FFCP PHASE1:Hg19::chr20:42543441..42543497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84969 | |EntrezGene=84969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16095 | |HGNC=16095 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAC7 | |UniProt=G3XAC7 | ||
|association_with_transcript=0bp_to_ENST00000341197,ENST00000372992,NM_001098797,uc010ggo.2_5end | |association_with_transcript=0bp_to_ENST00000341197,ENST00000372992,NM_001098797,uc010ggo.2_5end | ||
|cluster_id=chr20:42543441..42543497,+ | |||
|description=CAGE_peak_1_at_TOX2_5end | |description=CAGE_peak_1_at_TOX2_5end | ||
|id=chr20:42543441..42543497,+ | |id=chr20:42543441..42543497,+ | ||
Latest revision as of 07:18, 16 September 2015
| Short description: | p1@TOX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TOX2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000341197, ENST00000372992, NM_001098797, uc010ggo.2_5end |
| EntrezGene: | TOX2 |
| HGNC: | 16095 |
| UniProt: | G3XAC7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TOX2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 2.99e-17 | 121 |
| muscle cell | 2.88e-16 | 55 |
| smooth muscle cell | 2.68e-14 | 43 |
| smooth muscle myoblast | 2.68e-14 | 43 |
| muscle precursor cell | 7.83e-14 | 58 |
| myoblast | 7.83e-14 | 58 |
| multi-potent skeletal muscle stem cell | 7.83e-14 | 58 |
| electrically responsive cell | 1.56e-13 | 61 |
| electrically active cell | 1.56e-13 | 61 |
| fibroblast | 1.33e-11 | 76 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 4.44e-23 | 78 |
| vascular system | 4.44e-23 | 78 |
| vessel | 1.32e-22 | 68 |
| epithelial tube open at both ends | 2.91e-20 | 59 |
| blood vessel | 2.91e-20 | 59 |
| blood vasculature | 2.91e-20 | 59 |
| vascular cord | 2.91e-20 | 59 |
| cardiovascular system | 4.17e-18 | 109 |
| unilaminar epithelium | 2.66e-17 | 148 |
| epithelial vesicle | 2.76e-17 | 78 |
Showing 1 to 10 of 48 entries
