FFCP PHASE1:Hg19::chr10:103874747..103874767,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8861 | |EntrezGene=8861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6532 | |HGNC=6532 | ||
|TSSclassifier=strong | |||
|UniProt=Q86U70 | |UniProt=Q86U70 | ||
|association_with_transcript=-24bp_to_NM_003893,uc001kuk.3,uc001kul.3_5end | |association_with_transcript=-24bp_to_NM_003893,uc001kuk.3,uc001kul.3_5end | ||
|cluster_id=chr10:103874747..103874767,- | |||
|coexpression_cluster_id=C1102 | |||
|description=CAGE_peak_2_at_LDB1_5end | |description=CAGE_peak_2_at_LDB1_5end | ||
|id=chr10:103874747..103874767,- | |id=chr10:103874747..103874767,- | ||
|ontology_enrichment_celltype=CL:0002321!8.63e-21!248;CL:0000220!5.10e-20!246;CL:0000012!1.89e-17!682;CL:0000548!3.88e-16!679;CL:0000004!3.88e-16!679;CL:0000255!3.88e-16!679;CL:0000144!1.37e-15!625;CL:0000066!5.61e-15!254;CL:0000003!7.06e-15!722;CL:0002371!5.61e-12!591;CL:0000076!4.40e-09!62;CL:0000055!1.84e-08!180;CL:0000221!1.05e-07!71;CL:0002076!2.50e-07!43;CL:0000222!4.11e-07!119;CL:0000071!5.15e-07!18;CL:0002546!5.15e-07!18 | |ontology_enrichment_celltype=CL:0002321!8.63e-21!248;CL:0000220!5.10e-20!246;CL:0000012!1.89e-17!682;CL:0000548!3.88e-16!679;CL:0000004!3.88e-16!679;CL:0000255!3.88e-16!679;CL:0000144!1.37e-15!625;CL:0000066!5.61e-15!254;CL:0000003!7.06e-15!722;CL:0002371!5.61e-12!591;CL:0000076!4.40e-09!62;CL:0000055!1.84e-08!180;CL:0000221!1.05e-07!71;CL:0002076!2.50e-07!43;CL:0000222!4.11e-07!119;CL:0000071!5.15e-07!18;CL:0002546!5.15e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000071;6.94e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.73e-21,250;CL:0000066,1.09e-14,253;CL:0000076,8.71e-09,63;CL:0002076,1.34e-07,42;CL:0000221,1.59e-07,72;CL:0000222,2.38e-07,121;CL:0000071,5.13e-07,18;CL:0002546,5.13e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;6.94e-07;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.02e-07!79;UBERON:0007798!5.02e-07!79;UBERON:0001986!5.15e-07!18;UBERON:0004638!5.15e-07!18;UBERON:0004852!5.15e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.94e-07;18!UBERON:0001986;6.94e-07;18!UBERON:0004852;6.94e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.51e-07,78;UBERON:0007798,2.51e-07,78;UBERON:0004638,5.13e-07,18;UBERON:0001986,5.13e-07,18;UBERON:0004852,5.13e-07,18;UBERON:0000153,5.82e-07,62;UBERON:0007811,5.82e-07,62 | |||
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| ||
|short_description=p2@LDB1 | |short_description=p2@LDB1 | ||
}} | }} |
Latest revision as of 00:00, 16 September 2015
Short description: | p2@LDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDB1_5end |
Coexpression cluster: | C1102_acute_chronic_leukemia_Reticulocytes_dura_bone_Fibroblast |
Association with transcript: | -24bp_to_NM_003893, uc001kuk.3, uc001kul.3_5end |
EntrezGene: | LDB1 |
HGNC: | 6532 |
UniProt: | Q86U70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.73e-21 | 250 |
epithelial cell | 1.09e-14 | 253 |
squamous epithelial cell | 8.71e-09 | 63 |
endo-epithelial cell | 1.34e-07 | 42 |
ectodermal cell | 1.59e-07 | 72 |
mesodermal cell | 2.38e-07 | 121 |
blood vessel endothelial cell | 5.13e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.13e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.51e-07 | 78 |
vascular system | 2.51e-07 | 78 |
blood vessel endothelium | 5.13e-07 | 18 |
endothelium | 5.13e-07 | 18 |
cardiovascular system endothelium | 5.13e-07 | 18 |
anterior region of body | 5.82e-07 | 62 |
craniocervical region | 5.82e-07 | 62 |