FFCP PHASE1:Mm9::chr6:78323455..78323458,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78323455..78323458,-|id=chr6:78323455..78323458,-|ontology_enrichment_celltype=CL:0000473!4.00e-20!3;CL:0000627!4.00e-20!3;CL:0000682!4.00e-20!3;CL:0000239!7.23e-17!6;CL:0000677!7.23e-17!6;CL:0000212!7.23e-17!6;CL:0000584!7.23e-17!6;CL:0000075!1.67e-14!7;CL:0000066!6.58e-12!25;CL:0002563!2.41e-11!9;CL:0002251!2.41e-11!9;CL:0002076!6.83e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,7.42e-16,3;CL:0000239,4.03e-08,6;CL:0000677,4.03e-08,6;CL:0000584,4.03e-08,6;CL:0000066,2.02e-07,25;CL:0000473,2.46e-07,7;CL:0000075,4.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.50e-26!15;UBERON:0001242!1.90e-23!13;UBERON:0000060!1.90e-23!13;UBERON:0001262!1.90e-23!13;UBERON:0004786!1.90e-23!13;UBERON:0000331!2.57e-20!3;UBERON:0002116!2.57e-20!3;UBERON:0001204!2.57e-20!3;UBERON:0001168!2.57e-20!3;UBERON:0004923!4.05e-16!24;UBERON:0000160!1.33e-13!43;UBERON:0003350!2.41e-11!9;UBERON:0004808!2.41e-11!9;UBERON:0001277!2.41e-11!9;UBERON:0005409!1.30e-09!59;UBERON:0000485!2.51e-09!11;UBERON:0003199!2.74e-07!1;UBERON:0002108!9.34e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.31e-33,3;UBERON:0002116,1.31e-33,3;UBERON:0001204,1.31e-33,3;UBERON:0001168,1.31e-33,3;UBERON:0002108,1.99e-25,4;UBERON:0001242,3.49e-21,13;UBERON:0001262,3.49e-21,13;UBERON:0004786,3.49e-21,13;UBERON:0000344,2.09e-18,15;UBERON:0004923,1.31e-11,24;UBERON:0000160,4.92e-09,31|phase1_expression=0,0,1.81999695755814,0.60492842261366,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,4.01962374880514,3.87685796543167,0.646413698057667,2.28028103347649,1.51218077855958,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78323455..78323458,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:78323455..78323458,- | |||
|description=CAGE_peak_at_chr6:78323455..78323458,- | |||
|id=chr6:78323455..78323458,- | |||
|ontology_enrichment_celltype=CL:0000473!4.00e-20!3;CL:0000627!4.00e-20!3;CL:0000682!4.00e-20!3;CL:0000239!7.23e-17!6;CL:0000677!7.23e-17!6;CL:0000212!7.23e-17!6;CL:0000584!7.23e-17!6;CL:0000075!1.67e-14!7;CL:0000066!6.58e-12!25;CL:0002563!2.41e-11!9;CL:0002251!2.41e-11!9;CL:0002076!6.83e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.42e-16,3;CL:0000239,4.03e-08,6;CL:0000677,4.03e-08,6;CL:0000584,4.03e-08,6;CL:0000066,2.02e-07,25;CL:0000473,2.46e-07,7;CL:0000075,4.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.50e-26!15;UBERON:0001242!1.90e-23!13;UBERON:0000060!1.90e-23!13;UBERON:0001262!1.90e-23!13;UBERON:0004786!1.90e-23!13;UBERON:0000331!2.57e-20!3;UBERON:0002116!2.57e-20!3;UBERON:0001204!2.57e-20!3;UBERON:0001168!2.57e-20!3;UBERON:0004923!4.05e-16!24;UBERON:0000160!1.33e-13!43;UBERON:0003350!2.41e-11!9;UBERON:0004808!2.41e-11!9;UBERON:0001277!2.41e-11!9;UBERON:0005409!1.30e-09!59;UBERON:0000485!2.51e-09!11;UBERON:0003199!2.74e-07!1;UBERON:0002108!9.34e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.31e-33,3;UBERON:0002116,1.31e-33,3;UBERON:0001204,1.31e-33,3;UBERON:0001168,1.31e-33,3;UBERON:0002108,1.99e-25,4;UBERON:0001242,3.49e-21,13;UBERON:0001262,3.49e-21,13;UBERON:0004786,3.49e-21,13;UBERON:0000344,2.09e-18,15;UBERON:0004923,1.31e-11,24;UBERON:0000160,4.92e-09,31 | |||
|phase1_expression=0,0,1.81999695755814,0.60492842261366,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,4.01962374880514,3.87685796543167,0.646413698057667,2.28028103347649,1.51218077855958,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78323455..78323458,- | |||
}} |
Latest revision as of 03:32, 6 August 2015
Short description: | p@chr6:78323455..78323458, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78323455..78323458, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.42e-16 | 3 |
brush border epithelial cell | 4.03e-08 | 6 |
gut absorptive cell | 4.03e-08 | 6 |
enterocyte | 4.03e-08 | 6 |
epithelial cell | 2.02e-07 | 25 |
defensive cell | 2.46e-07 | 7 |
columnar/cuboidal epithelial cell | 4.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 1.31e-33 | 3 |
ileum | 1.31e-33 | 3 |
mucosa of small intestine | 1.31e-33 | 3 |
wall of small intestine | 1.31e-33 | 3 |
small intestine | 1.99e-25 | 4 |
intestinal mucosa | 3.49e-21 | 13 |
wall of intestine | 3.49e-21 | 13 |
gastrointestinal system mucosa | 3.49e-21 | 13 |
mucosa | 2.09e-18 | 15 |
organ component layer | 1.31e-11 | 24 |
intestine | 4.92e-09 | 31 |