FFCP PHASE1:Hg19::chr2:109605663..109605718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10913 | |EntrezGene=10913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2895 | |HGNC=2895 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC98 | |UniProt=E9PC98 | ||
|association_with_transcript=6bp_to_ENST00000409271_5end | |association_with_transcript=6bp_to_ENST00000409271_5end | ||
|cluster_id=chr2:109605663..109605718,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_EDAR_5end | |description=CAGE_peak_1_at_EDAR_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.18e-16!18;CL:0000789!2.18e-16!18;CL:0002420!2.18e-16!18;CL:0002419!2.18e-16!18;CL:0000790!2.18e-16!18;CL:0000625!2.07e-12!11;CL:0000084!2.15e-10!25;CL:0000827!2.15e-10!25;CL:0002076!3.06e-07!43;CL:0000624!7.23e-07!6;CL:0002251!9.31e-07!21 | |ontology_enrichment_celltype=CL:0000791!2.18e-16!18;CL:0000789!2.18e-16!18;CL:0002420!2.18e-16!18;CL:0002419!2.18e-16!18;CL:0000790!2.18e-16!18;CL:0000625!2.07e-12!11;CL:0000084!2.15e-10!25;CL:0000827!2.15e-10!25;CL:0002076!3.06e-07!43;CL:0000624!7.23e-07!6;CL:0002251!9.31e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.52e-32;18!CL:0000789;3.52e-32;18!CL:0002419;3.52e-32;18!CL:0000084;2.72e-22;25!CL:0000625;2.95e-20;11!CL:0000624;7.96e-16;6!CL:0000226;4.49e-12;3!CL:0000842;4.49e-12;3!CL:0000623;5.19e-11;3!CL:0000542;8.68e-07;53 | |ontology_enrichment_celltype_v019=CL:0000791;3.52e-32;18!CL:0000789;3.52e-32;18!CL:0002419;3.52e-32;18!CL:0000084;2.72e-22;25!CL:0000625;2.95e-20;11!CL:0000624;7.96e-16;6!CL:0000226;4.49e-12;3!CL:0000842;4.49e-12;3!CL:0000623;5.19e-11;3!CL:0000542;8.68e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.04e-32,18;CL:0000789,2.04e-32,18;CL:0002420,2.04e-32,18;CL:0002419,2.04e-32,18;CL:0000790,2.04e-32,18;CL:0000084,1.86e-22,25;CL:0000827,1.86e-22,25;CL:0000625,1.84e-20,11;CL:0000624,7.30e-16,6;CL:0000838,3.13e-14,52;CL:0000542,6.86e-14,53;CL:0000051,6.86e-14,53;CL:0000226,5.12e-12,3;CL:0000842,5.12e-12,3;CL:0000623,8.05e-11,3;CL:0000825,8.05e-11,3;CL:0002087,1.13e-09,115;CL:0000738,2.02e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.52e-32;18!CL:0000051;8.68e-07;53 | |ontology_enrichment_development_v019=CL:0000790;3.52e-32;18!CL:0000051;8.68e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.36e-12!15;UBERON:0000179!1.36e-12!15;UBERON:0000463!1.36e-12!15;UBERON:0007023!2.09e-12!115;UBERON:0004119!8.62e-10!169;UBERON:0000925!8.62e-10!169;UBERON:0006595!8.62e-10!169;UBERON:0001007!1.16e-08!155;UBERON:0001555!1.16e-08!155;UBERON:0007026!1.16e-08!155;UBERON:0004921!1.57e-08!129;UBERON:0004185!1.57e-08!129;UBERON:0000974!8.79e-08!10 | |ontology_enrichment_uberon=UBERON:0000178!1.36e-12!15;UBERON:0000179!1.36e-12!15;UBERON:0000463!1.36e-12!15;UBERON:0007023!2.09e-12!115;UBERON:0004119!8.62e-10!169;UBERON:0000925!8.62e-10!169;UBERON:0006595!8.62e-10!169;UBERON:0001007!1.16e-08!155;UBERON:0001555!1.16e-08!155;UBERON:0007026!1.16e-08!155;UBERON:0004921!1.57e-08!129;UBERON:0004185!1.57e-08!129;UBERON:0000974!8.79e-08!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-27;15!UBERON:0000179;2.63e-27;15!UBERON:0000463;2.63e-27;15!UBERON:0002390;2.06e-12;32!UBERON:0002193;5.10e-10;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-27;15!UBERON:0000179;2.63e-27;15!UBERON:0000463;2.63e-27;15!UBERON:0002390;2.06e-12;32!UBERON:0002193;5.10e-10;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.76e-27,15;UBERON:0000179,2.76e-27,15;UBERON:0000463,2.76e-27,15 | |||
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|short_description=p1@EDAR | |short_description=p1@EDAR | ||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p1@EDAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EDAR_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 6bp_to_ENST00000409271_5end |
EntrezGene: | EDAR |
HGNC: | 2895 |
UniProt: | E9PC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-32 | 18 |
alpha-beta T cell | 2.04e-32 | 18 |
immature T cell | 2.04e-32 | 18 |
mature T cell | 2.04e-32 | 18 |
immature alpha-beta T cell | 2.04e-32 | 18 |
T cell | 1.86e-22 | 25 |
pro-T cell | 1.86e-22 | 25 |
CD8-positive, alpha-beta T cell | 1.84e-20 | 11 |
CD4-positive, alpha-beta T cell | 7.30e-16 | 6 |
lymphoid lineage restricted progenitor cell | 3.13e-14 | 52 |
lymphocyte | 6.86e-14 | 53 |
common lymphoid progenitor | 6.86e-14 | 53 |
single nucleate cell | 5.12e-12 | 3 |
mononuclear cell | 5.12e-12 | 3 |
natural killer cell | 8.05e-11 | 3 |
pro-NK cell | 8.05e-11 | 3 |
nongranular leukocyte | 1.13e-09 | 115 |
leukocyte | 2.02e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 2.76e-27 | 15 |
haemolymphatic fluid | 2.76e-27 | 15 |
organism substance | 2.76e-27 | 15 |