FFCP PHASE1:Mm9::chr3:136347850..136347865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:136347850..136347865,+ | |||
|description=CAGE_peak_at_chr3:136347850..136347865,+ | |description=CAGE_peak_at_chr3:136347850..136347865,+ | ||
|id=chr3:136347850..136347865,+ | |id=chr3:136347850..136347865,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.26e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!9.97e-10!3;DOID:4045!9.97e-10!3 | |ontology_enrichment_disease=DOID:0060100!9.97e-10!3;DOID:4045!9.97e-10!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.54e-29,3;DOID:4045,1.54e-29,3;DOID:0050686,2.21e-15,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.26e-10,9;UBERON:0002036,1.26e-10,9;UBERON:0002385,1.26e-10,9;UBERON:0000486,1.26e-10,9;UBERON:0007503,1.26e-10,9;UBERON:0001015,1.26e-10,9;UBERON:0002329,1.26e-10,9;UBERON:0003082,1.26e-10,9;UBERON:0003059,1.26e-10,9;UBERON:0007282,1.26e-10,9;UBERON:0004290,1.26e-10,9;UBERON:0009618,1.26e-10,9;UBERON:0000383,1.14e-09,10;UBERON:0007524,6.95e-09,11;UBERON:0003077,6.95e-09,11;UBERON:0007285,6.95e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0,1.0470474879476,23.5292595212406,2.73218193983378,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0,1.0470474879476,23.5292595212406,2.73218193983378,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:136347850..136347865,+ | |short_description=p@chr3:136347850..136347865,+ | ||
}} | }} |
Latest revision as of 02:29, 6 August 2015
Short description: | p@chr3:136347850..136347865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:136347850..136347865, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.26e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.26e-10 | 9 |
striated muscle tissue | 1.26e-10 | 9 |
muscle tissue | 1.26e-10 | 9 |
multilaminar epithelium | 1.26e-10 | 9 |
epithelial vesicle | 1.26e-10 | 9 |
musculature | 1.26e-10 | 9 |
somite | 1.26e-10 | 9 |
myotome | 1.26e-10 | 9 |
presomitic mesoderm | 1.26e-10 | 9 |
presumptive segmental plate | 1.26e-10 | 9 |
dermomyotome | 1.26e-10 | 9 |
trunk paraxial mesoderm | 1.26e-10 | 9 |
musculature of body | 1.14e-09 | 10 |
dense mesenchyme tissue | 6.95e-09 | 11 |
paraxial mesoderm | 6.95e-09 | 11 |
presumptive paraxial mesoderm | 6.95e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.54e-29 | 3 |
muscle cancer | 1.54e-29 | 3 |
organ system cancer | 2.21e-15 | 6 |