FFCP PHASE1:Hg19::chr1:226496898..226496907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286826 | |EntrezGene=286826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30830 | |HGNC=30830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000460719_5end | |association_with_transcript=-25bp_to_ENST00000460719_5end | ||
|cluster_id=chr1:226496898..226496907,- | |||
|description=CAGE_peak_3_at_LIN9_5end | |description=CAGE_peak_3_at_LIN9_5end | ||
|id=chr1:226496898..226496907,- | |id=chr1:226496898..226496907,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;7.07e-34;2!CL:0000558;7.07e-34;2!CL:0002601;7.36e-18;1!CL:0000047;7.97e-10;2!CL:0002328;8.14e-07;3 | |ontology_enrichment_celltype_v019=CL:0000764;7.07e-34;2!CL:0000558;7.07e-34;2!CL:0002601;7.36e-18;1!CL:0000047;7.97e-10;2!CL:0002328;8.14e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.39e-34,2;CL:0000765,8.39e-34,2;CL:0000050,8.39e-34,2;CL:0000038,8.39e-34,2;CL:0000558,8.39e-34,2;CL:0000547,8.39e-34,2;CL:0000549,8.39e-34,2;CL:0000550,8.39e-34,2;CL:0000552,8.39e-34,2;CL:0002601,1.70e-17,1;CL:0002328,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.47e-07;10!UBERON:0007687;1.47e-07;10 | |ontology_enrichment_development_v019=UBERON:0003918;1.47e-07;10!UBERON:0007687;1.47e-07;10 | ||
|ontology_enrichment_disease=DOID:162!7.22e-26!235;DOID:14566!6.96e-25!239;DOID:0050687!4.13e-18!143;DOID:305!1.09e-14!106;DOID:0050686!2.68e-10!137 | |ontology_enrichment_disease=DOID:162!7.22e-26!235;DOID:14566!6.96e-25!239;DOID:0050687!4.13e-18!143;DOID:305!1.09e-14!106;DOID:0050686!2.68e-10!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.14e-07;3!UBERON:0002031;8.14e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004815;8.14e-07;3!UBERON:0002031;8.14e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.50e-07,3;UBERON:0002031,6.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,1.83884244895785,0,0,0.232401601740905,0.142169232487422,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.505008341862199,0,0,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0,0,0,0.206105058476878,0.257640540045629,0,0,0.194874010322397,0.504867548488229,0,0,0,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0.487894824518382,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0,0.12624243342638,0.380987365753014,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.581051892299796,0.362578348774867,0,0,0.34444334449382,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,1.31555925987561,1.5686127061494,0.256450125116389,0,0.325378394664303,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0.178064071293475,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0.490080431962063,0.371606350251437,0.144269212976445,0,0,0.399158742865633,0,0.423347165447766,0,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0,0.614481528616916,1.3420566473545,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0.445234820091624,0.329607748453519,0,0,0,0.755798243562828,0.409074730008619,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,0.694499979733169,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0.21787692703798,0,0,0,0.46112780877612,0.897576444097721,0.108647371922008,0.31900115973192,0,0,0,0.784901281975124,0.498635045700469,0.451191321234361,0.588187602953219,0.167821586975843,0.948768663620925,0.317873157960757,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,0.182454789215666,0.586993856796269,0.485560759068186,0,0,0,0.189559738885464,1.80388103297391,1.55532287095871,0,0,0,0,0.284609546029793,0.138674673013139,0,0.489961987071888,0.34823682632161,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.193978032976839,0,0,0.137041924646751,0.794858446811959,0,0,0.240476460754601,0,0.39961921916426,0.288180834308212,0.114536596165916,0.171594997861965,0,0.124252535565433,0.235694034616795,0.271808412147228,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.940568614814168,0,0,0,0.247247575143499,0.13480708770837,0.196854963029498,0.0846733320657845,0.795229689809303,0.136203406111576,0.643012593860077,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.314408610199332,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0.332787154610557,0,1.798532254171,0.249960815924213,0.151649117541648,0.285465333544967,0,0,0.28984205722165,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0,0.176689145945881,0,0.16894244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| ||
|short_description=p3@LIN9 | |short_description=p3@LIN9 | ||
}} | }} |
Latest revision as of 01:30, 16 September 2015
Short description: | p3@LIN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIN9_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000460719_5end |
EntrezGene: | LIN9 |
HGNC: | 30830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.39e-34 | 2 |
erythroblast | 8.39e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 8.39e-34 | 2 |
erythroid progenitor cell | 8.39e-34 | 2 |
reticulocyte | 8.39e-34 | 2 |
proerythroblast | 8.39e-34 | 2 |
basophilic erythroblast | 8.39e-34 | 2 |
polychromatophilic erythroblast | 8.39e-34 | 2 |
orthochromatic erythroblast | 8.39e-34 | 2 |
uterine smooth muscle cell | 1.70e-17 | 1 |
bronchial epithelial cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.50e-07 | 3 |
epithelium of bronchus | 6.50e-07 | 3 |