FFCP PHASE1:Mm9::chr8:123012316..123012390,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=382034|HGNC=|UniProt=Q3U3C9|association_with_transcript=-375bp_to_ENSMUST00000034279,NM_198671,uc009nqz.2_5end|description=CAGE_peak_3_at_Gse1_5end|id=chr8:123012316..123012390,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!5.71e-08!86;UBERON:0003056!7.18e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.52e-07,49|phase1_expression=0.960893082628764,0,0.454999239389536,1.51232105653415,4.00716583957078,1.17515490338323,3.50418960893289,2.84071311571468,3.801295498095,3.7450324211519,0,0.398860794976682,5.30722262786738,4.02133851127388,5.3297561890506,8.09901069559304,7.69518065940961,9.14840279538889,9.1866670515845,5.09267582157636,5.18764069921526,10.0283860712894,5.74639536105658,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,13.9706748161119,15.9916844771988,31.6963362030877,0.866554859253824,0.498703936075477,0.816677425049476,0,0.7813353445238,0,1.76469446409304,1.36609096991689,0,1.76255545165808,1.52065396829272,0.917733760808408,0,4.14247797122848,0,1.36100929351998,0.419959264876088,1.43752564364972,8.55691290894455,5.07753499407941,13.779845764841,0.257259436035947,0.573066879877513,0.515672092277442,9.71119012126069,10.5798195854407,6.33831403506179,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.79760066311043,3.07374644257244,15.5534418462716,13.095576018174,11.1472229516232,2.28520787523043,2.87129103237098,14.5764051065795,12.4599112323707,14.7075005857603,2.20231761998777,2.93680877595932,1.99688493233117,6.19865552331911,2.92760459527711,9.37644067002168,0.558365998002762,1.12552522006336,1.98637722109853,4.12480019663135,3.27454865837937,5.40558392893372,1.4387976733305,0.982430281388212,11.8844440367688,0,0,0,1.29955283489534,0,1.68533304158102,0.681721290312231,0.779358013808606,1.7666978725517,0.985903938436763,5.13305909657271,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,1.48439043634778,19.1614033898907,2.07818994690755,2.94925055502431,3.95805121805784,5.07354093963329,3.16517545160507,5.17390311397101,1.63366568728578,2.22475470960936,4.62717942143717,8.84610551949874,1.61766849947409,5.07935492458905,4.84875253135222,1.86391761218122,4.9772735491963,6.70229461803056,2.29911349687732,14.4976300652164,4.19931911695385,9.91147771169905,1.79748767285787,2.28750301409313,7.91622418311046,6.43149984711423,6.39288643325826,1.0389402227978,4.38051410282946,0.81471491080253,6.46916247172484,1.51633655060205,12.416069497302,3.25301107406759,3.21862946206862,7.56260945182467,14.4676625122286,29.255694635071,41.8931865331459,57.2517537059943,25.3529303324235,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.834141747676794,3.1342694986995,1.85203922767149,0.995171334092466,2.1066395619397,4.11756651383544,7.10408748488982,8.49215667395558,4.92504725960302,2.70093092191522,3.07768156260773,2.75469924446365,2.31400669331067,3.48800917125612,1.3413670069981,2.56883753207773,1.48103864922132,2.62667942526552,2.59420190546738,1.75439984910399,3.29325172936576,3.22095405024892,23.131894342054,19.9634948015812,2.64335026387038,2.11560453330835,2.13288250535234,4.18026009348789,4.12375876230699,3.02525286935014,2.66853652613844,1.33157938278791,2.84717436926707,0.494096864172033,2.76468729680296,1.1937388322469,1.9496408711912,3.59527763461689,1.29682829924817,1.7922714592893,2.84501851429623,3.08470984046268,5.63538678365402,2.03651327845314,4.84881217919064,3.0158