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FFCP PHASE1:Mm9::chr6:34659473..34659497,+: Difference between revisions

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{{FFCP|EntrezGene=109624|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000149009_5end|description=CAGE_peak_2_at_Cald1_5end|id=chr6:34659473..34659497,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.04e-12!22;UBERON:0007499!5.04e-12!22;UBERON:0006925!5.04e-12!22;UBERON:0009497!5.04e-12!22;UBERON:0000015!5.04e-12!22;UBERON:0002423!5.04e-12!22;UBERON:0006235!5.04e-12!22;UBERON:0008835!5.04e-12!22;UBERON:0003894!5.04e-12!22;UBERON:0004161!5.04e-12!22;UBERON:0008836!5.04e-12!22;UBERON:0002365!1.98e-11!25;UBERON:0002330!1.98e-11!25;UBERON:0009854!5.23e-11!23;UBERON:0009856!5.23e-11!23;UBERON:0003914!6.77e-10!47;UBERON:0005256!3.89e-08!47;UBERON:0000468!4.02e-08!333;UBERON:0000466!1.36e-07!79;UBERON:0009569!1.82e-07!66;UBERON:0000922!6.27e-07!328;UBERON:0002100!9.11e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.81e-12,22;UBERON:0007499,4.81e-12,22;UBERON:0006925,4.81e-12,22;UBERON:0009497,4.81e-12,22;UBERON:0000015,4.81e-12,22;UBERON:0002423,4.81e-12,22;UBERON:0006235,4.81e-12,22;UBERON:0008835,4.81e-12,22;UBERON:0003894,4.81e-12,22;UBERON:0004161,4.81e-12,22;UBERON:0008836,4.81e-12,22;UBERON:0002365,1.90e-11,25;UBERON:0002330,1.90e-11,25;UBERON:0009854,5.01e-11,23;UBERON:0009856,5.01e-11,23;UBERON:0003914,6.51e-10,47;UBERON:0005256,8.22e-09,45;UBERON:0002100,8.38e-09,90;UBERON:0005177,1.81e-08,79;UBERON:0009569,1.77e-07,66|phase1_expression=16.0148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0,0.42438965179803,11.3958008802433,0.0992909512008853,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.5994167090804,64.9826129117088,49.9247165879774,17.9950009200049,7.84890562969608,28.9985761209503,37.719400420411,29.9570942278276,20.125359011096,0,0,0,66.3729344972743,48.9972182295274,33.0030139057563,4.85559506063035,6.34789175126439,5.70448263155561,32.8679196107058,23.1216646988896,2.2497492932035,0.988866362566974,2.1314403448383,7.19040265244171,9.22123932771731,9.02099627083756,7.2903206699113,9.04397333810943,1.71390590642282,3.09215957332259,6.36952155917761,9.00947427571422,3.67687514644008,4.40463523997555,6.38436690425939,6.60508093001847,7.78129097608144,7.31901148819277,6.77187381723788,7.53794097303729,5.6276261003168,8.70950012327818,5.30331453852602,7.54569908235246,4.84638559145781,14.0093457666391,58.1901012822249,37.3925190425164,68.8339101585109,44.1981366910038,106.861231944288,87.7198163554353,77.5086514678391,48.8746582058496,23.3489541931939,16.8860902991865,13.7802434059033,6.05626705039726,25.6652954828636,12.7402619853323,14.2213340630666,10.6080610095495,14.6948721975557,13.6491600153991,43.9607936918381,27.7063535502474,14.398887489288,25.502343034622,20.7036525252256,17.0655467969483,17.7852715852095,21.518733405834,13.1949920896159,25.2138867089061,29.7874675255018,1.76922110389975,20.0590893934787,7.28777010919299,7.75800405016355,3.72783522436244,32.2058876712702,21.7824575085993,4.85368404896324,0,0,0,10.6351353977424,9.15001205637253,7.03664371832041,7.99591872884472,5.62574006126727,10.1816141834184,7.46309810111685,26.4782346010822,10.8234064430781,2.52722758433675,49.0329524215484,45.672275479909,18.8519725635448,41.0541655956196,29.086029842293,31.2287531104595,35.8718416797579,37.3869880993318,38.0293954986353,23.281343236747,42.1706558774237,48.3865591450859,36.1672958505498,37.5363786454557,40.0489991500492,30.2499740519677,31.2483798905034,0,0,0,14.7059298500206,19.465662978431,14.2249028554202,19.4130683179872,16.1346670032871,15.8895126274,16.7424440220294,15.0233104783787,13.778310399326,13.9875872426458,15.9242440156722,16.2137619091711,11.8421989814519,21.9550115291051,21.4730270016595,21.449574753541,17.5966887168576,2.64335026387038,3.96675849995316,27.9407608201156,17.6499870613933,16.8816374331942,11.8993279527772,12.008414367623,8.94060442729028,5.21981967698963,6.58795818896044,7.79139147280835,9.35095418593409,9.74820435595601,6.29173586057955