FFCP PHASE1:Hg19::chr14:69865401..69865426,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:69865401..69865426,+ to FFCP PHASE1:Hg19::chr14:69865401..69865426,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55334 | |EntrezGene=55334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20182 | |HGNC=20182 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NUM3,G3V5J8 | |UniProt=Q9NUM3,G3V5J8 | ||
|association_with_transcript=0bp_to_ENST00000031146,ENST00000336643,ENST00000554059,ENST00000556605,uc001xld.3,uc001xle.2,uc001xlf.3,uc001xlg.3,uc010aqx.2_5end | |||
|cluster_id=chr14:69865401..69865426,+ | |||
|description=CAGE_peak_1_at_SLC39A9_5end | |||
|id=chr14:69865401..69865426,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.57e-09!143;DOID:305!1.94e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.57e-09,143;DOID:305,1.94e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.39e-09!365;UBERON:0001007!7.42e-08!155;UBERON:0001555!7.42e-08!155;UBERON:0007026!7.42e-08!155;UBERON:0004119!1.65e-07!169;UBERON:0000925!1.65e-07!169;UBERON:0006595!1.65e-07!169;UBERON:0000481!8.66e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.90e-09,223;UBERON:0001007,8.52e-07,145;UBERON:0001555,8.52e-07,145;UBERON:0007026,8.52e-07,145 | |||
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|short_description=p1@SLC39A9 | |||
}} | }} |
Latest revision as of 18:29, 15 September 2015
Short description: | p1@SLC39A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000031146, ENST00000336643, ENST00000554059, ENST00000556605, uc001xld.3, uc001xle.2, uc001xlf.3, uc001xlg.3, uc010aqx.2_5end |
EntrezGene: | SLC39A9 |
HGNC: | 20182 |
UniProt: | Q9NUM3G3V5J8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.90e-09 | 223 |
digestive system | 8.52e-07 | 145 |
digestive tract | 8.52e-07 | 145 |
primitive gut | 8.52e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.57e-09 | 143 |
carcinoma | 1.94e-07 | 106 |