FFCP PHASE1:Mm9::chr13:32305969..32305996,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2065|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:32305969..32305996,-|id=chr13:32305969..32305996,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000708,3.47e-13,2;CL:0000151,4.24e-09,3;CL:0000499,4.24e-09,3;CL:0000327,4.24e-09,3;CL:0002374,4.65e-08,1;CL:0000202,4.65e-08,1;CL:0000199,4.65e-08,1;CL:0000855,4.65e-08,1;CL:0000589,4.65e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.47e-16!63;UBERON:0003056!2.82e-14!49;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0001049!4.16e-11!52;UBERON:0005068!4.16e-11!52;UBERON:0006241!4.16e-11!52;UBERON:0007135!4.16e-11!52;UBERON:0002616!2.84e-10!49;UBERON:0001894!6.66e-10!10;UBERON:0006222!6.66e-10!10;UBERON:0000955!7.14e-10!50;UBERON:0006238!7.14e-10!50;UBERON:0007811!8.83e-10!86;UBERON:0000153!1.21e-09!94;UBERON:0004121!4.16e-09!102;UBERON:0000924!4.16e-09!102;UBERON:0006601!4.16e-09!102;UBERON:0003080!1.03e-08!40;UBERON:0000007!1.19e-08!8;UBERON:0003296!1.19e-08!8;UBERON:0010133!1.19e-08!8;UBERON:0001017!1.85e-08!73;UBERON:0005743!1.85e-08!73;UBERON:0002780!3.05e-08!39;UBERON:0001890!3.05e-08!39;UBERON:0006240!3.05e-08!39;UBERON:0000073!6.11e-08!75;UBERON:0001016!6.11e-08!75;UBERON:0000970!7.29e-08!9;UBERON:0000019!7.29e-08!9;UBERON:0000047!7.29e-08!9;UBERON:0004088!7.29e-08!9;UBERON:0002104!7.29e-08!9;UBERON:0001456!7.29e-08!9;UBERON:0003072!7.29e-08!9;UBERON:0003071!7.29e-08!9;UBERON:0004128!7.29e-08!9;UBERON:0001444!1.15e-07!11;UBERON:0000020!6.26e-07!12;UBERON:0001032!6.26e-07!12;UBERON:0004456!6.26e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.33e-20,8;UBERON:0003296,2.33e-20,8;UBERON:0010133,2.33e-20,8;UBERON:0001894,2.72e-16,10;UBERON:0006222,2.72e-16,10;UBERON:0003210,3.47e-13,2;UBERON:0000020,9.95e-09,12;UBERON:0001032,9.95e-09,12;UBERON:0004456,9.95e-09,12;UBERON:0000033,4.51e-08,13;UBERON:0005085,4.51e-08,13;UBERON:0003056,1.31e-07,49;UBERON:0000970,8.66e-07,9;UBERON:0000019,8.66e-07,9;UBERON:0000047,8.66e-07,9;UBERON:0010312,8.66e-07,9;UBERON:0004088,8.66e-07,9;UBERON:0002104,8.66e-07,9;UBERON:0001456,8.66e-07,9;UBERON:0003072,8.66e-07,9;UBERON:0004128,8.66e-07,9;UBERON:0003071,8.66e-07,9|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,0,0,0,0,0,0,0,0,0,0,1.35537812827653,1.77858959222228,0,0,0,0,1.15265491596466,0.311068836925433,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.307213066512487,0,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.811206315338788,0,0.124406970610093,0,0.210441855886474,2.60240885925407,1.83921683546778,0.180062129805349,1.65775299619287,0.612328492361951,0.768682321709099,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.06103859853227,0.517434735131018,2.7863814554107,4.43350584105684,2.67553226403106,3.62007845324666,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,2.79317411380722,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.754505365544305,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0,1.07435527024149,0.191288332068843,0,0.463735671240843|short_description=p@chr13:32305969..32305996,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2065 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:32305969..32305996,- | |||
|description=CAGE_peak_at_chr13:32305969..32305996,- | |||
|id=chr13:32305969..32305996,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,3.47e-13,2;CL:0000151,4.24e-09,3;CL:0000499,4.24e-09,3;CL:0000327,4.24e-09,3;CL:0002374,4.65e-08,1;CL:0000202,4.65e-08,1;CL:0000199,4.65e-08,1;CL:0000855,4.65e-08,1;CL:0000589,4.65e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.47e-16!63;UBERON:0003056!2.82e-14!49;UBERON:0002346!1.70e-12!71;UBERON:0003075!1.70e-12!71;UBERON:0007284!1.70e-12!71;UBERON:0001049!4.16e-11!52;UBERON:0005068!4.16e-11!52;UBERON:0006241!4.16e-11!52;UBERON:0007135!4.16e-11!52;UBERON:0002616!2.84e-10!49;UBERON:0001894!6.66e