FFCP PHASE1:Mm9::chr11:115024731..115024733,+: Difference between revisions
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{{FFCP|EntrezGene=26941|HGNC=|MCL_coexpression_id=24|UniProt=P70441,Q3TG37|association_with_transcript=76bp_to_ENSMUST00000021077,NM_012030,uc007mgp.1_5end|description=CAGE_peak_5_at_Slc9a3r1_5end|id=chr11:115024731..115024733,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,9.30e-10,6;CL:0000677,9.30e-10,6;CL:0000584,9.30e-10,6;CL:0000075,2.71e-08,7;CL:0000682,5.00e-08,3;CL:0000066,1.69e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.04e-17!128;UBERON:0001555!3.04e-17!128;UBERON:0007026!3.04e-17!128;UBERON:0004119!3.76e-17!130;UBERON:0000925!3.76e-17!130;UBERON:0006595!3.76e-17!130;UBERON:0004921!4.71e-16!126;UBERON:0004185!4.71e-16!126;UBERON:0003929!2.16e-10!55;UBERON:0000160!4.39e-10!43;UBERON:0000344!1.37e-09!15;UBERON:0005911!1.54e-09!69;UBERON:0005409!1.70e-09!59;UBERON:0000490!1.66e-08!66;UBERON:0001242!2.91e-08!13;UBERON:0000060!2.91e-08!13;UBERON:0001262!2.91e-08!13;UBERON:0004786!2.91e-08!13;UBERON:0004923!6.51e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-17,31;UBERON:0000344,1.31e-16,15;UBERON:0001242,4.45e-13,13;UBERON:0001262,4.45e-13,13;UBERON:0004786,4.45e-13,13;UBERON:0005409,7.34e-10,47;UBERON:0002108,1.42e-09,4;UBERON:0004923,1.96e-09,24;UBERON:0001007,2.28e-08,116;UBERON:0001555,2.28e-08,116;UBERON:0007026,2.28e-08,116;UBERON:0004119,4.08e-08,118;UBERON:0000925,4.08e-08,118;UBERON:0006595,4.08e-08,118;UBERON:0000331,8.39e-08,3;UBERON:0002116,8.39e-08,3;UBERON:0001204,8.39e-08,3;UBERON:0001168,8.39e-08,3;UBERON:0004921,6.08e-07,114|phase1_expression=0,7.32848356042658,9.09998478779072,3.0246421130683,9.01612313903425,1.00727563147134,0.700837921786577,1.03298658753261,1.68946466582,1.87251621057595,0,0.0797721589953364,0.856003649656029,0,0,0,0,0.157731082679119,0,0.84877930359606,0.595303031057488,0.297872853602656,0,1.75991665072747,2.2940928106717,6.89078356938024,3.01533397311352,3.66301095566011,3.99049180858385,2.77233142735924,2.88249663851896,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0.837063261473815,0.7813353445238,0,1.17646297606203,3.41522742479223,0,0,0,0.367093504323363,0,0,0.439372365468944,0.972149495371417,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,0,1.72084775396277,4.75979933595425,0.539703191637817,0.649776417447669,1.34408066129201,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,1.02765491747154,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0.741584903203122,0.144599356919912,0,0,0,0,0,0,0.41889341362691,3.0654846625031,0.479260498023681,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,1.85115396664481,0,0,0.128867461322093,0.80673409849337,0.22237804384487,1.90225626112559,0.474529061544512,1.64698954724011,1.75934646160189,2.18852119245266,0.779856348476481,0.898819408654221,0.864552199498777,1.1948476395262,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.420814919341911,0.316182685621286,0.295220295959204,0.470996183524124,0.370191491765402,1.1858105083486,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.717589654087649,1.92977408545347,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.29214146584111,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,1.7488850197791,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0,0,1.01987057996313,1.81936888020755,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.777689839750757,0,2.81846469342095,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,1.44015003128933,1.26404448251271,0.810900861160657,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.886137163047463,0.201932899896295,0.609654453239999,0.403304740547362,0.682205165178267,0.384847366561318,0.350630706544707,0.226730383615211,0.443971906748129,0.358855426437903,0.503653849092235,0,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.548783918618318,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.463735671240843|short_description=p5@Slc9a3r1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26941 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P70441,uniprot:Q3TG37 | |||
|association_with_transcript=76bp_to_ENSMUST00000021077,NM_012030,uc007mgp.1_5end | |||
|cluster_id=chr11:115024731..115024733,+ | |||
|description=CAGE_peak_5_at_Slc9a3r1_5end | |||
