FFCP PHASE1:Hg19::chr1:110950255..110950330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10542 | |EntrezGene=10542 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17955 | |HGNC=17955 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLX3 | |UniProt=E9PLX3 | ||
|association_with_transcript=0bp_to_ENST00000464240,ENST00000474861,ENST00000483260,ENST00000531779_5end | |association_with_transcript=0bp_to_ENST00000464240,ENST00000474861,ENST00000483260,ENST00000531779_5end | ||
|cluster_id=chr1:110950255..110950330,- | |||
|description=CAGE_peak_1_at_HBXIP_5end | |description=CAGE_peak_1_at_HBXIP_5end | ||
|id=chr1:110950255..110950330,- | |id=chr1:110950255..110950330,- | ||
|ontology_enrichment_celltype=CL:0000144!2.14e-21!625;CL:0000012!1.16e-20!682;CL:0000548!3.33e-20!679;CL:0000004!3.33e-20!679;CL:0000255!3.33e-20!679;CL:0000003!4.79e-19!722;CL:0002371!2.83e-18!591;CL:0000048!6.58e-16!430;CL:0000723!5.38e-15!436;CL:0000034!3.16e-14!444;CL:0000063!4.21e-09!578;CL:0002320!6.57e-09!365;CL:0000134!3.90e-08!358;CL:0000680!7.98e-08!57;CL:0000056!7.98e-08!57;CL:0000355!7.98e-08!57;CL:0000219!1.57e-07!390;CL:0000192!3.67e-07!42;CL:0000514!3.67e-07!42;CL:0000222!4.05e-07!119;CL:0000187!4.85e-07!54;CL:0000183!9.78e-07!59 | |ontology_enrichment_celltype=CL:0000144!2.14e-21!625;CL:0000012!1.16e-20!682;CL:0000548!3.33e-20!679;CL:0000004!3.33e-20!679;CL:0000255!3.33e-20!679;CL:0000003!4.79e-19!722;CL:0002371!2.83e-18!591;CL:0000048!6.58e-16!430;CL:0000723!5.38e-15!436;CL:0000034!3.16e-14!444;CL:0000063!4.21e-09!578;CL:0002320!6.57e-09!365;CL:0000134!3.90e-08!358;CL:0000680!7.98e-08!57;CL:0000056!7.98e-08!57;CL:0000355!7.98e-08!57;CL:0000219!1.57e-07!390;CL:0000192!3.67e-07!42;CL:0000514!3.67e-07!42;CL:0000222!4.05e-07!119;CL:0000187!4.85e-07!54;CL:0000183!9.78e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,9.61e-16,427;CL:0000723,7.80e-15,433;CL:0000034,4.57e-14,441;CL:0002320,8.72e-09,361;CL:0000134,5.09e-08,354;CL:0000680,9.12e-08,58;CL:0000056,9.12e-08,58;CL:0000355,9.12e-08,58;CL:0000219,2.07e-07,386;CL:0000222,2.49e-07,121;CL:0000192,4.39e-07,43;CL:0000514,4.39e-07,43;CL:0000187,5.47e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.76e-08!83;UBERON:0002329!2.76e-08!83;UBERON:0003077!2.76e-08!83;UBERON:0003059!2.76e-08!83;UBERON:0007282!2.76e-08!83;UBERON:0009618!2.76e-08!83;UBERON:0007285!2.76e-08!83;UBERON:0002384!5.04e-08!375;UBERON:0000486!5.51e-08!82;UBERON:0001134!1.15e-07!61;UBERON:0002036!1.15e-07!61;UBERON:0003082!1.15e-07!61;UBERON:0004290!2.66e-07!70;UBERON:0002204!4.28e-07!167;UBERON:0002385!9.70e-07!63;UBERON:0001015!9.70e-07!63;UBERON:0000383!9.70e-07!63 | |ontology_enrichment_uberon=UBERON:0000914!2.76e-08!83;UBERON:0002329!2.76e-08!83;UBERON:0003077!2.76e-08!83;UBERON:0003059!2.76e-08!83;UBERON:0007282!2.76e-08!83;UBERON:0009618!2.76e-08!83;UBERON:0007285!2.76e-08!83;UBERON:0002384!5.04e-08!375;UBERON:0000486!5.51e-08!82;UBERON:0001134!1.15e-07!61;UBERON:0002036!1.15e-07!61;UBERON:0003082!1.15e-07!61;UBERON:0004290!2.66e-07!70;UBERON:0002204!4.28e-07!167;UBERON:0002385!9.70e-07!63;UBERON:0001015!9.70e-07!63;UBERON:0000383!9.70e-07!63 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,5.95e-08,83;UBERON:0002384,6.64e-08,371;UBERON:0001134,1.29e-07,62;UBERON:0002036,1.29e-07,62;UBERON:0003082,1.29e-07,62;UBERON:0002204,1.37e-07,167;UBERON:0002329,2.89e-07,71;UBERON:0003059,2.89e-07,71;UBERON:0007282,2.89e-07,71;UBERON:0004290,2.89e-07,71;UBERON:0009618,2.89e-07,71;UBERON:0003077,5.36e-07,72;UBERON:0007285,5.36e-07,72;UBERON:0007524,6.23e-07,73 | |||
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| ||
|short_description=p1@HBXIP | |short_description=p1@HBXIP | ||
}} | }} |
Latest revision as of 00:47, 16 September 2015
Short description: | p1@HBXIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HBXIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464240, ENST00000474861, ENST00000483260, ENST00000531779_5end |
EntrezGene: | HBXIP |
HGNC: | 17955 |
UniProt: | E9PLX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 9.61e-16 | 427 |
somatic stem cell | 7.80e-15 | 433 |
stem cell | 4.57e-14 | 441 |
connective tissue cell | 8.72e-09 | 361 |
mesenchymal cell | 5.09e-08 | 354 |
muscle precursor cell | 9.12e-08 | 58 |
myoblast | 9.12e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.12e-08 | 58 |
motile cell | 2.07e-07 | 386 |
mesodermal cell | 2.49e-07 | 121 |
smooth muscle cell | 4.39e-07 | 43 |
smooth muscle myoblast | 4.39e-07 | 43 |
muscle cell | 5.47e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 5.95e-08 | 83 |
connective tissue | 6.64e-08 | 371 |
skeletal muscle tissue | 1.29e-07 | 62 |
striated muscle tissue | 1.29e-07 | 62 |
myotome | 1.29e-07 | 62 |
musculoskeletal system | 1.37e-07 | 167 |
somite | 2.89e-07 | 71 |
presomitic mesoderm | 2.89e-07 | 71 |
presumptive segmental plate | 2.89e-07 | 71 |
dermomyotome | 2.89e-07 | 71 |
trunk paraxial mesoderm | 2.89e-07 | 71 |
paraxial mesoderm | 5.36e-07 | 72 |
presumptive paraxial mesoderm | 5.36e-07 | 72 |
dense mesenchyme tissue | 6.23e-07 | 73 |