-10!10;UBERON:0006222!6.66e-10!10;UBERON:0000955!7.14e-10!50;UBERON:0006238!7.14e-10!50;UBERON:0007811!8.83e-10!86;UBERON:0000153!1.21e-09!94;UBERON:0004121!4.16e-09!102;UBERON:0000924!4.16e-09!102;UBERON:0006601!4.16e-09!102;UBERON:0003080!1.03e-08!40;UBERON:0000007!1.19e-08!8;UBERON:0003296!1.19e-08!8;UBERON:0010133!1.19e-08!8;UBERON:0001017!1.85e-08!73;UBERON:0005743!1.85e-08!73;UBERON:0002780!3.05e-08!39;UBERON:0001890!3.05e-08!39;UBERON:0006240!3.05e-08!39;UBERON:0000073!6.11e-08!75;UBERON:0001016!6.11e-08!75;UBERON:0000970!7.29e-08!9;UBERON:0000019!7.29e-08!9;UBERON:0000047!7.29e-08!9;UBERON:0004088!7.29e-08!9;UBERON:0002104!7.29e-08!9;UBERON:0001456!7.29e-08!9;UBERON:0003072!7.29e-08!9;UBERON:0003071!7.29e-08!9;UBERON:0004128!7.29e-08!9;UBERON:0001444!1.15e-07!11;UBERON:0000020!6.26e-07!12;UBERON:0001032!6.26e-07!12;UBERON:0004456!6.26e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.33e-20,8;UBERON:0003296,2.33e-20,8;UBERON:0010133,2.33e-20,8;UBERON:0001894,2.72e-16,10;UBERON:0006222,2.72e-16,10;UBERON:0003210,3.47e-13,2;UBERON:0000020,9.95e-09,12;UBERON:0001032,9.95e-09,12;UBERON:0004456,9.95e-09,12;UBERON:0000033,4.51e-08,13;UBERON:0005085,4.51e-08,13;UBERON:0003056,1.31e-07,49;UBERON:0000970,8.66e-07,9;UBERON:0000019,8.66e-07,9;UBERON:0000047,8.66e-07,9;UBERON:0010312,8.66e-07,9;UBERON:0004088,8.66e-07,9;UBERON:0002104,8.66e-07,9;UBERON:0001456,8.66e-07,9;UBERON:0003072,8.66e-07,9;UBERON:0004128,8.66e-07,9;UBERON:0003071,8.66e-07,9 | |||
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,0,0,0,0,0,0,0,0,0,0,1.35537812827653,1.77858959222228,0,0,0,0,1.15265491596466,0.311068836925433,0.135005938331691,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.307213066512487,0,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.811206315338788,0,0.124406970610093,0,0.210441855886474,2.60240885925407,1.83921683546778,0.180062129805349,1.65775299619287,0.612328492361951,0.768682321709099,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,3.06103859853227,0.517434735131018,2.7863814554107,4.43350584105684,2.67553226403106,3.62007845324666,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.103787347584177,2.79317411380722,0.341467211508268,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.754505365544305,0.37456602987953,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0.182927972872773,0,0.271608227691724,0,0.474540072496697,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0,1.07435527024149,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr13:32305969..32305996,- | |||
}} |
Latest revision as of 21:41, 5 August 2015
Short description: | p@chr13:32305969..32305996, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:32305969..32305996, - |
Coexpression cluster: | MCL_coexpression_mm9:2065 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 3.47e-13 | 2 |
secretory cell | 4.24e-09 | 3 |
stromal cell | 4.24e-09 | 3 |
extracellular matrix secreting cell | 4.24e-09 | 3 |
ear hair cell | 4.65e-08 | 1 |
auditory hair cell | 4.65e-08 | 1 |
mechanoreceptor cell | 4.65e-08 | 1 |
sensory hair cell | 4.65e-08 | 1 |
cochlear inner hair cell | 4.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.33e-20 | 8 |
gland of diencephalon | 2.33e-20 | 8 |
neuroendocrine gland | 2.33e-20 | 8 |
diencephalon | 2.72e-16 | 10 |
future diencephalon | 2.72e-16 | 10 |
blood-cerebrospinal fluid barrier | 3.47e-13 | 2 |
sense organ | 9.95e-09 | 12 |
sensory system | 9.95e-09 | 12 |
entire sense organ system | 9.95e-09 | 12 |
head | 4.51e-08 | 13 |
ectodermal placode | 4.51e-08 | 13 |
pre-chordal neural plate | 1.31e-07 | 49 |
eye | 8.66e-07 | 9 |
camera-type eye | 8.66e-07 | 9 |
simple eye | 8.66e-07 | 9 |
immature eye | 8.66e-07 | 9 |
ocular region | 8.66e-07 | 9 |
visual system | 8.66e-07 | 9 |
face | 8.66e-07 | 9 |
optic cup | 8.66e-07 | 9 |
optic vesicle | 8.66e-07 | 9 |
eye primordium | 8.66e-07 | 9 |