FFCP PHASE1:Mm9::chr6:47763513..47763527,-: Difference between revisions
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{{FFCP|EntrezGene=12304|HGNC=|MCL_coexpression_id=27|UniProt=P08003|association_with_transcript=-2bp_to_ENSMUST00000077290,NM_009787,uc009btf.1_5end|description=CAGE_peak_3_at_Pdia4_5end|id=chr6:47763513..47763527,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!9.24e-10!79;UBERON:0004119!1.68e-09!130;UBERON:0000925!1.68e-09!130;UBERON:0006595!1.68e-09!130;UBERON:0001007!8.89e-09!128;UBERON:0001555!8.89e-09!128;UBERON:0007026!8.89e-09!128;UBERON:0002107!1.17e-08!22;UBERON:0007499!1.17e-08!22;UBERON:0006925!1.17e-08!22;UBERON:0009497!1.17e-08!22;UBERON:0000015!1.17e-08!22;UBERON:0002423!1.17e-08!22;UBERON:0006235!1.17e-08!22;UBERON:0008835!1.17e-08!22;UBERON:0003894!1.17e-08!22;UBERON:0004161!1.17e-08!22;UBERON:0008836!1.17e-08!22;UBERON:0002365!1.96e-08!25;UBERON:0002330!1.96e-08!25;UBERON:0004921!4.65e-08!126;UBERON:0004185!4.65e-08!126;UBERON:0009854!1.51e-07!23;UBERON:0009856!1.51e-07!23;UBERON:0000926!3.42e-07!193;UBERON:0004120!3.42e-07!193;UBERON:0006603!3.42e-07!193;UBERON:0005256!3.82e-07!47;UBERON:0005409!5.38e-07!59;UBERON:0000077!8.06e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.41e-09,22;UBERON:0007499,7.41e-09,22;UBERON:0006925,7.41e-09,22;UBERON:0009497,7.41e-09,22;UBERON:0000015,7.41e-09,22;UBERON:0002423,7.41e-09,22;UBERON:0006235,7.41e-09,22;UBERON:0008835,7.41e-09,22;UBERON:0003894,7.41e-09,22;UBERON:0004161,7.41e-09,22;UBERON:0008836,7.41e-09,22;UBERON:0002365,1.38e-08,25;UBERON:0002330,1.38e-08,25;UBERON:0009854,6.32e-08,23;UBERON:0009856,6.32e-08,23;UBERON:0005256,6.39e-07,45;UBERON:0002100,8.66e-07,90|phase1_expression=3.20297694209588,4.18770489167233,1.36499771816861,2.41971369045464,1.00179145989269,6.21153306073992,5.13947809310157,0.774739940649458,1.267098499365,3.27690336850791,0.68487187290202,1.35612670292072,0.171200729931206,0.262261207256992,7.32841475994458,2.63217847606774,2.09868563438444,4.88966356305268,4.52477630898938,5.51706547337439,3.91199134694921,1.19149141441062,2.35079810225042,9.75953779039781,8.25873411841812,1.72269589234506,2.15380998079537,3.878482188346,1.14014051673824,2.01624103807945,2.21730510655305,0.635030673459631,1.84519436275371,0,1.73310971850765,1.16364251750945,1.83752420636132,0,0,0.523523743973798,0,0,0,4.15459499319405,4.1564541800001,1.46837401729345,2.34717403304412,4.79655344036982,6.15121311656521,9.72149495371417,2.65974201088189,2.87505128729943,3.02008690903925,1.45072428402269,0.336093799142464,5.91696702882678,1.71920063963254,7.73508138416164,1.21389876515759,0.528990979272033,1.90149421051854,2.03306719241479,4.4464739805557,1.3498495759221,1.97773272513395,0.7104801149461,5.09320187881288,11.5265491596466,1.24427534770173,0.540023753326763,1.05162480675691,0,1.10434270475807,0.734944795289724,1.0543001812006,0,1.10115880999389,0.255374676170375,0.768032666281217,0.395658863190582,0.823388792421687,1.56274011167028,0.279182999001381,1.12552522006336,1.37518422999129,0.883885756421003,1.28134512719193,1.3047961207771,3.7863096666592,3.02286240427142,1.44932244350839,24.0918685554788,3.39985666853875,32.9218946899068,47.4336784736798,10.3046184032387,17.4151080963372,1.53387290320252,0.519572009205738,0.35333957451034,10.563256483251,0,2.54805239706646,0,0.216491041011214,1.26679932737549,2.02209778005913,10.5049169341535,32.3672354558965,1.03909497345377,2.94925055502431,0.913396434936424,1.61430848079241,0,0.470354828542819,1.50799909595611,8.40462890296871,1.3013942122792,1.76922110389975,0.647067399789637,1.98757366614354,1.45462575940567,0,0.585561594023094,0,4.59822699375465,0.359445373517761,0.599902730993408,0.381210681219194,1.3481157546434,1.37250180845588,0.125654352112864,1.04294592115366,0.255715457330331,1.0389402227978,0.324482526135515,0.305518091550949