FFCP PHASE1:Mm9::chr5:135420996..135421000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135420996..135421000,+ | |||
|description=CAGE_peak_at_chr5:135420996..135421000,+ | |description=CAGE_peak_at_chr5:135420996..135421000,+ | ||
|id=chr5:135420996..135421000,+ | |id=chr5:135420996..135421000,+ | ||
|ontology_enrichment_celltype=CL:0000068!1.22e-20!3;CL:0002202!1.22e-20!3;CL:0000069!1.22e-20!3;CL:0002632!1.22e-20!3;CL:0002368!1.22e-20!3;CL:0000307!1.22e-20!3;CL:0000377!1.22e-20!3;CL:0000066!5.20e-12!25;CL:0002076!8.28e-11!15;CL:0000075!1.76e-08!7;CL:0000223!4.40e-08!20;CL:0000710!3.16e-07!1;CL:0002077!3.16e-07!1;CL:0005014!3.16e-07!1;CL:0002315!3.16e-07!1;CL:0002490!3.16e-07!1 | |ontology_enrichment_celltype=CL:0000068!1.22e-20!3;CL:0002202!1.22e-20!3;CL:0000069!1.22e-20!3;CL:0002632!1.22e-20!3;CL:0002368!1.22e-20!3;CL:0000307!1.22e-20!3;CL:0000377!1.22e-20!3;CL:0000066!5.20e-12!25;CL:0002076!8.28e-11!15;CL:0000075!1.76e-08!7;CL:0000223!4.40e-08!20;CL:0000710!3.16e-07!1;CL:0002077!3.16e-07!1;CL:0005014!3.16e-07!1;CL:0002315!3.16e-07!1;CL:0002490!3.16e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.58e-86,3;CL:0002202,1.58e-86,3;CL:0000069,1.58e-86,3;CL:0002632,1.58e-86,3;CL:0002368,1.58e-86,3;CL:0000307,1.58e-86,3;CL:0000377,1.58e-86,3;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!1.22e-20!3;UBERON:0001005!1.22e-20!3;UBERON:0007196!1.22e-20!3;UBERON:0001558!1.22e-20!3;UBERON:0000344!7.83e-15!15;UBERON:0001962!1.09e-13!2;UBERON:0001961!1.09e-13!2;UBERON:0001744!1.09e-13!2;UBERON:0002465!1.97e-09!3;UBERON:0000331!2.39e-09!3;UBERON:0002116!2.39e-09!3;UBERON:0001204!2.39e-09!3;UBERON:0001168!2.39e-09!3;UBERON:0004923!3.70e-09!24;UBERON:0001242!5.59e-08!13;UBERON:0000060!5.59e-08!13;UBERON:0001262!5.59e-08!13;UBERON:0004786!5.59e-08!13;UBERON:0003199!9.86e-08!1;UBERON:0002367!1.53e-07!1;UBERON:0009846!1.53e-07!1;UBERON:0003353!1.53e-07!1;UBERON:0004902!1.53e-07!1;UBERON:0003820!1.53e-07!1;UBERON:0009847!1.53e-07!1 | |ontology_enrichment_uberon=UBERON:0003126!1.22e-20!3;UBERON:0001005!1.22e-20!3;UBERON:0007196!1.22e-20!3;UBERON:0001558!1.22e-20!3;UBERON:0000344!7.83e-15!15;UBERON:0001962!1.09e-13!2;UBERON:0001961!1.09e-13!2;UBERON:0001744!1.09e-13!2;UBERON:0002465!1.97e-09!3;UBERON:0000331!2.39e-09!3;UBERON:0002116!2.39e-09!3;UBERON:0001204!2.39e-09!3;UBERON:0001168!2.39e-09!3;UBERON:0004923!3.70e-09!24;UBERON:0001242!5.59e-08!13;UBERON:0000060!5.59e-08!13;UBERON:0001262!5.59e-08!13;UBERON:0004786!5.59e-08!13;UBERON:0003199!9.86e-08!1;UBERON:0002367!1.53e-07!1;UBERON:0009846!1.53e-07!1;UBERON:0003353!1.53e-07!1;UBERON:0004902!1.53e-07!1;UBERON:0003820!1.53e-07!1;UBERON:0009847!1.53e-07!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.58e-86,3;UBERON:0001005,1.58e-86,3;UBERON:0007196,1.58e-86,3;UBERON:0001558,1.58e-86,3;UBERON:0005178,2.41e-16,17;UBERON:0005181,2.41e-16,17;UBERON:0002224,2.41e-16,17;UBERON:0000915,2.41e-16,17;UBERON:0008947,2.41e-16,17;UBERON:0003258,2.41e-16,17;UBERON:0000072,1.06e-10,27;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0003103,4.30e-07,43 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,4.32982082022428,6.08063677140237,7.07734223020697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,4.32982082022428,6.08063677140237,7.07734223020697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:135420996..135421000,+ | |short_description=p@chr5:135420996..135421000,+ | ||
}} | }} |
Latest revision as of 09:57, 6 August 2015
Short description: | p@chr5:135420996..135421000, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135420996..135421000, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.58e-86 | 3 |
epithelial cell of tracheobronchial tree | 1.58e-86 | 3 |
branched duct epithelial cell | 1.58e-86 | 3 |
epithelial cell of lower respiratory tract | 1.58e-86 | 3 |
respiratory epithelial cell | 1.58e-86 | 3 |
tracheal epithelial cell | 1.58e-86 | 3 |
tracheoblast | 1.58e-86 | 3 |
endo-epithelial cell | 2.29e-18 | 15 |
endodermal cell | 4.59e-14 | 20 |
epithelial cell | 1.80e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.58e-86 | 3 |
respiratory airway | 1.58e-86 | 3 |
tracheobronchial tree | 1.58e-86 | 3 |
lower respiratory tract | 1.58e-86 | 3 |
thoracic cavity element | 2.41e-16 | 17 |
thoracic segment organ | 2.41e-16 | 17 |
thoracic cavity | 2.41e-16 | 17 |
thoracic segment of trunk | 2.41e-16 | 17 |
respiratory primordium | 2.41e-16 | 17 |
endoderm of foregut | 2.41e-16 | 17 |
segment of respiratory tract | 1.06e-10 | 27 |
respiratory tract | 2.16e-07 | 41 |
respiratory system | 3.07e-07 | 42 |
compound organ | 4.30e-07 | 43 |