,8.42938394511308,8.96135729644652,17.6391147886366,21.9357144210679,37.1935527721165,17.514014194697,14.3524840504043,17.8846340720312,13.7855650930881,6.4948465111025,5.96595165797224,4.81248939295022,71.1486305009157,22.8577794831049,24.9629923793768,29.4569367224158,37.7319825782615,44.8589517139495,58.3093200579451,88.8981064723005,80.0948020268675,79.0736869981675,225.716084247947,129.877190736308,121.07061716845,120.985282536667,148.541058396143,101.313139486307,34.1793401808219,26.7182890596384,36.0152597936877,28.856664581782,24.1730955737157,23.4508760418542,21.9000149615133,21.8549685600735,56.906287022335,65.3320834463886,62.3468145450775,38.0162890140512,35.4004212825086,45.5644534531761,0,0,14.2611639175521,14.9005843004556,13.6468001489623,10.9006868530749,110.164283293126,13.3809591418318,37.5454781105345,42.167384384037,46.7468773080174,63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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:109624
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000149009_5end
|cluster_id=chr6:34659473..34659497,+
|description=CAGE_peak_2_at_Cald1_5end
|id=chr6:34659473..34659497,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!5.04e-12!22;UBERON:0007499!5.04e-12!22;UBERON:0006925!5.04e-12!22;UBERON:0009497!5.04e-12!22;UBERON:0000015!5.04e-12!22;UBERON:0002423!5.04e-12!22;UBERON:0006235!5.04e-12!22;UBERON:0008835!5.04e-12!22;UBERON:0003894!5.04e-12!22;UBERON:0004161!5.04e-12!22;UBERON:0008836!5.04e-12!22;UBERON:0002365!1.98e-11!25;UBERON:0002330!1.98e-11!25;UBERON:0009854!5.23e-11!23;UBERON:0009856!5.23e-11!23;UBERON:0003914!6.77e-10!47;UBERON:0005256!3.89e-08!47;UBERON:0000468!4.02e-08!333;UBERON:0000466!1.36e-07!79;UBERON:0009569!1.82e-07!66;UBERON:0000922!6.27e-07!328;UBERON:0002100!9.11e-07!98
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.81e-12,22;UBERON:0007499,4.81e-12,22;UBERON:0006925,4.81e-12,22;UBERON:0009497,4.81e-12,22;UBERON:0000015,4.81e-12,22;UBERON:0002423,4.81e-12,22;UBERON:0006235,4.81e-12,22;UBERON:0008835,4.81e-12,22;UBERON:0003894,4.81e-12,22;UBERON:0004161,4.81e-12,22;UBERON:0008836,4.81e-12,22;UBERON:0002365,1.90e-11,25;UBERON:0002330,1.90e-11,25;UBERON:0009854,5.01e-11,23;UBERON:0009856,5.01e-11,23;UBERON:0003914,6.51e-10,47;UBERON:0005256,8.22e-09,45;UBERON:0002100,8.38e-09,90;UBERON:0005177,1.81e-08,79;UBERON:0009569,1.77e-07,66
|phase1_expression=16.0148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0,0.42438965179803,11.3958008802433,0.0992909512008853,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.5994167090804,64.9826129117088,49.9247165879774,17.9950009200049,7.84890562969608,28.9985761209503,37.719400420411,29.9570942278276,20.125359011096,0,0,0,66.3729344972743,48.9972182295274,33.0030139057563,4.85559506063035,6.34789175126439,5.70448263155561,32.8679196107058,23.1216646988896,2.2497492932035,0.988866362566974,2.1314403448383,7.19040265244171,9.22123932771731,9.02099627083756,7.2903206699113,9.04397333810943,1.71390590642282,3.09215957332259,6.36952155917761,9.00947427571422,3.67687514644008,4.40463523997555,6.38436690425939,6.60508093001847,7.78129097608144,7.31901148819277,6.77187381723788,7.53794097303729,5.6276261003168,8.70950012327818,5.30331453852602,7.54569908235246,4.84638559145781,14.0093457666391,58.1901012822249,37.3925190425164,68.8339101585109,44.1981366910038,106.861231944288,87.7198163554353,77.5086514678391,48.8746582058496,23.3489541931939,16.8860902991865,13.7802434059033,6.05626705039726,25.6652954828636,12.7402619853323,14.2213340630666,10.6080610095495,14.6948721975557,13.6491600153991,43.9607936918381,27.7063535502474,14.398887489288,25.502343034622,20.7036525252256,17.0655467969483,17.7852715852095,21.518733405834,13.1949920896159,25.2138867089061,29.7874675255018,1.76922110389975,20.0590893934787,7.28777010919299,7.75800405016355,3.72783522436244,32.2058876712702,21.7824575085993,4.85368404896324,0,0,0,10.6351353977424,9.15001205637253,7.03664371832041,7.99591872884472,5.62574006126727,10.1816141834184,7.46309810111685,26.4782346010822,10.8234064430781