FFCP PHASE1:Hg19::chr20:35807714..35807756,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10382 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JYR7,F2Z3K5 | |||
|association_with_transcript=0bp_to_ENST00000373632,ENST00000462163_5end | |||
|cluster_id=chr20:35807714..35807756,+ | |||
|coexpression_cluster_id=C3113 | |||
|description=CAGE_peak_1_at_RPN2_5end | |||
|id=chr20:35807714..35807756,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.53e-29!679;CL:0000004!2.53e-29!679;CL:0000255!2.53e-29!679;CL:0000012!4.81e-29!682;CL:0000144!1.06e-19!625;CL:0000003!3.51e-18!722;CL:0000063!4.55e-15!578;CL:0000055!1.36e-14!180;CL:0002371!4.68e-14!591;CL:0000057!8.82e-12!75;CL:0000048!9.63e-11!430;CL:0000723!3.63e-10!436;CL:0000034!1.36e-09!444;CL:0000220!2.64e-07!246;CL:0002321!3.99e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.80e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.89e-12,76;CL:0000048,5.67e-10,427;CL:0000723,2.03e-09,433;CL:0000034,7.21e-09,441;CL:0002321,5.53e-07,250;CL:0000066,8.31e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-14!239;DOID:162!3.05e-14!235;DOID:0050687!2.81e-09!143;DOID:305!7.17e-08!106;DOID:2394!1.32e-07!14;DOID:120!6.40e-07!27;DOID:193!8.28e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-07;14!DOID:120;6.31e-07;27!DOID:193;8.11e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.26e-14,239;DOID:162,3.05e-14,235;DOID:0050687,2.81e-09,143;DOID:305,7.17e-08,106;DOID:2394,1.32e-07,14;DOID:120,6.40e-07,27;DOID:193,8.28e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.72e-08!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.12e-08,148 | |||
|phase1_expression=146.069416933528,114.543780281676,168.440512894686,175.128272117978,181.466204337479,211.105922832289,146.91392933762,125.080534938513,91.1537842417436,72.0000433949421,23.0274385430901,114.46327899621,75.1735887951093,119.310764253485,121.622836892145,141.188280754873,172.370635014857,172.35318133142,156.626428411753,87.4159512345194,57.7321956221236,47.0182082217132,95.0303477275108,85.6833900956255,104.577018782471,59.4496296719061,62.8890515186584,57.2227380150448,66.0851985106159,59.493556705068,96.9148931958636,44.1322187749885,63.855654780989,78.0180961451922,73.0515701472244,100.513647368607,76.3361142270603,71.4654077006122,63.3720454005648,62.7161416368812,95.3879920262078,87.1273961591055,76.4999435873534,46.5274364094607,51.0132523979893,39.7837860348019,47.183094491854,47.6954750105318,60.7024486954403,58.1138632490744,40.729552338127,65.5055776791381,49.2986323453365,42.6019891165325,58.233389235567,53.6490667696423,48.8502008603544,58.6528294401671,61.2167784741805,45.8928508718814,54.9829928187175,34.3045352194185,51.0626963511378,57.5403413219137,69.6502172708602,41.4191214024532,56.0540024096018,51.5059763776324,56.3201551893818,62.5503872750736,71.4371413107375,52.2954243102342,65.5077142002631,73.3055843502438,70.1594189884644,80.0896025841996,70.7670376222919,72.385262349606,48.217676009124,49.0221919234948,58.4815030965325,64.6631104326804,52.7988733383968,46.4217819572812,48.033499708632,49.9274360402813,44.8443505480334,53.4519769157669,50.9004552044344,51.5189027449097,40.4141208067708,51.0896354752717,46.2550606031527,44.9382517168688,47.6432278534306,122.736983505186,52.3247988502796,40.0870978004148,47.6995477678861,72.2245660087729,52.4734849280081,42.610302516126,62.3445530905316,103.723135360097,57.4481519575933,72.4415835288441,58.7644384370084,64.1737511825633,70.8823444201336,66.2684755552815,70.4692545353913,78.5366362341992,54.2728821173141,61.8019312887237,68.9934457112847,77.3902810624377,54.4173100914728,59.1039206230123,66.2911593091097,56.067512921041,60.5507612086469,65.5811910669378,58.5737213212536,65.0171984664445,57.4681342140791,53.0381044578598,44.3409118337365,72.1752140744542,56.9647617018871,47.5