,4.35424397135326,21.4814344668623,0.631325567659422,1.95180664444056,2.29902104433473,1.98068342785884,0.753524089178575,0.748401490664606,0.2562274405697,0.843315521037559,0,2.80238390812695,3.59301552318857,1.93546236580344,2.41115305670332,0.834141747676794,0.348252166522167,1.23469281844766,3.78165106955137,0.702213187313235,2.57347907114715,1.98914449576915,2.89976081549703,0.938104239924385,2.52086886045421,1.42046841351126,0.590292695242212,2.00547246753592,0.232533944750408,1.3413670069981,0.350296027101508,0.658239399653922,0.164167464079095,0.324275238183423,0.292399974850665,2.85415149878366,0,0.630869845692382,0.205809224758569,2.31293148088659,5.28901133327089,1.49301775374664,2.55460339046482,3.35055399437443,2.42020229548011,4.66993892074228,4.75564065281398,1.89811624617805,2.63518327558417,2.01068167040216,0.994782360205754,2.33956904542944,5.39291645192533,1.94524244887225,1.1948476395262,2.27601481143698,2.74196430263349,0,1.83286195060783,1.35766741017338,0.771494018793504,0.69560190836683,3.24742325555125,3.1399745568275,1.97435462274881,11.5616524563988,3.83743743147016,3.14494392181125,2.24862112384854,3.0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12304 | |||
|HGNC= | |||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P08003 | |||
|association_with_transcript=-2bp_to_ENSMUST00000077290,NM_009787,uc009btf.1_5end | |||
|cluster_id=chr6:47763513..47763527,- | |||
|description=CAGE_peak_3_at_Pdia4_5end | |||
|id=chr6:47763513..47763527,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!9.24e-10!79;UBERON:0004119!1.68e-09!130;UBERON:0000925!1.68e-09!130;UBERON:0006595!1.68e-09!130;UBERON:0001007!8.89e-09!128;UBERON:0001555!8.89e-09!128;UBERON:0007026!8.89e-09!128;UBERON:0002107!1.17e-08!22;UBERON:0007499!1.17e-08!22;UBERON:0006925!1.17e-08!22;UBERON:0009497!1.17e-08!22;UBERON:0000015!1.17e-08!22;UBERON:0002423!1.17e-08!22;UBERON:0006235!1.17e-08!22;UBERON:0008835!1.17e-08!22;UBERON:0003894!1.17e-08!22;UBERON:0004161!1.17e-08!22;UBERON:0008836!1.17e-08!22;UBERON:0002365!1.96e-08!25;UBERON:0002330!1.96e-08!25;UBERON:0004921!4.65e-08!126;UBERON:0004185!4.65e-08!126;UBERON:0009854!1.51e-07!23;UBERON:0009856!1.51e-07!23;UBERON:0000926!3.42e-07!193;UBERON:0004120!3.42e-07!193;UBERON:0006603!3.42e-07!193;UBERON:0005256!3.82e-07!47;UBERON:0005409!5.38e-07!59;UBERON:0000077!8.06e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.41e-09,22;UBERON:0007499,7.41e-09,22;UBERON:0006925,7.41e-09,22;UBERON:0009497,7.41e-09,22;UBERON:0000015,7.41e-09,22;UBERON:0002423,7.41e-09,22;UBERON:0006235,7.41e-09,22;UBERON:0008835,7.41e-09,22;UBERON:0003894,7.41e-09,22;UBERON:0004161,7.41e-09,22;UBERON:0008836,7.41e-09,22;UBERON:0002365,1.38e-08,25;UBERON:0002330,1.38e-08,25;UBERON:0009854,6.32e-08,23;UBERON:0009856,6.32e-08,23;UBERON:0005256,6.39e-07,45;UBERON:0002100,8.66e-07,90 | |||
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| |||
|short_description=p3@Pdia4 | |||
}} |
Revision as of 19:40, 5 August 2015
Short description: | p3@Pdia4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pdia4_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | -2bp_to_ENSMUST00000077290, NM_009787, uc009btf.1_5end |
EntrezGene: | 12304 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 7.41e-09 | 22 |
epithelial sac | 7.41e-09 | 22 |
digestive gland | 7.41e-09 | 22 |
epithelium of foregut-midgut junction | 7.41e-09 | 22 |
anatomical boundary | 7.41e-09 | 22 |
hepatobiliary system | 7.41e-09 | 22 |
foregut-midgut junction | 7.41e-09 | 22 |
hepatic diverticulum | 7.41e-09 | 22 |
liver primordium | 7.41e-09 | 22 |
septum transversum | 7.41e-09 | 22 |
liver bud | 7.41e-09 | 22 |
exocrine gland | 1.38e-08 | 25 |
exocrine system | 1.38e-08 | 25 |
digestive tract diverticulum | 6.32e-08 | 23 |
sac | 6.32e-08 | 23 |
trunk mesenchyme | 6.39e-07 | 45 |
trunk | 8.66e-07 | 90 |