.784851444619,165.009989470659,190.978173578676,183.509983568755,169.289694862598,177.322628291441,169.020447225934,181.498333927646,165.915671395605,197.56535328982,167.03906003041,172.831819670583,175.579826823778,173.564897945743,200.523211153148,184.064967328928,122.688604584006,46.7145780743959,155.798451224642,152.343577320243,224.763790180891,205.150019781149,267.807350141587
|short_description=p1@Etfa
}}

Revision as of 08:20, 5 August 2015

Short description:p1@Etfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Etfa_5end
Coexpression cluster:MCL_coexpression_mm9:201
Association with transcript: 12bp_to_ENSMUST00000034866, NM_145615, uc009psl.2_5end
EntrezGene:110842
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Etfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5276.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6298.48
CD326+ enterocyte, pool1.CNhs13542.11848-124I3216.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I4193.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7138.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8133.63
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A153.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A346.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A637.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H243.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I949.11
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1156.79
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2146.82
GP2+ M cell, pool1.CNhs13228.11845-124H9336.50
GP2+ M cell, pool2.CNhs13231.11846-124I1296.36
GP2+ M cell, pool3.CNhs13240.11847-124I2224.52
Ileum epithelium, pool1.CNhs13199.10252-104B9162.28
Ileum epithelium, pool2.CNhs13232.10253-104C1172.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8133.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F587.81
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6105.39
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F788.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H341.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D861.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D964.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B369.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C432.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.60
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C149.14
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E161.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C554.15
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.17
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D646.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.93
Mouse Schwann, donor1.CNhs12507.11728-123D939.53
Mouse Schwann, donor2.CNhs12573.11746-123F941.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7378.59
Mouse hepatocyte, donor1.CNhs13078.11714-123C4300.55
Mouse hepatocyte, donor3.CNhs12615.11637-122C8569.93
Mouse hepatocyte, donor6.CNhs13090.11822-124F4549.71
Mouse hepatocyte, donor8.CNhs13091.11824-124F6544.35
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7212.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I781.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E398.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8103.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G656.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1128.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8180.91
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G148.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G248.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G341.96
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6256.11
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D778.67
adrenal gland, embryo E14.CNhs11038.406-44C556.04
adrenal gland, embryo E16.CNhs11004.1254-43D689.21
adrenal gland, embryo E17.CNhs11043.1263-45I193.40
adrenal gland, embryo E18.CNhs11026.1262-18F5126.31
adrenal gland, neonate N00.CNhs11191.1311-23C183.25
adrenal gland, neonate N25.CNhs11223.1377-27I3250.70
amnion, adult pregnant day17.5.CNhs10488.583-22A848.45
aorta, adult.CNhs10498.46-23H1713.74
bone (os femoris), adult.CNhs10483.56-12G261.04
bone (os femoris), neonate N02.CNhs11227.1985-43F584.60