402552837,2.84564417059158,3.09981310757165,2.98297582898612,1.48076596706161,0.296452627087149,8.3422552858047,10.2210677458866,5.62155280962134,6.08580364165509,4.82354319504834,3.56476192493988,7.19240343627027,3.72911021582581,1.37280706594041,2.87536413054709,3.34926852901653,1.5601883655728,1.01031551178845,1.97337154874103,0.964887042726734,17.1820466854942,1.13694847062291,4.07412441105065,4.92260748748046,5.63256595892405,8.71032538697442,7.61739650835244,7.80534591431195,14.029527825451,13.9522754478728,13.3942005672289,13.9283817508377,11.3972088031491,14.0309586824066,1.50791283939272,7.61467957346193,1.47529281905711,3.58717770196152,1.44495530989013,0.586058432961016,0,2.27223834483936,4.41711507182759,7.41833614163613,9.04778270477756,2.86762557543062,4.90157082981267,7.35998980050964,7.2865926301481,9.35218745316198,9.09161889277004,11.8888887076069,1.98716119291576,1.6025904330053,0.325773918707152,6.10389454998381,2.65490276679926,2.91336763385978,3.02323556964751,2.82907619633847,1.47650946440386,3.3817866273832,3.35956781118687,4.36240475373007,3.92147116223193,2.84433082142234,1.05418608574999,4.12542172992747,10.2131881726136,3.78128297465751,5.17434735131018,7.93047029616891,13.3005175231705,11.7723419617367,7.89835298890181,8.82948352432338,3.05073220482823,3.81297727554876,3.96951116498931,3.62749756471256,1.61464426695906,2.71408162176701,1.07435109602823,1.47726809770555,2.91480836629851,2.03967832211561,11.4483490134561,2.47664241555867,3.51869602002452,10.9253705062721,21.3242995244799,5.26189798375002,6.62915876976036,9.23679585336143,8.153798454461,2.86401185404534,0.632671987162271,3.04979200690273,2.05210147561422,2.92723614420256,1.52853794622324,2.29269388854195,1.98368293740806,1.57053565190418,1.42576470620972,2.4853572523477,1.69107881605257,1.64468200648377,0.66183396182839,1.94451188344048,1.16243841129958,1.520605129417,0.938857909166032,2.47388331203505,6.08184197669123,0.966336483304024,0.288030006257865,15.8005560314089,3.85177909051312,5.6491026440655,6.10627867995637,10.025494957379,10.3314304486258,9.01465871399766,12.1105412283153,12.2169404437259,10.82136654501,14.3173182894314,15.6907187991001,13.7582933545671,10.8695519028859,1.13365191807606,0.443971906748129,0.807424709485281,0.671538465456314,3.86379188064381,2.25218970541418,2.01466786693992,1.07184189539533,1.00314420807073,7.34177395402186,1.84130094602871,6.30185064783336,19.247556422493,1.37016503954128,0.755393897389701,4.72515750162264,4.95353323546643,4.07828168085784,5.69536342927002,3.1136204275253,8.77854721482268,3.58540572083682,4.86213434136588,2.93458427679175,5.1476182366004,6.00066165064361,3.29656091582231,2.24643446714271,6.31743029409494,2.28131369901216,3.77252682772152,4.02658482120494,4.35371036353111,4.53740204749345,4.76293691283074,4.05595140806994,2.31491064556446,4.94503080963968,4.12156976376312,3.42869252385415,4.43689515398344,4.05341522910446,6.1045494985578,4.14081273827455,4.56918882615053,4.75612729469209,5.5244639401947,5.43216455383447,5.05028044491965,3.6776855618494,3.84167481264697,5.32000356120596,6.35241048862461,3.2794123866794,4.99621155875892,1.63752125911786,4.94203424311086,0.765153328275374,2.8676884485537,2.78241402744506|short_description=p3@Gse1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:382034 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U3C9 | |||
|association_with_transcript=-375bp_to_ENSMUST00000034279,NM_198671,uc009nqz.2_5end | |||