|id=chr11:115024731..115024733,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.30e-10,6;CL:0000677,9.30e-10,6;CL:0000584,9.30e-10,6;CL:0000075,2.71e-08,7;CL:0000682,5.00e-08,3;CL:0000066,1.69e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.04e-17!128;UBERON:0001555!3.04e-17!128;UBERON:0007026!3.04e-17!128;UBERON:0004119!3.76e-17!130;UBERON:0000925!3.76e-17!130;UBERON:0006595!3.76e-17!130;UBERON:0004921!4.71e-16!126;UBERON:0004185!4.71e-16!126;UBERON:0003929!2.16e-10!55;UBERON:0000160!4.39e-10!43;UBERON:0000344!1.37e-09!15;UBERON:0005911!1.54e-09!69;UBERON:0005409!1.70e-09!59;UBERON:0000490!1.66e-08!66;UBERON:0001242!2.91e-08!13;UBERON:0000060!2.91e-08!13;UBERON:0001262!2.91e-08!13;UBERON:0004786!2.91e-08!13;UBERON:0004923!6.51e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-17,31;UBERON:0000344,1.31e-16,15;UBERON:0001242,4.45e-13,13;UBERON:0001262,4.45e-13,13;UBERON:0004786,4.45e-13,13;UBERON:0005409,7.34e-10,47;UBERON:0002108,1.42e-09,4;UBERON:0004923,1.96e-09,24;UBERON:0001007,2.28e-08,116;UBERON:0001555,2.28e-08,116;UBERON:0007026,2.28e-08,116;UBERON:0004119,4.08e-08,118;UBERON:0000925,4.08e-08,118;UBERON:0006595,4.08e-08,118;UBERON:0000331,8.39e-08,3;UBERON:0002116,8.39e-08,3;UBERON:0001204,8.39e-08,3;UBERON:0001168,8.39e-08,3;UBERON:0004921,6.08e-07,114 | |||
|phase1_expression=0,7.32848356042658,9.09998478779072,3.0246421130683,9.01612313903425,1.00727563147134,0.700837921786577,1.03298658753261,1.68946466582,1.87251621057595,0,0.0797721589953364,0.856003649656029,0,0,0,0,0.157731082679119,0,0.84877930359606,0.595303031057488,0.297872853602656,0,1.75991665072747,2.2940928106717,6.89078356938024,3.01533397311352,3.66301095566011,3.99049180858385,2.77233142735924,2.88249663851896,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0.837063261473815,0.7813353445238,0,1.17646297606203,3.41522742479223,0,0,0,0.367093504323363,0,0,0.439372365468944,0.972149495371417,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,0,1.72084775396277,4.75979933595425,0.539703191637817,0.649776417447669,1.34408066129201,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,1.02765491747154,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0.741584903203122,0.144599356919912,0,0,0,0,0,0,0.41889341362691,3.0654846625031,0.479260498023681,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,1.85115396664481,0,0,0.128867461322093,0.80673409849337,0.22237804384487,1.90225626112559,0.474529061544512,1.64698954724011,1.75934646160189,2.18852119245266,0.779856348476481,0.898819408654221,0.864552199498777,1.1948476395262,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.420814919341911,0.316182685621286,0.295220295959204,0.470996183524124,0.370191491765402,1.1858105083486,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.717589654087649,1.92977408545347,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.29214146584111,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,1.7488850197791,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0,0,1.01987057996313,1.81936888020755,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.777689839750757,0,2.81846469342095,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,1.44015003128933,1.26404448251271,0.810900861160657,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.886137163047463,0.201932899896295,0.609654453239999,0.403304740547362,0.682205165178267,0.384847366561318,0.350630706544707,0.226730383615211,0.443971906748129,0.358855426437903,0.503653849092235,0,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.548783918618318,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.463735671240843 | |||
|short_description=p5@Slc9a3r1 | |||
}} |
Revision as of 10:38, 5 August 2015
Short description: | p5@Slc9a3r1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc9a3r1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 76bp_to_ENSMUST00000021077, NM_012030, uc007mgp.1_5end |
EntrezGene: | 26941 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.30e-10 | 6 |
gut absorptive cell | 9.30e-10 | 6 |
enterocyte | 9.30e-10 | 6 |
columnar/cuboidal epithelial cell | 2.71e-08 | 7 |
M cell of gut | 5.00e-08 | 3 |
epithelial cell | 1.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.01e-17 | 31 |
mucosa | 1.31e-16 | 15 |
intestinal mucosa | 4.45e-13 | 13 |
wall of intestine | 4.45e-13 | 13 |
gastrointestinal system mucosa | 4.45e-13 | 13 |
gastrointestinal system | 7.34e-10 | 47 |
small intestine | 1.42e-09 | 4 |
organ component layer | 1.96e-09 | 24 |
digestive system | 2.28e-08 | 116 |
digestive tract | 2.28e-08 | 116 |
primitive gut | 2.28e-08 | 116 |
endoderm-derived structure | 4.08e-08 | 118 |
endoderm | 4.08e-08 | 118 |
presumptive endoderm | 4.08e-08 | 118 |
ileal mucosa | 8.39e-08 | 3 |
ileum | 8.39e-08 | 3 |
mucosa of small intestine | 8.39e-08 | 3 |
wall of small intestine | 8.39e-08 | 3 |
subdivision of digestive tract | 6.08e-07 | 114 |