bone (os femoris), neonate N16.CNhs11225.1525-43A695.85
bone (os femoris), neonate N20.CNhs11195.1350-25C364.97
cecum, adult.CNhs10467.37-13H4149.11
cerebellum, adult.CNhs10494.15-8B231.03
cerebellum, neonate N30.CNhs11135.1395-42I234.77
colon, adult.CNhs10468.36-18H7122.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C741.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D186.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D447.02
corpora quadrigemina, adult.CNhs10501.16-22A425.76
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F112.82
cortex, adult.CNhs10473.12-14D520.51
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F228.88
diencephalon, neonate N30.CNhs11201.1388-42B224.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A251.01
epididymis, adult.CNhs10490.58-23B249.53
eyeball, adult.CNhs10484.31-12G4102.06
eyeball, embryo E12.CNhs11016.345-16C626.67
eyeball, embryo E14.CNhs10521.399-16E232.19
eyeball, embryo E15.CNhs10593.426-16C924.85
eyeball, embryo E17.CNhs11023.1261-18D436.62
eyeball, neonate N00.CNhs11207.633-15C623.54
eyeball, neonate N01.CNhs11140.1532-43E731.39
eyeball, neonate N02.CNhs11205.1551-44G831.20
eyeball, neonate N16.CNhs11188.777-19A252.00
forelimb, embryo E11.CNhs10596.335-25E222.20
forelimb, embryo E12.CNhs10600.359-14H226.29
forelimb, embryo E13.CNhs10589.384-1E228.86
forelimb, embryo E14.CNhs10577.413-26A834.19
forelimb, embryo E15.CNhs11007.437-20E732.25
forelimb, embryo E17.CNhs10598.1517-43C452.93
forelimb, embryo E18.CNhs11008.1520-43B551.24
gonad, embryo E13.CNhs11044.1564-45I637.22
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C870.22
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D262.02
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D554.56
heart, embryo E11.CNhs10586.331-24E963.59
heart, embryo E12.CNhs11015.353-12F565.43
heart, embryo E13.CNhs11013.376-3I983.37
heart, embryo E14.CNhs10597.403-26D472.44
heart, embryo E15.CNhs11017.431-16C897.99
heart, embryo E16.CNhs11021.457-17C6125.88
heart, embryo E17.CNhs11025.479-18E5146.03
heart, embryo E18.CNhs11030.1283-20G3163.38
heart, neonate N00.CNhs11213.639-21E3188.69
heart, neonate N03.CNhs11221.1349-25I2251.12
heart, neonate N10.CNhs11118.749-24G1320.62
heart, neonate N16.CNhs11209.782-15G1356.54
heart, neonate N20.CNhs11127.821-26I6427.78
heart, neonate N25.CNhs11196.1351-25D3360.50
heart, neonate N30.CNhs11202.1390-42D2445.57
hippocampus, adult.CNhs10478.13-16E825.23
hippocampus, neonate N00.CNhs11228.627-43G116.46
intestinal mucosa, adult.CNhs10506.860-29I3189.33
intestine, adult.CNhs10496.178-9A3133.02
intestine, embryo E12.CNhs11019.1251-16I540.10
intestine, embryo E13.CNhs11010.381-16D540.41
intestine, embryo E15.CNhs10602.976-16D849.87
intestine, embryo E16.CNhs10585.463-22H468.57
intestine, embryo E17.CNhs10582.482-18D386.06
intestine, embryo E18.CNhs10526.1289-20F7105.58
intestine, neonate N00.CNhs11126.644-26D1130.02
intestine, neonate N01.CNhs11192.1322-23E992.40
intestine, neonate N06.CNhs11102.688-20B8125.92
intestine, neonate N07.CNhs11095.720-20F2117.98
intestine, neonate N10.CNhs11098.755-23A5106.65
intestine, neonate N20.CNhs11187.827-18D1112.35
intestine, neonate N25.CNhs11121.1352-25E3131.63
intestine, neonate N30.CNhs11131.1384-42G1129.04
kidney, embryo E14.CNhs10606.411-4I923.90
kidney, embryo E15.CNhs10997.434-16F841.59
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I250.30
kidney, embryo E18.CNhs11001.1288-20C758.38
kidney, neonate N00.CNhs11214.646-21G763.96
kidney, neonate N10.CNhs11206.758-6D598.84
kidney, neonate N20.CNhs11113.832-19I1172.85
kidney, neonate N25.CNhs11122.1353-25F3200.33
kidney, neonate N30.CNhs11203.1385-42H1228.04
liver, adult pregnant day01.CNhs10466.508-5B2471.36
liver, embryo E12.CNhs10601.355-15F844.21
liver, embryo E13.CNhs10524.378-3H652.28
liver, embryo E14.CNhs10594.409-16E163.19
liver, embryo E15.CNhs10520.433-16D782.77
liver, embryo E16.CNhs10523.462-17F5100.33
liver, embryo E17.CNhs10510.481-18A3153.03
liver, embryo E18.CNhs10579.499-43G4165.43
liver, neonate N00.CNhs11117.641-24F4135.22
liver, neonate N03.CNhs11123.1345-25G2356.38
liver, neonate N06.CNhs11101.684-20A8363.73
liver, neonate N07.CNhs11103.716-20H2341.25
liver, neonate N10.CNhs11115.751-24B9446.53
liver, neonate N20.CNhs11220.823-25A3504.40