|cluster_id=chr8:123012316..123012390,+ | |||
|description=CAGE_peak_3_at_Gse1_5end | |||
|id=chr8:123012316..123012390,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!5.71e-08!86;UBERON:0003056!7.18e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.52e-07,49 | |||
|phase1_expression=0.960893082628764,0,0.454999239389536,1.51232105653415,4.00716583957078,1.17515490338323,3.50418960893289,2.84071311571468,3.801295498095,3.7450324211519,0,0.398860794976682,5.30722262786738,4.02133851127388,5.3297561890506,8.09901069559304,7.69518065940961,9.14840279538889,9.1866670515845,5.09267582157636,5.18764069921526,10.0283860712894,5.74639536105658,1.11994695955385,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,13.9706748161119,15.9916844771988,31.6963362030877,0.866554859253824,0.498703936075477,0.816677425049476,0,0.7813353445238,0,1.76469446409304,1.36609096991689,0,1.76255545165808,1.52065396829272,0.917733760808408,0,4.14247797122848,0,1.36100929351998,0.419959264876088,1.43752564364972,8.55691290894455,5.07753499407941,13.779845764841,0.257259436035947,0.573066879877513,0.515672092277442,9.71119012126069,10.5798195854407,6.33831403506179,0.338844532069132,0,0.449949858640699,0,0.7104801149461,1.79760066311043,3.07374644257244,15.5534418462716,13.095576018174,11.1472229516232,2.28520787523043,2.87129103237098,14.5764051065795,12.4599112323707,14.7075005857603,2.20231761998777,2.93680877595932,1.99688493233117,6.19865552331911,2.92760459527711,9.37644067002168,0.558365998002762,1.12552522006336,1.98637722109853,4.12480019663135,3.27454865837937,5.40558392893372,1.4387976733305,0.982430281388212,11.8844440367688,0,0,0,1.29955283489534,0,1.68533304158102,0.681721290312231,0.779358013808606,1.7666978725517,0.985903938436763,5.13305909657271,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,1.48439043634778,19.1614033898907,2.07818994690755,2.94925055502431,3.95805121805784,5.07354093963329,3.16517545160507,5.17390311397101,1.63366568728578,2.22475470960936,4.62717942143717,8.84610551949874,1.61766849947409,5.07935492458905,4.84875253135222,1.86391761218122,4.9772735491963,6.70229461803056,2.29911349687732,14.4976300652164,4.19931911695385,9.91147771169905,1.79748767285787,2.28750301409313,7.91622418311046,6.43149984711423,6.39288643325826,1.0389402227978,4.38051410282946,0.81471491080253,6.46916247172484,1.51633655060205,12.416069497302,3.25301107406759,3.21862946206862,7.56260945182467,14.4676625122286,29.255694635071,41.8931865331459,57.2517537059943,25.3529303324235,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.834141747676794,3.1342694986995,1.85203922767149,0.995171334092466,2.1066395619397,4.11756651383544,7.10408748488982,8.49215667395558,4.92504725960302,2.70093092191522,3.07768156260773,2.75469924446365,2.31400669331067,3.48800917125612,1.3413670069981,2.56883753207773,1.48103864922132,2.62667942526552,2.59420190546738,1.75439984910399,3.29325172936576,3.22095405024892,23.131894342054,19.9634948015812,2.64335026387038,2.11560453330835,2.13288250535234,4.18026009348789,4.12375876230699,3.02525286935014,2.66853652613844,1.33157938278791,2.84717436926707,0.494096864172033,2.76468729680296,1.1937388322469,1.9496408711912,3.59527763461689,1.29682829924817,1.7922714592893,2.84501851429623,3.08470984046268,5.63538678365402,2.03651327845314,4.84881217919064,3.0158402552837,2.84564417059158,3.09981310757165,2.98297582898612,1.48076596706161,0.296452627087149,8.3422552858047,10.2210677