,2.52722758433675,49.0329524215484,45.672275479909,18.8519725635448,41.0541655956196,29.086029842293,31.2287531104595,35.8718416797579,37.3869880993318,38.0293954986353,23.281343236747,42.1706558774237,48.3865591450859,36.1672958505498,37.5363786454557,40.0489991500492,30.2499740519677,31.2483798905034,0,0,0,14.7059298500206,19.465662978431,14.2249028554202,19.4130683179872,16.1346670032871,15.8895126274,16.7424440220294,15.0233104783787,13.778310399326,13.9875872426458,15.9242440156722,16.2137619091711,11.8421989814519,21.9550115291051,21.4730270016595,21.449574753541,17.5966887168576,2.64335026387038,3.96675849995316,27.9407608201156,17.6499870613933,16.8816374331942,11.8993279527772,12.008414367623,8.94060442729028,5.21981967698963,6.58795818896044,7.79139147280835,9.35095418593409,9.74820435595601,6.29173586057955,8.42938394511308,8.96135729644652,17.6391147886366,21.9357144210679,37.1935527721165,17.514014194697,14.3524840504043,17.8846340720312,13.7855650930881,6.4948465111025,5.96595165797224,4.81248939295022,71.1486305009157,22.8577794831049,24.9629923793768,29.4569367224158,37.7319825782615,44.8589517139495,58.3093200579451,88.8981064723005,80.0948020268675,79.0736869981675,225.716084247947,129.877190736308,121.07061716845,120.985282536667,148.541058396143,101.313139486307,34.1793401808219,26.7182890596384,36.0152597936877,28.856664581782,24.1730955737157,23.4508760418542,21.9000149615133,21.8549685600735,56.906287022335,65.3320834463886,62.3468145450775,38.0162890140512,35.4004212825086,45.5644534531761,0,0,14.2611639175521,14.9005843004556,13.6468001489623,10.9006868530749,110.164283293126,13.3809591418318,37.5454781105345,42.167384384037,46.7468773080174,63.3267314574263,62.6064274171527,57.464535750133,54.2446340244358,60.2047067297302,56.1308644684063,7.39039027770156,17.1747503102005,19.7652820070653,23.7814960656221,25.4053989377705,67.7000205533811,25.734747432428,16.0231485191318,25.4616857670462,17.7181135728464,25.8245524272899,24.2922595578128,17.4496190149203,23.5288269733916,15.1697643809192,26.3546521437497,21.6584640821192,35.0652793926402,30.6103859853227,16.2991941566271,18.4329850127169,47.349842382487,46.9109990293446,46.238274789196,14.3098526083862,60.3106289723736,60.5839722670526,8.38007912608855,57.0506435177521,50.3769011291225,47.1043943688897,37.2441713289786,42.3483521342258,11.9507143018239,10.7546675166096,4.61351378154202,16.9237231729842,7.9633646768976,2.44878994106098,1.91371918809435,2.74533807847827,0.169978429993855,0.139951452323658,0,21.0027535963325,23.408863525004,18.2987520414164,11.8805874903981,14.2180041289839,12.6650286972783,12.9469772529428,23.3909279702701,12.0407733312654,8.94343315713371,38.5230374113894,0,31.6975077613235,18.5313509311949,16.139448632556,14.7242198764613,13.8544022902438,12.7919390123872,11.4579858662676,5.55754525456268,0.483168241652012,2.59227005632079,1.89606672376907,16.8261928690836,16.5364641035372,9.87398254631242,8.23522800070415,5.96044064343795,2.64429988943931,2.65841148914239,2.72609414859999,1.5241361331,1.41156659191577,1.07203668813728,1.25075394132428,0.935015217452552,21.3126560598299,78.805013447793,141.568465729753,110.971731416656,33.8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|short_description=p2@Cald1
}}

Revision as of 14:38, 5 August 2015

Short description:p2@Cald1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cald1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000149009_5end
EntrezGene:109624
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Cald1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D866.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D964.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B349.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C337.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C166.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E149.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C632.87
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D914.01
