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FFCP PHASE1:Hg19::chr7:117232534..117232548,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=1080
|EntrezGene=1080
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=1884
|HGNC=1884
|TSSclassifier=strong
|UniProt=Q99904
|UniProt=Q99904
|association_with_transcript=36bp_to_S82430_5end
|association_with_transcript=36bp_to_S82430_5end
|cluster_id=chr7:117232534..117232548,+
|coexpression_cluster_id=C46
|coexpression_cluster_id=C46
|description=CAGE_peak_6_at_CFTR_5end
|description=CAGE_peak_6_at_CFTR_5end
|id=chr7:117232534..117232548,+
|id=chr7:117232534..117232548,+
|ontology_enrichment_celltype=CL:0002178;4.09e-23;3
|ontology_enrichment_celltype=CL:0002563!6.42e-23!4;CL:0002253!2.07e-12!2;CL:0002097!2.59e-12!2;CL:0002251!3.92e-10!21;CL:0002178!9.66e-09!3;CL:0000174!1.21e-08!3;CL:0002076!1.39e-08!43;CL:0002231!1.40e-08!3
|ontology_enrichment_development=
|ontology_enrichment_celltype_v019=CL:0002178;4.09e-23;3
|ontology_enrichment_disease=DOID:3493;7.05e-34;2!DOID:0060058;6.13e-08;10
|ontology_enrichment_celltype_v019_2=CL:0002178,4.09e-23,3
|ontology_enrichment_uberon=UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:3493!1.85e-12!2;DOID:0060058!8.84e-10!10;DOID:3119!2.68e-07!14
|ontology_enrichment_disease_v019=DOID:3493;7.05e-34;2!DOID:0060058;6.13e-08;10
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:0060058,6.13e-08,10
|ontology_enrichment_uberon=UBERON:0001242!6.42e-23!4;UBERON:0001262!6.42e-23!4;UBERON:0004786!6.42e-23!4;UBERON:0004808!6.42e-23!4;UBERON:0001277!6.42e-23!4;UBERON:0003350!1.48e-18!5;UBERON:0000485!9.23e-11!9;UBERON:0002369!1.21e-08!3;UBERON:0001235!1.21e-08!3;UBERON:0006858!1.21e-08!3;UBERON:0000344!2.65e-08!12;UBERON:0000060!2.65e-08!12;UBERON:0001052!7.70e-07!4
|ontology_enrichment_uberon_v019=UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4888508843433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p6@CFTR
|short_description=p6@CFTR
}}
}}

Latest revision as of 19:49, 15 September 2015

Short description:p6@CFTR
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_CFTR_5end
Coexpression cluster:C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel
Association with transcript: 36bp_to_S82430_5end
EntrezGene:CFTR
HGNC: 1884
UniProt: Q99904
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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