024044735581,65.8278539047697,150.907693433318,196.65262011535,164.816253487362,72.1926591315681,121.091689851249,152.694901833811,171.295474346528,79.5983160521451,84.4789004332369,105.753081974524,64.70366329587,46.9940921897379,53.0221753181734,73.0231635723037,65.821040699123,86.5556322977812,169.566833881098,196.766249308364,197.243933205999,64.5977823941791,89.4643978910369,71.858083832772,53.1389465408569,114.523346085304,129.030361669892,86.3149211797028,92.7716165417891,118.470165474675,152.967320033454,128.905381474927,92.7531968976585,85.9098442569557,136.403002808317,130.432853608963,100.997992689294,58.6021662554303,61.2606453829273,91.9899824795299,91.1295033185404,74.0135045478845,7.9068250461638,11.6334079244498,68.4667661863779,167.479547721322,169.811516142201,209.603733227325,598.341190882025,124.843270533822,84.1016400213461,98.2090760713286,154.413885309142,116.081716204113,120.97018351858,119.981036885279,166.03909812649,76.0552220313598,84.121394028333,92.7115428186052,57.0471821544449,87.1285807617,99.8193238472002,95.1812912884613,96.9110566245515,124.942352807995,83.4045014546904,97.1262343052195,142.560342873846,102.86304257988,93.7466202796167,30.181961956282,100.159987802669,96.5914973411563,146.289852975649,87.7955241761676,89.1879485775147,112.227830003228,142.697686415306,226.389720239344,188.357616937976,135.42448484096,389.818333813639,162.101628492064,224.662550919789,193.375413728522,343.122283446494,188.053419961113,191.344800877039,98.4933915472603,86.803932511702,510.503794038891,191.126730337834,151.926290710197,55.6591257110295,104.734510306881,62.2365971994138,70.9886969674245,64.1444078675989,71.4592748647538,63.1295825043606,85.2844475959624,85.0397246646684,107.950177307573,110.637441369176,46.9658732598434,62.6896702843172,91.6786941720374,119.489868040242,107.894201649985,121.951581121042,113.933673832563,142.493156436434,131.685193606659,119.865032954386,129.898609912979,110.037686886668,86.3641881910838,32.2556079747925,95.4851706288848,73.504355692771,100.136477509246,87.4716222843087,106.932973109334,96.6804187718085,227.52861130476,165.906072558674,72.6546889405101,73.0611396174527,63.3332526193274,84.7184273200546,92.5295587081322,79.035043681248,131.341521242999,119.524247529304,195.955110679586,94.9931226267866,106.023682380044,99.6931757709295,34.7689935102081,54.9431143740718,120.892549988912,148.358704098277,100.920559194046,87.1724656077026,132.873863405298,98.1083672917314,103.260976676384,94.4560300170376,70.5424129663989,115.775860905547,86.9038043710541,43.5389042635621,42.3712663045867,33.0755175577115,124.900358072697,67.6119513238151,90.2574343517362,87.2469474715797,75.8866896150527,88.0005159482678,115.759705215384,133.884514708361,179.179588290478,115.434461882175,199.98334427728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| |||
|short_description=p1@RPN2 | |||
}} |
Latest revision as of 00:41, 16 September 2015
Short description: | p1@RPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPN2_5end |
Coexpression cluster: | C3113_Smooth_Fibroblast_lymphangiectasia_colon_gall_mesenchymal_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000373632, ENST00000462163_5end |
EntrezGene: | RPN2 |
HGNC: | 10382 |
UniProt: | Q5JYR7F2Z3K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.89e-12 | 76 |
multi fate stem cell | 5.67e-10 | 427 |
somatic stem cell | 2.03e-09 | 433 |
stem cell | 7.21e-09 | 441 |
embryonic cell | 5.53e-07 | 250 |
epithelial cell | 8.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 4.12e-08 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.26e-14 | 239 |
cancer | 3.05e-14 | 235 |
cell type cancer | 2.81e-09 | 143 |
carcinoma | 7.17e-08 | 106 |
ovarian cancer | 1.32e-07 | 14 |
female reproductive organ cancer | 6.40e-07 | 27 |
reproductive organ cancer | 8.28e-07 | 29 |