FFCP PHASE1:Hg19::chr12:102224578..102224667,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79158 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29670 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUA5,F8W1L9,Q3T906 | |||
|association_with_transcript=0bp_to_ENST00000392919,ENST00000547090,ENST00000549940,NM_024312,uc001tit.2,uc001tiu.1,uc001tiw.2_5end | |||
|cluster_id=chr12:102224578..102224667,- | |||
|coexpression_cluster_id=C3217 | |||
|description=CAGE_peak_1_at_GNPTAB_5end | |||
|id=chr12:102224578..102224667,- | |||
|ontology_enrichment_celltype=CL:0000037!4.05e-19!172;CL:0000566!4.05e-19!172;CL:0002032!8.63e-18!165;CL:0000837!8.63e-18!165;CL:0000988!3.79e-16!182;CL:0000738!5.21e-15!140;CL:0000763!2.03e-14!112;CL:0000049!2.03e-14!112;CL:0002031!2.92e-12!124;CL:0002087!5.45e-11!119;CL:0000557!1.73e-10!71;CL:0000766!3.44e-09!76;CL:0000839!1.86e-08!70;CL:0002009!9.33e-08!65;CL:0002194!4.33e-07!63;CL:0000576!4.33e-07!63;CL:0000040!4.33e-07!63;CL:0000559!4.33e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.95e-19,168;CL:0002032,1.67e-17,161;CL:0000837,1.67e-17,161;CL:0000988,3.69e-16,177;CL:0000738,9.52e-15,136;CL:0000763,3.40e-14,108;CL:0000049,3.40e-14,108;CL:0002031,5.20e-12,120;CL:0002087,9.64e-11,115;CL:0000557,2.58e-10,67;CL:0000766,5.50e-09,72;CL:0000839,2.95e-08,66;CL:0002009,1.48e-07,61;CL:0002194,6.94e-07,59;CL:0000576,6.94e-07,59;CL:0000040,6.94e-07,59;CL:0000559,6.94e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.48e-14!102;UBERON:0003061!4.48e-14!102;UBERON:0002193!2.29e-13!112;UBERON:0002371!3.32e-10!80;UBERON:0001474!9.89e-08!86;UBERON:0002405!1.27e-07!115;UBERON:0004765!1.91e-07!101;UBERON:0001434!1.91e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.22e-14,98;UBERON:0003061,7.22e-14,98;UBERON:0002193,3.94e-13,108;UBERON:0002405,2.42e-10,93;UBERON:0002371,5.26e-10,76;UBERON:0001474,1.67e-07,82 | |||
|phase1_expression=16.5327325136207,8.13581990785736,14.518303621885,12.0087958023756,17.4314826826642,19.1914475302081,7.59899634504932,2.52687949370732,6.00726944859629,3.44027511102112,2.79120467188971,10.4851858622483,6.06664049925443,5.44571953024205,3.31397375727916,16.1358035148426,14.4646686725754,8.76372108464848,11.7103871709722,0.984968464614303,1.42800483870977,0.626909442956176,7.15589967827642,4.51685602740518,4.14290710662849,17.193016293289,19.4578396996371,21.6454648612618,14.9478425202584,33.7769870325547,24.9253958538882,1.83884244895785,3.91567694411725,2.9580320813343,20.4513409531996,8.81449241422014,27.8920417368105,25.4837887924664,27.4745893034094,33.8536958316729,91.5814289641291,87.1273961591055,86.2878151574525,11.0502661472469,12.8477820854195,13.5847074265177,10.4593066607558,12.7462045286766,17.3435567701258,8.34307937734236,11.2710710872804,10.8781825748749,19.9952494827239,20.0100251910986,21.6682378550947,8.47090527941721,11.4620583024295,9.88783331558372,11.0190201253525,14.4418062184242,9.59005688698562,7.91643120448119,9.57425556583833,12.7867425159808,13.930043454172,15.8867862913519,19.9303119678584,8.03995728821578,11.4726242052444,11.2938199246661,12.1079900526674,13.6262725315399,15.8231193720442,10.1402537429732,12.1184450980075,7.96702852931828,16.7369660408278,13.5159203557356,18.3227168834671,7.69534408101371,9.15016715115815,11.6905058409366,17.5996244461323,12.0150494477669,14.2321480618169,8.53460445133014,8.80871171479227,12.0698012390441,11.2377628373427,11.4486450544244,7.39976859842283,10.5702694086769,12.6150165281326,22.4691258584344,26.3439024601322,22.3876472058815,12.5894252872853,5.50215067848831,10.074473450976,95.7978618588586,8.14805666583976,13.7299863663073,17.534405556712,31.6405697553893,7.36514768687093,7.53215241584312,11.6445661418957,44.1915053053579,54.8850446702686,39.1362212956749,40.6234526145197,40.2826289171723,5.78317596332036,8.29376567078111,8.36284190439814,40.9046727138214,8.04763036564035,9.62156847351364,11.8919255249166,14.0168782302603,14.3238359848412,10.4549724889321,24.0920190524436,26.4932285089646,27.4847598415161,14.206635122641,22.1704559168683,24.3944159301926,27.8137803614848,25.923568295021,2.43806866313962,9.38981203585091,5.37022759742827,11.5660528763061,7.52006865953834,10.5737958