FFCP PHASE1:Mm9::chr11:5798013..5798046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=45 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5798013..5798046,- | |||
|description=CAGE_peak_at_chr11:5798013..5798046,- | |description=CAGE_peak_at_chr11:5798013..5798046,- | ||
|id=chr11:5798013..5798046,- | |id=chr11:5798013..5798046,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.81e-08,3;CL:0002202,2.81e-08,3;CL:0000069,2.81e-08,3;CL:0002632,2.81e-08,3;CL:0002368,2.81e-08,3;CL:0000307,2.81e-08,3;CL:0000377,2.81e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.88e-13!18;UBERON:0000948!2.88e-13!18;UBERON:0005498!2.88e-13!18;UBERON:0004140!2.88e-13!18;UBERON:0009881!2.88e-13!18;UBERON:0004141!2.88e-13!18;UBERON:0003084!2.88e-13!18;UBERON:0007005!2.88e-13!18;UBERON:0004139!2.88e-13!18;UBERON:0004291!2.88e-13!18;UBERON:0004535!3.46e-10!23;UBERON:0001009!3.46e-10!23;UBERON:0003103!1.90e-08!43;UBERON:0005178!8.69e-08!17;UBERON:0005181!8.69e-08!17;UBERON:0002224!8.69e-08!17;UBERON:0000915!8.69e-08!17;UBERON:0008947!8.69e-08!17;UBERON:0003258!8.69e-08!17;UBERON:0004872!5.74e-07!33 | |ontology_enrichment_uberon=UBERON:0007100!2.88e-13!18;UBERON:0000948!2.88e-13!18;UBERON:0005498!2.88e-13!18;UBERON:0004140!2.88e-13!18;UBERON:0009881!2.88e-13!18;UBERON:0004141!2.88e-13!18;UBERON:0003084!2.88e-13!18;UBERON:0007005!2.88e-13!18;UBERON:0004139!2.88e-13!18;UBERON:0004291!2.88e-13!18;UBERON:0004535!3.46e-10!23;UBERON:0001009!3.46e-10!23;UBERON:0003103!1.90e-08!43;UBERON:0005178!8.69e-08!17;UBERON:0005181!8.69e-08!17;UBERON:0002224!8.69e-08!17;UBERON:0000915!8.69e-08!17;UBERON:0008947!8.69e-08!17;UBERON:0003258!8.69e-08!17;UBERON:0004872!5.74e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.16e-32,18;UBERON:0000948,7.16e-32,18;UBERON:0005498,7.16e-32,18;UBERON:0004140,7.16e-32,18;UBERON:0009881,7.16e-32,18;UBERON:0004141,7.16e-32,18;UBERON:0003084,7.16e-32,18;UBERON:0007005,7.16e-32,18;UBERON:0004139,7.16e-32,18;UBERON:0004291,7.16e-32,18;UBERON:0004535,4.86e-24,23;UBERON:0001009,4.86e-24,23;UBERON:0003103,3.91e-18,43;UBERON:0004872,1.16e-17,33;UBERON:0003914,1.04e-09,47;UBERON:0003126,2.81e-08,3;UBERON:0001005,2.81e-08,3;UBERON:0007196,2.81e-08,3;UBERON:0001558,2.81e-08,3 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.799962113967033,0.68822784320151,1.14846392823004,3.4460959692726,0.861884930743556,0,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0.85960031981627,3.09403255366465,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,9.74209684550464,11.9079136773296,9.60496445528088,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,1.69156575851515,1.60931473103431,0.360124259610698,0.60281927134286,0.408218994907967,0,0.281105173679186,0.258703370739016,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0.411564272815887,0.59710280045548,0,0,0,15.3273071676271,20.4037672183554,15.8454614085693,10.4167683657493,15.7411385397923,14.1925743856388,8.37122201101468,8.04820204198858,6.18856314545998,3.78487654801005,2.62667942526552,2.51313309592153,5.99419948443863,7.46470391989572,9.5286557319864,0,0,0.991256348951394,0,0.639864751605702,0.696710015581316,1.80414445850931,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,1.13800740571849,0.685491075658373,0,0.203651327845314,0.969762435838129,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,3.22135400009824,0.488894929326078,2.03694102930226,0.704070744865506,1.84256883185997,1.42826184531608,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.485561272309963,0,0.377210159511796,0,0,0.258428293168221,0,0,0,0,0,0,1.26042765821917,1.16422815404479,0.428674070063185,0.709360934569094,0.356737635204141,0.329098041204242,0,0.469343416127421,3.1774810629573,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42351197111511,0.609958401380546,1.40406943068342,0.209088296014469,1.74690050996942,1.21377911746339,0.661227645802687,0.523511883968059,0,0,0,1.34564891439581,0.827292452285488,0.583353565032143,0.645799117388655,0.337912250981556,0.469428954583016,0.2604087696879,0.314578033277133,0.724752362478018,0.288030006257865,0,0.608175645870493,0,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0,0.73171189149109,0,0.271608227691724,0,0.593175090620871,0.0985044823755635,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0,0,0,0 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| ||
|short_description=p@chr11:5798013..5798046,- | |short_description=p@chr11:5798013..5798046,- | ||
}} | }} |
Latest revision as of 03:52, 6 August 2015
Short description: | p@chr11:5798013..5798046, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5798013..5798046, - |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.81e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.81e-08 | 3 |
branched duct epithelial cell | 2.81e-08 | 3 |
epithelial cell of lower respiratory tract | 2.81e-08 | 3 |
respiratory epithelial cell | 2.81e-08 | 3 |
tracheal epithelial cell | 2.81e-08 | 3 |
tracheoblast | 2.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.16e-32 | 18 |
heart | 7.16e-32 | 18 |
primitive heart tube | 7.16e-32 | 18 |
primary heart field | 7.16e-32 | 18 |
anterior lateral plate mesoderm | 7.16e-32 | 18 |
heart tube | 7.16e-32 | 18 |
heart primordium | 7.16e-32 | 18 |
cardiac mesoderm | 7.16e-32 | 18 |
cardiogenic plate | 7.16e-32 | 18 |
heart rudiment | 7.16e-32 | 18 |
cardiovascular system | 4.86e-24 | 23 |
circulatory system | 4.86e-24 | 23 |
compound organ | 3.91e-18 | 43 |
splanchnic layer of lateral plate mesoderm | 1.16e-17 | 33 |
epithelial tube | 1.04e-09 | 47 |
trachea | 2.81e-08 | 3 |
respiratory airway | 2.81e-08 | 3 |
tracheobronchial tree | 2.81e-08 | 3 |
lower respiratory tract | 2.81e-08 | 3 |