Mouse Schwann, donor2.CNhs12573.11746-123F958.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F768.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C8106.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F487.72
Mouse hepatocyte, donor8.CNhs13091.11824-124F677.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A748.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.96
accessory axillary lymph node, adult.CNhs10475.1063-29H927.71
adrenal gland, adult.CNhs10508.49-24D714.40
adrenal gland, embryo E14.CNhs11038.406-44C525.50
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I117.07
adrenal gland, embryo E18.CNhs11026.1262-18F517.79
adrenal gland, neonate N00.CNhs11191.1311-23C121.52
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A825.21
aorta, adult.CNhs10498.46-23H129.79
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F520.06
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I221.78
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.82
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G449.03
eyeball, embryo E12.CNhs11016.345-16C645.67
eyeball, embryo E14.CNhs10521.399-16E218.85
eyeball, embryo E15.CNhs10593.426-16C941.05
eyeball, embryo E17.CNhs11023.1261-18D429.09
eyeball, neonate N00.CNhs11207.633-15C631.23
eyeball, neonate N01.CNhs11140.1532-43E735.87
eyeball, neonate N02.CNhs11205.1551-44G837.39
eyeball, neonate N16.CNhs11188.777-19A238.03
forelimb, embryo E11.CNhs10596.335-25E223.28
forelimb, embryo E12.CNhs10600.359-14H242.17
forelimb, embryo E13.CNhs10589.384-1E248.39
forelimb, embryo E14.CNhs10577.413-26A836.17
forelimb, embryo E15.CNhs11007.437-20E737.54
forelimb, embryo E17.CNhs10598.1517-43C440.05
forelimb, embryo E18.CNhs11008.1520-43B530.25
gonad, embryo E13.CNhs11044.1564-45I631.25
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E914.71
heart, embryo E12.CNhs11015.353-12F519.47
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C615.89
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E313.78
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G115.92
heart, neonate N16.CNhs11209.782-15G116.21
heart, neonate N20.CNhs11127.821-26I611.84
heart, neonate N25.CNhs11196.1351-25D321.96
heart, neonate N30.CNhs11202.1390-42D221.47
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I527.94
intestine, embryo E13.CNhs11010.381-16D517.65
intestine, embryo E15.CNhs10602.976-16D816.88
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I917.64
kidney, embryo E15.CNhs10997.434-16F821.94
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C714.35
kidney, neonate N00.CNhs11214.646-21G717.88
kidney, neonate N10.CNhs11206.758-6D513.79
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B271.15
liver, embryo E12.CNhs10601.355-15F822.86
liver, embryo E13.CNhs10524.378-3H624.96
liver, embryo E14.CNhs10594.409-16E129.46
liver, embryo E15.CNhs10520.433-16D737.73
liver, embryo E16.CNhs10523.462-17F544.86
liver, embryo E17.CNhs10510.481-18A358.31
liver, embryo E18.CNhs10579.499-43G488.90
liver, neonate N00.CNhs11117.641-24F480.09
liver, neonate N03.CNhs11123.1345-25G279.07
liver, neonate N06.CNhs11101.684-20A8225.72
liver, neonate N07.CNhs11103.716-20H2129.88
liver, neonate N10.CNhs11115.751-24B9121.07
liver, neonate N20.CNhs11220.823-25A3120.99
liver, neonate N25.CNhs11198.1368-26H1148.54
liver, neonate N30.CNhs11106.1382-42D1101.31
lung, adult.CNhs10474.28-22B134.18
lung, embryo E12.CNhs10522.354-16G226.72
lung, embryo E14.CNhs10604.404-26F836.02
lung, embryo E15.CNhs11020.432-17C528.86
lung, embryo E16.CNhs10998.458-17B624.17
lung, embryo E17.CNhs10605.480-44A623.45
lung, embryo E18.CNhs10583.1287-20I621.90
lung, neonate N00.CNhs11224.640-42C621.85
lung, neonate N06.CNhs11212.683-20E556.91
lung, neonate N07.CNhs11111.715-19A365.33
lung, neonate N10.CNhs11219.750-23E662.35
lung, neonate N20.CNhs11109.822-18A438.02
lung, neonate N25.CNhs11119.1359-25C735.40
lung, neonate N30.CNhs11133.1394-42H245.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H214.90
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7110.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E137.55
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E346.75