liver, neonate N25.CNhs11198.1368-26H1451.54
liver, neonate N30.CNhs11106.1382-42D1499.81
lung, adult.CNhs10474.28-22B146.56
lung, embryo E12.CNhs10522.354-16G239.60
lung, embryo E14.CNhs10604.404-26F830.64
lung, embryo E15.CNhs11020.432-17C539.04
lung, embryo E16.CNhs10998.458-17B641.54
lung, embryo E17.CNhs10605.480-44A642.71
lung, embryo E18.CNhs10583.1287-20I639.99
lung, neonate N00.CNhs11224.640-42C639.81
lung, neonate N06.CNhs11212.683-20E537.67
lung, neonate N07.CNhs11111.715-19A338.31
lung, neonate N10.CNhs11219.750-23E649.11
lung, neonate N20.CNhs11109.822-18A460.47
lung, neonate N25.CNhs11119.1359-25C762.17
lung, neonate N30.CNhs11133.1394-42H251.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A164.18
mammary gland, adult lactating day02.CNhs10480.595-22B667.37
mammary gland, adult pregnant day19.CNhs10476.588-5H270.36
medulla oblongata, adult.CNhs10477.17-12C236.12
medulla oblongata, neonate N30.CNhs11200.1396-42A333.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C765.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2200.97
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E147.64
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E330.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D738.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D835.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.86
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.99
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.04
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I757.91
ovary, embryo E18.CNhs11040.505-44H731.16
ovary, neonate N00.CNhs11217.1299-22I432.90
oviduct, adult pregnant day01.CNhs10500.988-6G633.49
pancreas, adult.CNhs10486.34-16E470.35
pancreas, embryo E14.CNhs11012.405-44F446.13
pancreas, embryo E15.CNhs11042.1556-45F254.72
pancreas, embryo E16.CNhs11003.460-26E562.62
pancreas, embryo E17.CNhs10599.1558-45G335.44
pancreas, embryo E18.CNhs10580.1535-43I747.35
pancreas, neonate N00.CNhs11105.645-26G950.65
pancreas, neonate N01.CNhs11138.1531-43D750.17
pancreas, neonate N02.CNhs11139.1539-43D857.40
pancreas, neonate N16.CNhs11136.787-43B666.05
pancreas, neonate N25.CNhs11094.1555-45E268.52
pancreas, neonate N30.CNhs11182.1548-44H577.35
pituitary gland, adult.CNhs10493.21-1G844.60
pituitary gland, embryo E12.CNhs11018.346-16E628.09
pituitary gland, embryo E13.CNhs11009.370-44C725.35
pituitary gland, embryo E14.CNhs11037.398-44A531.51
pituitary gland, embryo E15.CNhs10592.427-16B934.94
pituitary gland, embryo E16.CNhs11036.449-43F635.50
pituitary gland, embryo E17.CNhs11039.1265-44F538.34
pituitary gland, neonate N00.CNhs11190.1308-22E925.58
placenta, adult pregnant day10.CNhs10472.539-13I739.42
placenta, adult pregnant day17.CNhs10464.577-18G347.87
prostate, adult.CNhs10470.859-1F846.75
skin, adult.CNhs10492.30-1C360.84
skin, neonate N00.CNhs11124.650-25G463.78
skin, neonate N03.CNhs11215.662-22H373.04
skin, neonate N06.CNhs11097.693-20I565.06
skin, neonate N10.CNhs11108.762-6C457.78
small intestine, neonate N16.CNhs11114.790-21I1111.05
spinal cord, adult.CNhs10505.24-13C931.52
spleen, adult.CNhs10465.25-2G236.22
spleen, embryo E16.CNhs11035.461-43C139.63
spleen, embryo E18.CNhs11011.1271-21F235.00
spleen, neonate N10.CNhs11116.752-24D150.48
spleen, neonate N20.CNhs11112.824-19H137.18
spleen, neonate N25.CNhs11099.1354-25G340.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C640.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.52
stomach, adult.CNhs10503.33-1H6153.70
stomach, embryo E12.CNhs10588.356-43E334.32
stomach, embryo E15.CNhs10603.1252-16G843.51
stomach, embryo E16.CNhs11022.459-17D458.97
stomach, embryo E17.CNhs11006.1035-18D561.47
stomach, embryo E18.CNhs10999.1286-20C675.55
stomach, neonate N03.CNhs11193.1340-24B8107.89
stomach, neonate N07.CNhs11210.718-18A9117.04
stomach, neonate N25.CNhs11104.1355-25E4163.07
stomach, neonate N30.CNhs11134.1386-42I1150.22
submandibular gland, adult.CNhs10469.59-29C196.31
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F536.18
testis, embryo E15.CNhs11034.443-27C548.98
testis, embryo E16.CNhs11033.470-26G543.95
testis, embryo E17.CNhs11029.486-18I549.47
testis, embryo E18.CNhs11027.503-18G556.77
testis, neonate N00.CNhs11189.1300-22B744.60
testis, neonate N07.CNhs11222.726-26I452.60
