FFCP PHASE1:Hg19::chr10:102759530..102759541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84445 | |EntrezGene=84445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29381 | |HGNC=29381 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_uc001ksl.2_5end | |association_with_transcript=-66bp_to_uc001ksl.2_5end | ||
|cluster_id=chr10:102759530..102759541,+ | |||
|description=CAGE_peak_5_at_LZTS2_5end | |description=CAGE_peak_5_at_LZTS2_5end | ||
|id=chr10:102759530..102759541,+ | |id=chr10:102759530..102759541,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.65e-14!180;CL:0000183!1.23e-10!59;CL:0000222!3.00e-10!119;CL:0000680!4.86e-09!57;CL:0000056!4.86e-09!57;CL:0000355!4.86e-09!57;CL:0000187!1.08e-08!54;CL:0002321!1.51e-08!248;CL:0000220!1.55e-08!246;CL:0000393!2.09e-07!60;CL:0000211!2.09e-07!60;CL:0000192!8.25e-07!42;CL:0000514!8.25e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.65e-14!180;CL:0000183!1.23e-10!59;CL:0000222!3.00e-10!119;CL:0000680!4.86e-09!57;CL:0000056!4.86e-09!57;CL:0000355!4.86e-09!57;CL:0000187!1.08e-08!54;CL:0002321!1.51e-08!248;CL:0000220!1.55e-08!246;CL:0000393!2.09e-07!60;CL:0000211!2.09e-07!60;CL:0000192!8.25e-07!42;CL:0000514!8.25e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002494;7.11e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.97e-09,121;CL:0000680,6.57e-08,58;CL:0000056,6.57e-08,58;CL:0000355,6.57e-08,58;CL:0000187,8.65e-08,55;CL:0000192,1.52e-07,43;CL:0000514,1.52e-07,43;CL:0002494,2.68e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.86e-13!659;UBERON:0000477!7.94e-12!286;UBERON:0000481!1.16e-11!347;UBERON:0000119!2.61e-11!312;UBERON:0000483!5.09e-11!309;UBERON:0000467!9.07e-10!625;UBERON:0000480!1.48e-09!626;UBERON:0000475!2.52e-09!365;UBERON:0000922!5.59e-09!612;UBERON:0004111!1.05e-08!241;UBERON:0002049!1.16e-08!79;UBERON:0007798!1.16e-08!79;UBERON:0000923!2.45e-08!604;UBERON:0005291!2.45e-08!604;UBERON:0006598!2.45e-08!604;UBERON:0002532!2.45e-08!604;UBERON:0004872!2.62e-08!84;UBERON:0002385!3.25e-08!63;UBERON:0001015!3.25e-08!63;UBERON:0000383!3.25e-08!63;UBERON:0002050!3.83e-08!605;UBERON:0005423!3.83e-08!605;UBERON:0000486!6.18e-08!82;UBERON:0001134!1.06e-07!61;UBERON:0002036!1.06e-07!61;UBERON:0003082!1.06e-07!61;UBERON:0003103!1.54e-07!69;UBERON:0000025!1.64e-07!194;UBERON:0000914!4.15e-07!83;UBERON:0002329!4.15e-07!83;UBERON:0003077!4.15e-07!83;UBERON:0003059!4.15e-07!83;UBERON:0007282!4.15e-07!83;UBERON:0009618!4.15e-07!83;UBERON:0007285!4.15e-07!83;UBERON:0005256!6.62e-07!143;UBERON:0003914!9.97e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.00e-08,83;UBERON:0001009,5.60e-08,112;UBERON:0004535,6.89e-08,109;UBERON:0002049,9.69e-08,78;UBERON:0007798,9.69e-08,78;UBERON:0002385,2.15e-07,64;UBERON:0001015,2.15e-07,64;UBERON:0000383,2.15e-07,64;UBERON:0003914,2.70e-07,117;UBERON:0007503,3.53e-07,78;UBERON:0000486,4.21e-07,83;UBERON:0001134,5.73e-07,62;UBERON:0002036,5.73e-07,62;UBERON:0003082,5.73e-07,62 | |||
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| ||
|short_description=p5@LZTS2 | |short_description=p5@LZTS2 | ||
}} | }} |
Latest revision as of 22:30, 15 September 2015
Short description: | p5@LZTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LZTS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_uc001ksl.2_5end |
EntrezGene: | LZTS2 |
HGNC: | 29381 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.97e-09 | 121 |
muscle precursor cell | 6.57e-08 | 58 |
myoblast | 6.57e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.57e-08 | 58 |
muscle cell | 8.65e-08 | 55 |
smooth muscle cell | 1.52e-07 | 43 |
smooth muscle myoblast | 1.52e-07 | 43 |
cardiocyte | 2.68e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.00e-08 | 83 |
circulatory system | 5.60e-08 | 112 |
cardiovascular system | 6.89e-08 | 109 |
vasculature | 9.69e-08 | 78 |
vascular system | 9.69e-08 | 78 |
muscle tissue | 2.15e-07 | 64 |
musculature | 2.15e-07 | 64 |
musculature of body | 2.15e-07 | 64 |
epithelial tube | 2.70e-07 | 117 |
epithelial vesicle | 3.53e-07 | 78 |
multilaminar epithelium | 4.21e-07 | 83 |
skeletal muscle tissue | 5.73e-07 | 62 |
striated muscle tissue | 5.73e-07 | 62 |
myotome | 5.73e-07 | 62 |