FFCP PHASE2:Hg19::chr12:10460438..10460485,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3824 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6378 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6378 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13241,Q53ZY6 | ||
|association_with_transcript=21bp_to_ENST00000336164,ENST00000350274,ENST00000381908,NM_002262,NM_007334,uc001qxx.3,uc001qxy.3,uc009zhh.2,uc009zhi.2_5end | |association_with_transcript=21bp_to_ENST00000336164,ENST00000350274,ENST00000381908,NM_002262,NM_007334,uc001qxx.3,uc001qxy.3,uc009zhh.2,uc009zhi.2_5end | ||
|cluster_id=chr12:10460438..10460485,+ | |cluster_id=chr12:10460438..10460485,+ | ||
Latest revision as of 23:43, 15 September 2015
| Short description: | p1@KLRD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_KLRD1_5end |
| Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
| Association with transcript: | 21bp_to_ENST00000336164, ENST00000350274, ENST00000381908, NM_002262, NM_007334, uc001qxx.3, uc001qxy.3, uc009zhh.2, uc009zhi.2_5end |
| EntrezGene: | KLRD1 |
| HGNC: | 6378 |
| UniProt: | Q13241Q53ZY6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@KLRD1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 3.44e-22 | 136 |
| CD8-positive, alpha-beta T cell | 7.27e-19 | 11 |
| nongranular leukocyte | 9.65e-18 | 115 |
| hematopoietic stem cell | 1.03e-14 | 168 |
| mature alpha-beta T cell | 3.55e-14 | 18 |
| alpha-beta T cell | 3.55e-14 | 18 |
| immature T cell | 3.55e-14 | 18 |
| mature T cell | 3.55e-14 | 18 |
| immature alpha-beta T cell | 3.55e-14 | 18 |
| hematopoietic lineage restricted progenitor cell | 2.01e-13 | 120 |
Showing 1 to 10 of 29 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.42e-22 | 114 |
| hematopoietic system | 7.69e-16 | 98 |
| blood island | 7.69e-16 | 98 |
| hemolymphoid system | 4.05e-15 | 108 |
| blood | 8.75e-15 | 15 |
| haemolymphatic fluid | 8.75e-15 | 15 |
| organism substance | 8.75e-15 | 15 |
| immune system | 1.97e-07 | 93 |
| hemopoietic organ | 2.38e-07 | 7 |
| immune organ | 2.38e-07 | 7 |
Showing 1 to 10 of 10 entries
