FFCP PHASE1:Mm9::chrX:75370805..75370809,+: Difference between revisions
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{{FFCP|EntrezGene=546335|HGNC=|MCL_coexpression_id=28|UniProt=A2AEN9|association_with_transcript=0bp_to_ENSMUST00000114030,NM_001085534,uc009tqv.1_5end|description=CAGE_peak_1_at_Gm5938_5end|id=chrX:75370805..75370809,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.26e-10!9;UBERON:0000019!1.26e-10!9;UBERON:0000047!1.26e-10!9;UBERON:0004088!1.26e-10!9;UBERON:0002104!1.26e-10!9;UBERON:0001456!1.26e-10!9;UBERON:0003072!1.26e-10!9;UBERON:0003071!1.26e-10!9;UBERON:0004128!1.26e-10!9;UBERON:0001444!6.95e-09!11;UBERON:0000020!3.15e-08!12;UBERON:0001032!3.15e-08!12;UBERON:0004456!3.15e-08!12;UBERON:0005085!1.13e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.26e-10,9;UBERON:0000019,1.26e-10,9;UBERON:0000047,1.26e-10,9;UBERON:0010312,1.26e-10,9;UBERON:0004088,1.26e-10,9;UBERON:0002104,1.26e-10,9;UBERON:0001456,1.26e-10,9;UBERON:0003072,1.26e-10,9;UBERON:0004128,1.26e-10,9;UBERON:0003071,1.26e-10,9;UBERON:0001444,6.95e-09,11;UBERON:0000020,3.15e-08,12;UBERON:0001032,3.15e-08,12;UBERON:0004456,3.15e-08,12;UBERON:0000033,1.13e-07,13;UBERON:0005085,1.13e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,400.82837505602,0,0,0,0,0,0,0,0,0,0,108.817237372264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6233018768745,0,0,0,0,0,0,0,9.8307280880826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm5938}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:546335 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AEN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000114030,NM_001085534,uc009tqv.1_5end | |||
|cluster_id=chrX:75370805..75370809,+ | |||
|description=CAGE_peak_1_at_Gm5938_5end | |||
|id=chrX:75370805..75370809,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.26e-10!9;UBERON:0000019!1.26e-10!9;UBERON:0000047!1.26e-10!9;UBERON:0004088!1.26e-10!9;UBERON:0002104!1.26e-10!9;UBERON:0001456!1.26e-10!9;UBERON:0003072!1.26e-10!9;UBERON:0003071!1.26e-10!9;UBERON:0004128!1.26e-10!9;UBERON:0001444!6.95e-09!11;UBERON:0000020!3.15e-08!12;UBERON:0001032!3.15e-08!12;UBERON:0004456!3.15e-08!12;UBERON:0005085!1.13e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.26e-10,9;UBERON:0000019,1.26e-10,9;UBERON:0000047,1.26e-10,9;UBERON:0010312,1.26e-10,9;UBERON:0004088,1.26e-10,9;UBERON:0002104,1.26e-10,9;UBERON:0001456,1.26e-10,9;UBERON:0003072,1.26e-10,9;UBERON:0004128,1.26e-10,9;UBERON:0003071,1.26e-10,9;UBERON:0001444,6.95e-09,11;UBERON:0000020,3.15e-08,12;UBERON:0001032,3.15e-08,12;UBERON:0004456,3.15e-08,12;UBERON:0000033,1.13e-07,13;UBERON:0005085,1.13e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,400.82837505602,0,0,0,0,0,0,0,0,0,0,108.817237372264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6233018768745,0,0,0,0,0,0,0,9.8307280880826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm5938 | |||
}} |
Revision as of 10:46, 6 August 2015
Short description: | p1@Gm5938 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5938_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 0bp_to_ENSMUST00000114030, NM_001085534, uc009tqv.1_5end |
EntrezGene: | 546335 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.26e-10 | 9 |
camera-type eye | 1.26e-10 | 9 |
simple eye | 1.26e-10 | 9 |
immature eye | 1.26e-10 | 9 |
ocular region | 1.26e-10 | 9 |
visual system | 1.26e-10 | 9 |
face | 1.26e-10 | 9 |
optic cup | 1.26e-10 | 9 |
optic vesicle | 1.26e-10 | 9 |
eye primordium | 1.26e-10 | 9 |
subdivision of head | 6.95e-09 | 11 |
sense organ | 3.15e-08 | 12 |
sensory system | 3.15e-08 | 12 |
entire sense organ system | 3.15e-08 | 12 |
head | 1.13e-07 | 13 |
ectodermal placode | 1.13e-07 | 13 |