841401,7.95285947051099,6.32625331393427,6.71197201864882,6.65188192387692,8.95914814069886,11.7881167947941,2.5500670180478,5.19098219898201,48.0330142608931,45.2737316978095,51.0558568392442,22.4181186847021,16.5878524126237,17.08704506116,8.54678351676832,5.16140757063675,4.85996702250632,9.61023501270816,5.03399323451887,8.25354125820202,9.61376846069329,10.5950871259425,24.1921058626963,18.0749130892922,8.86224497640123,10.6438094800592,9.76248230192678,5.14728312484216,5.67099363517232,12.4126622314871,14.8189385933272,17.3421679944316,3.06633274931766,8.54339093611316,9.70969242831159,15.8136500923276,3.87780264148325,5.23312862571041,12.9212707440783,11.143485026483,42.7681654026697,20.9390733146634,8.86670955495893,10.6528744027038,10.6748995729705,8.6333641946006,10.2699641681923,6.87024427555409,9.31732847746715,3.02714855289863,4.60940739583999,1.87457145467037,8.74048215124897,6.27519003698894,5.67904986096844,2.58355897016283,3.0755859429945,3.23036855415172,9.1869377064702,3.56219520204127,5.88956952701863,22.572054288359,15.3305496152705,0.910161361938026,2.87447256726495,7.07011678607078,3.87867411603089,7.75779523355712,8.34057479673592,9.19463387397059,30.3480878991326,6.23877007380116,8.79009214875424,8.96941033037983,12.080118366095,12.0036438433761,8.03809728059823,5.15281080091258,8.37525853492154,12.9957775825775,6.9180273664451,3.02920529092937,8.46859067509154,9.37547129549109,18.1054892183473,9.87370562630875,6.27374191548804,25.8969543238818,28.6383426620376,31.2617008974014,18.2960559194393,19.8794652482228,14.2918549729508,9.43315600639871,16.1485344560402,13.5041622858057,12.5159625863853,18.0107462694008,1.38134921352481,5.10804720835177,5.0531563716871,7.92655560266954,6.74338760312407,8.91740810568883,7.72057809126758,8.49729831960384,9.72809538355496,7.82021587328954,7.06397274451246,8.46443745282059,5.90524363699719,1.40241773803446,3.7041661019826,2.94017422771084,2.53510069643662,9.82827216677626,16.5421173870793,2.20731549707325,10.3310288376215,7.03428022223955,14.0480365323041,2.24803506515239,7.94178882051884,11.9439094254503,0.977424915930974,2.07986957055916,8.6598805215164,3.36198174427723,17.2590780526658,10.8274835820805,6.01881166349594,9.13219930726072,2.37061319387782,10.3018339451385,131.972315262845,81.1994800033155,100.771928031758,24.370796836562,30.2367830757947,18.2889875442679,7.43335738433641,9.00965209393282,5.36735750831296,372.946071087229,177.065400800598,232.000161290124,190.67069837064,243.269169212634,66.863282689654,44.3106573647602,30.4765362746122,15.3965201420435,36.4009324169765,43.2494003295241,55.4503279303322,2.46688385559794,3.05172048183296,3.59357600522655,39.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| |||
|short_description=p1@GNPTAB | |||
}} |
Latest revision as of 19:44, 15 September 2015
Short description: | p1@GNPTAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNPTAB_5end |
Coexpression cluster: | C3217_Mast_Macrophage_acute_Reticulocytes_CD14_granulocyte_Monocytederived |
Association with transcript: | 0bp_to_ENST00000392919, ENST00000547090, ENST00000549940, NM_024312, uc001tit.2, uc001tiu.1, uc001tiw.2_5end |
EntrezGene: | GNPTAB |
HGNC: | 29670 |
UniProt: | Q9BUA5F8W1L9Q3T906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.95e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.67e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-17 | 161 |
hematopoietic cell | 3.69e-16 | 177 |
leukocyte | 9.52e-15 | 136 |
myeloid cell | 3.40e-14 | 108 |
common myeloid progenitor | 3.40e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 5.20e-12 | 120 |
nongranular leukocyte | 9.64e-11 | 115 |
granulocyte monocyte progenitor cell | 2.58e-10 | 67 |
myeloid leukocyte | 5.50e-09 | 72 |
myeloid lineage restricted progenitor cell | 2.95e-08 | 66 |
macrophage dendritic cell progenitor | 1.48e-07 | 61 |
monopoietic cell | 6.94e-07 | 59 |
monocyte | 6.94e-07 | 59 |
monoblast | 6.94e-07 | 59 |
promonocyte | 6.94e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.22e-14 | 98 |
blood island | 7.22e-14 | 98 |
hemolymphoid system | 3.94e-13 | 108 |
immune system | 2.42e-10 | 93 |
bone marrow | 5.26e-10 | 76 |
bone element | 1.67e-07 | 82 |