FFCP PHASE1:Hg19::chr12:101604010..101604021,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160728 | |EntrezGene=160728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19119 | |HGNC=19119 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N695 | |UniProt=Q8N695 | ||
|association_with_transcript=0bp_to_NM_145913,uc001thz.3_5end | |association_with_transcript=0bp_to_NM_145913,uc001thz.3_5end | ||
|cluster_id=chr12:101604010..101604021,- | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_1_at_SLC5A8_5end | |description=CAGE_peak_1_at_SLC5A8_5end | ||
|id=chr12:101604010..101604021,- | |id=chr12:101604010..101604021,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.93e-18;5!UBERON:0003918;6.48e-10;10!UBERON:0007687;6.48e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003127;7.82e-45;2!UBERON:0002046;1.93e-18;5!UBERON:0003126;1.31e-13;7!UBERON:0001005;1.31e-13;7!UBERON:0000341;3.24e-12;2!UBERON:0007196;7.63e-07;15!UBERON:0001558;7.63e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.66e-18!2;UBERON:0000341!8.08e-18!2;UBERON:0002171!8.91e-10!1;UBERON:0006518!8.91e-10!1;UBERON:0008949!8.91e-10!1;UBERON:0000101!8.91e-10!1;UBERON:0002167!8.91e-10!1;UBERON:0007029!1.15e-09!1;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0007023!2.14e-08!115;UBERON:0000974!5.38e-08!10;UBERON:0002046!8.83e-08!5;UBERON:0004117!8.83e-08!5;UBERON:0007689!8.83e-08!5;UBERON:0007123!8.83e-08!5;UBERON:0003091!8.83e-08!5;UBERON:0009722!2.18e-07!11;UBERON:0007690!2.18e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;7.82e-45;2!UBERON:0002046;1.93e-18;5!UBERON:0003126;1.31e-13;7!UBERON:0001005;1.31e-13;7!UBERON:0000341;3.24e-12;2!UBERON:0007196;7.63e-07;15!UBERON:0001558;7.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.83e-45,2;UBERON:0002046,1.93e-18,5;UBERON:0004117,1.93e-18,5;UBERON:0007689,1.93e-18,5;UBERON:0007123,1.93e-18,5;UBERON:0003091,1.93e-18,5;UBERON:0003126,1.31e-13,7;UBERON:0001005,1.31e-13,7;UBERON:0000341,3.62e-12,2;UBERON:0009722,6.35e-09,11;UBERON:0007690,6.35e-09,11;UBERON:0007196,7.63e-07,15;UBERON:0001558,7.63e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.13835961462534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59520521824307,11.0679180964846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0.714193294391221,0,0.0620747142958579,0,2.16400338145761,1.41482032270754,0,0,0,4.08816570738255,4.32458463509817,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.13835961462534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59520521824307,11.0679180964846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0.714193294391221,0,0.0620747142958579,0,2.16400338145761,1.41482032270754,0,0,0,4.08816570738255,4.32458463509817,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SLC5A8 | |short_description=p1@SLC5A8 | ||
}} | }} |
Latest revision as of 18:01, 15 September 2015
Short description: | p1@SLC5A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A8_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_NM_145913, uc001thz.3_5end |
EntrezGene: | SLC5A8 |
HGNC: | 19119 |
UniProt: | Q8N695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.83e-45 | 2 |
thyroid gland | 1.93e-18 | 5 |
pharyngeal pouch | 1.93e-18 | 5 |
thyroid diverticulum | 1.93e-18 | 5 |
pharyngeal pouch 2 | 1.93e-18 | 5 |
thyroid primordium | 1.93e-18 | 5 |
trachea | 1.31e-13 | 7 |
respiratory airway | 1.31e-13 | 7 |
throat | 3.62e-12 | 2 |
entire pharyngeal arch endoderm | 6.35e-09 | 11 |
early pharyngeal endoderm | 6.35e-09 | 11 |
tracheobronchial tree | 7.63e-07 | 15 |
lower respiratory tract | 7.63e-07 | 15 |