FFCP PHASE1:Hg19::chr12:9067338..9067352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1911 | |EntrezGene=1911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3182 | |HGNC=3182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000544916_5end | |association_with_transcript=1bp_to_ENST00000544916_5end | ||
|cluster_id=chr12:9067338..9067352,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_9_at_PHC1_5end | |description=CAGE_peak_9_at_PHC1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.40e-11!42;CL:0000540!3.18e-11!6;CL:0000031!3.18e-11!6;CL:0000404!3.18e-11!6;CL:0000148!4.86e-11!10;CL:0000541!4.86e-11!10;CL:0000860!1.03e-10!45;CL:0000898!5.49e-10!3;CL:0000766!1.54e-08!76;CL:0000047!1.57e-08!8;CL:0000810!5.40e-08!1;CL:0000895!5.40e-08!1;CL:0002436!5.40e-08!1;CL:0002427!5.40e-08!1;CL:0002428!5.40e-08!1;CL:0002429!5.40e-08!1;CL:0002433!5.40e-08!1;CL:0002431!5.40e-08!1;CL:0002432!5.40e-08!1;CL:0000147!6.44e-08!14;CL:0000839!9.45e-08!70;CL:0000557!1.28e-07!71;CL:0002194!4.09e-07!63;CL:0000576!4.09e-07!63;CL:0000040!4.09e-07!63;CL:0000559!4.09e-07!63;CL:0002009!7.40e-07!65 | |ontology_enrichment_celltype=CL:0002057!1.40e-11!42;CL:0000540!3.18e-11!6;CL:0000031!3.18e-11!6;CL:0000404!3.18e-11!6;CL:0000148!4.86e-11!10;CL:0000541!4.86e-11!10;CL:0000860!1.03e-10!45;CL:0000898!5.49e-10!3;CL:0000766!1.54e-08!76;CL:0000047!1.57e-08!8;CL:0000810!5.40e-08!1;CL:0000895!5.40e-08!1;CL:0002436!5.40e-08!1;CL:0002427!5.40e-08!1;CL:0002428!5.40e-08!1;CL:0002429!5.40e-08!1;CL:0002433!5.40e-08!1;CL:0002431!5.40e-08!1;CL:0002432!5.40e-08!1;CL:0000147!6.44e-08!14;CL:0000839!9.45e-08!70;CL:0000557!1.28e-07!71;CL:0002194!4.09e-07!63;CL:0000576!4.09e-07!63;CL:0000040!4.09e-07!63;CL:0000559!4.09e-07!63;CL:0002009!7.40e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.37e-50;6!CL:0000404;5.37e-50;6!CL:0000148;3.59e-14;10!CL:0002319;8.31e-12;25!CL:0000147;2.04e-10;14!CL:0002322;5.92e-08;5!CL:0000710;1.40e-07;20 | |ontology_enrichment_celltype_v019=CL:0000540;5.37e-50;6!CL:0000404;5.37e-50;6!CL:0000148;3.59e-14;10!CL:0002319;8.31e-12;25!CL:0000147;2.04e-10;14!CL:0002322;5.92e-08;5!CL:0000710;1.40e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.37e-50,6;CL:0000031,5.37e-50,6;CL:0000404,5.37e-50,6;CL:0000047,9.18e-38,8;CL:0000148,3.71e-14,10;CL:0000541,3.71e-14,10;CL:0000133,5.41e-14,59;CL:0002319,8.31e-12,25;CL:0000221,1.28e-11,72;CL:0000147,2.08e-10,14;CL:0002322,6.13e-08,5;CL:0000710,1.42e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;5.37e-50;6!CL:0000133;2.69e-09;59 | |ontology_enrichment_development_v019=CL:0000031;5.37e-50;6!CL:0000133;2.69e-09;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p9@PHC1 | |short_description=p9@PHC1 | ||
}} | }} |
Latest revision as of 20:17, 15 September 2015
Short description: | p9@PHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PHC1_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 1bp_to_ENST00000544916_5end |
EntrezGene: | PHC1 |
HGNC: | 3182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.37e-50 | 6 |
neuroblast | 5.37e-50 | 6 |
electrically signaling cell | 5.37e-50 | 6 |
neuronal stem cell | 9.18e-38 | 8 |
melanocyte | 3.71e-14 | 10 |
melanoblast | 3.71e-14 | 10 |
neurectodermal cell | 5.41e-14 | 59 |
neural cell | 8.31e-12 | 25 |
ectodermal cell | 1.28e-11 | 72 |
pigment cell | 2.08e-10 | 14 |
embryonic stem cell | 6.13e-08 | 5 |
neurecto-epithelial cell | 1.42e-07 | 20 |