testis, neonate N10.CNhs11204.763-44D951.38
testis, neonate N20.CNhs11110.839-18H332.37
testis, neonate N30.CNhs11130.1391-42E243.49
thymus, adult.CNhs10471.38-12B546.45
thymus, embryo E14.CNhs11041.402-44I465.68
thymus, embryo E15.CNhs11005.430-45I266.97
thymus, embryo E16.CNhs11002.456-26C558.46
thymus, embryo E17.CNhs10581.478-18C148.16
thymus, embryo E18.CNhs10595.1273-19G450.27
thymus, neonate N02.CNhs11181.1541-43F843.15
thymus, neonate N03.CNhs11137.2104-43C746.52
thymus, neonate N06.CNhs11197.681-26C453.51
thymus, neonate N07.CNhs11211.713-19D342.60
thymus, neonate N10.CNhs11194.748-24E438.11
thymus, neonate N20.CNhs11186.820-7A235.57
thymus, neonate N25.CNhs11125.1362-25G734.64
thymus, neonate N30.CNhs11132.1393-42G231.09
tongue, adult.CNhs10499.32-1B4172.77
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H341.73
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.28
urinary bladder, adult.CNhs10481.879-12E445.98
uterus, adult pregnant day19.CNhs10497.590-15F551.24
uterus, adult.CNhs10509.92-27E539.38
vagina, adult.CNhs10502.89-27D5102.04
vesicular gland, adult.CNhs10491.51-27F830.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I833.63
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H235.17
whole body, embryo E14.5.CNhs10578.420-27D255.19
whole body, embryo E14.CNhs10519.395-14B161.63
whole body, embryo E16.CNhs10514.453-14F2181.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5174.02
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5158.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5163.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5173.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5165.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5179.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5168.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5153.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5158.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5175.75
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5177.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5161.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5176.78
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5165.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5190.98
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5183.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5169.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5177.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5169.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5181.50
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5165.92
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5197.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5167.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5172.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5175.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5173.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5200.52
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5184.06
whole body, embryo E17.5.CNhs10513.490-9F9122.69
whole body, embryo E17.CNhs10517.475-3I546.71
whole body, embryo E18.CNhs10516.493-3B3155.80
whole body, neonate N00.CNhs10525.657-19C2152.34
whole body, neonate N01.CNhs10576.659-23C6224.76
whole body, neonate N06.CNhs10515.692-21D1205.15
whole body, neonate N10.CNhs10518.761-6B4267.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.29e-0725

Uber anatomy
Ontology termp-valuen
epithelial tube1.23e-1247
digestive tract diverticulum3.48e-0923
sac3.48e-0923
exocrine gland5.22e-0925
exocrine system5.22e-0925
liver6.22e-0922
epithelial sac6.22e-0922
digestive gland6.22e-0922
epithelium of foregut-midgut junction6.22e-0922
anatomical boundary6.22e-0922
hepatobiliary system6.22e-0922
foregut-midgut junction6.22e-0922
hepatic diverticulum6.22e-0922
liver primordium6.22e-0922
septum transversum6.22e-0922
liver bud6.22e-0922
digestive system2.60e-07116
digestive tract2.60e-07116
primitive gut2.60e-07116
endoderm-derived structure4.16e-07118
endoderm4.16e-07118
presumptive endoderm4.16e-07118
intestine4.93e-0731
subdivision of digestive tract7.39e-07114
mesenchyme7.56e-0761
entire embryonic mesenchyme7.56e-0761
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