458866,5.62155280962134,6.08580364165509,4.82354319504834,3.56476192493988,7.19240343627027,3.72911021582581,1.37280706594041,2.87536413054709,3.34926852901653,1.5601883655728,1.01031551178845,1.97337154874103,0.964887042726734,17.1820466854942,1.13694847062291,4.07412441105065,4.92260748748046,5.63256595892405,8.71032538697442,7.61739650835244,7.80534591431195,14.029527825451,13.9522754478728,13.3942005672289,13.9283817508377,11.3972088031491,14.0309586824066,1.50791283939272,7.61467957346193,1.47529281905711,3.58717770196152,1.44495530989013,0.586058432961016,0,2.27223834483936,4.41711507182759,7.41833614163613,9.04778270477756,2.86762557543062,4.90157082981267,7.35998980050964,7.2865926301481,9.35218745316198,9.09161889277004,11.8888887076069,1.98716119291576,1.6025904330053,0.325773918707152,6.10389454998381,2.65490276679926,2.91336763385978,3.02323556964751,2.82907619633847,1.47650946440386,3.3817866273832,3.35956781118687,4.36240475373007,3.92147116223193,2.84433082142234,1.05418608574999,4.12542172992747,10.2131881726136,3.78128297465751,5.17434735131018,7.93047029616891,13.3005175231705,11.7723419617367,7.89835298890181,8.82948352432338,3.05073220482823,3.81297727554876,3.96951116498931,3.62749756471256,1.61464426695906,2.71408162176701,1.07435109602823,1.47726809770555,2.91480836629851,2.03967832211561,11.4483490134561,2.47664241555867,3.51869602002452,10.9253705062721,21.3242995244799,5.26189798375002,6.62915876976036,9.23679585336143,8.153798454461,2.86401185404534,0.632671987162271,3.04979200690273,2.05210147561422,2.92723614420256,1.52853794622324,2.29269388854195,1.98368293740806,1.57053565190418,1.42576470620972,2.4853572523477,1.69107881605257,1.64468200648377,0.66183396182839,1.94451188344048,1.16243841129958,1.520605129417,0.938857909166032,2.47388331203505,6.08184197669123,0.966336483304024,0.288030006257865,15.8005560314089,3.85177909051312,5.6491026440655,6.10627867995637,10.025494957379,10.3314304486258,9.01465871399766,12.1105412283153,12.2169404437259,10.82136654501,14.3173182894314,15.6907187991001,13.7582933545671,10.8695519028859,1.13365191807606,0.443971906748129,0.807424709485281,0.671538465456314,3.86379188064381,2.25218970541418,2.01466786693992,1.07184189539533,1.00314420807073,7.34177395402186,1.84130094602871,6.30185064783336,19.247556422493,1.37016503954128,0.755393897389701,4.72515750162264,4.95353323546643,4.07828168085784,5.69536342927002,3.1136204275253,8.77854721482268,3.58540572083682,4.86213434136588,2.93458427679175,5.1476182366004,6.00066165064361,3.29656091582231,2.24643446714271,6.31743029409494,2.28131369901216,3.77252682772152,4.02658482120494,4.35371036353111,4.53740204749345,4.76293691283074,4.05595140806994,2.31491064556446,4.94503080963968,4.12156976376312,3.42869252385415,4.43689515398344,4.05341522910446,6.1045494985578,4.14081273827455,4.56918882615053,4.75612729469209,5.5244639401947,5.43216455383447,5.05028044491965,3.6776855618494,3.84167481264697,5.32000356120596,6.35241048862461,3.2794123866794,4.99621155875892,1.63752125911786,4.94203424311086,0.765153328275374,2.8676884485537,2.78241402744506 | |||
|short_description=p3@Gse1 | |||
}} |
Revision as of 01:10, 6 August 2015
Short description: | p3@Gse1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gse1_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENSMUST00000034279, NM_198671, uc009nqz.2_5end |
EntrezGene: | 382034 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 6.52e-07 | 49 |