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D763.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D862.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D957.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D454.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D560.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D656.13
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H719.77
ovary, neonate N00.CNhs11217.1299-22I423.78
oviduct, adult pregnant day01.CNhs10500.988-6G625.41
pancreas, adult.CNhs10486.34-16E467.70
pancreas, embryo E14.CNhs11012.405-44F425.73
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E525.46
pancreas, embryo E17.CNhs10599.1558-45G317.72
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G924.29
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G835.07
pituitary gland, embryo E12.CNhs11018.346-16E630.61
pituitary gland, embryo E13.CNhs11009.370-44C716.30
pituitary gland, embryo E14.CNhs11037.398-44A518.43
pituitary gland, embryo E15.CNhs10592.427-16B947.35
pituitary gland, embryo E16.CNhs11036.449-43F646.91
pituitary gland, embryo E17.CNhs11039.1265-44F546.24
pituitary gland, neonate N00.CNhs11190.1308-22E914.31
placenta, adult pregnant day10.CNhs10472.539-13I760.31
placenta, adult pregnant day17.CNhs10464.577-18G360.58
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C357.05
skin, neonate N00.CNhs11124.650-25G450.38
skin, neonate N03.CNhs11215.662-22H347.10
skin, neonate N06.CNhs11097.693-20I537.24
skin, neonate N10.CNhs11108.762-6C442.35
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E323.41
stomach, embryo E15.CNhs10603.1252-16G818.30
stomach, embryo E16.CNhs11022.459-17D411.88
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A923.39
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I18.94
submandibular gland, adult.CNhs10469.59-29C138.52
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F531.70
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I514.72
testis, embryo E18.CNhs11027.503-18G513.85
testis, neonate N00.CNhs11189.1300-22B712.79
testis, neonate N07.CNhs11222.726-26I411.46
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I416.83
thymus, embryo E15.CNhs11005.430-45I216.54
thymus, embryo E16.CNhs11002.456-26C59.87
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B421.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H378.81
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7141.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5110.97
urinary bladder, adult.CNhs10481.879-12E433.81
uterus, adult pregnant day19.CNhs10497.590-15F539.41
uterus, adult.CNhs10509.92-27E534.98
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I836.43
whole body, embryo E12.CNhs10587.857-27C939.10
whole body, embryo E13.CNhs10512.372-23H229.71
whole body, embryo E14.5.CNhs10578.420-27D230.63
whole body, embryo E14.CNhs10519.395-14B136.68
whole body, embryo E16.CNhs10514.453-14F236.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G536.75
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.66
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.13
whole body, embryo E17.5.CNhs10513.490-9F925.85
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B329.94
whole body, neonate N00.CNhs10525.657-19C228.79
whole body, neonate N01.CNhs10576.659-23C627.16
whole body, neonate N06.CNhs10515.692-21D117.21
whole body, neonate N10.CNhs10518.761-6B421.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver4.81e-1222
epithelial sac4.81e-1222
digestive gland4.81e-1222
epithelium of foregut-midgut junction4.81e-1222
anatomical boundary4.81e-1222
hepatobiliary system4.81e-1222
foregut-midgut junction4.81e-1222
hepatic diverticulum4.81e-1222
liver primordium4.81e-1222
septum transversum4.81e-1222
liver bud4.81e-1222
exocrine gland1.90e-1125
exocrine system1.90e-1125
digestive tract diverticulum5.01e-1123
sac5.01e-1123
epithelial tube6.51e-1047
trunk mesenchyme8.22e-0945
trunk8.38e-0990
trunk region element1.81e-0879
subdivision of trunk1.77e-0766
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